Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0768
(746 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 213 8e-56
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 213 1e-55
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 213 1e-55
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 213 1e-55
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 212 2e-55
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 212 2e-55
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 209 2e-54
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 209 2e-54
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 209 2e-54
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 196 1e-50
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 193 1e-49
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 185 3e-47
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 130 7e-31
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 96 3e-20
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 4e-20
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 79 2e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 4e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 59 3e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 58 6e-09
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 39 0.003
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 39 0.003
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.12
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 32 0.35
At2g35700.1 68415.m04378 AP2 domain-containing transcription fac... 32 0.46
At1g32190.1 68414.m03959 expressed protein 32 0.46
At5g04710.1 68418.m00480 aspartyl aminopeptidase, putative simil... 31 0.81
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 30 1.4
At5g29020.1 68418.m03592 hypothetical protein 29 3.3
At1g76240.1 68414.m08853 expressed protein contains Pfam profile... 29 3.3
At1g62420.1 68414.m07042 expressed protein contains Pfam profile... 28 5.7
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 27 10.0
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 27 10.0
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 10.0
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 27 10.0
At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive eff... 27 10.0
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 27 10.0
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 213 bits (521), Expect = 8e-56
Identities = 108/147 (73%), Positives = 115/147 (78%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIVLD P P DLAGRDLTDYL
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 191
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + + + +AEREIVRD+KEK
Sbjct: 192 MKILTERGYSFT-TSAEREIVRDVKEK 217
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYP 257
GILTLKYP
Sbjct: 65 GILTLKYP 72
Score = 65.3 bits (152), Expect = 4e-11
Identities = 36/73 (49%), Positives = 41/73 (56%)
Frame = +1
Query: 511 GDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXXXXXXTERGYSFTTNRRAGNRS*HQG 690
GDGVSHTVPIYEGYALPHAI TERGYSFTT+ +
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TERGYSFTTSAEREIVRDVKE 216
Query: 691 EAVYVALDFEQXM 729
+ Y+ALD+EQ M
Sbjct: 217 KLAYIALDYEQEM 229
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 213 bits (519), Expect = 1e-55
Identities = 107/147 (72%), Positives = 113/147 (76%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIVLD P P DLAGRDLTDYL
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYL 191
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + TAEREIVRDIKEK
Sbjct: 192 MKILT-ERGYMFTTTAEREIVRDIKEK 217
Score = 125 bits (301), Expect = 4e-29
Identities = 55/68 (80%), Positives = 62/68 (91%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 234 GILTLKYP 257
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 213 bits (519), Expect = 1e-55
Identities = 107/147 (72%), Positives = 113/147 (76%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIVLD P P DLAGRDLTDYL
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYL 191
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + TAEREIVRDIKEK
Sbjct: 192 MKILT-ERGYMFTTTAEREIVRDIKEK 217
Score = 125 bits (301), Expect = 4e-29
Identities = 55/68 (80%), Positives = 62/68 (91%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 234 GILTLKYP 257
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 213 bits (519), Expect = 1e-55
Identities = 107/147 (72%), Positives = 113/147 (76%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIVLD P P DLAGRDLTDYL
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYL 191
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + TAEREIVRDIKEK
Sbjct: 192 MKILT-ERGYMFTTTAEREIVRDIKEK 217
Score = 125 bits (301), Expect = 4e-29
Identities = 55/68 (80%), Positives = 62/68 (91%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 234 GILTLKYP 257
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 212 bits (517), Expect = 2e-55
Identities = 108/147 (73%), Positives = 114/147 (77%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIVLD P P DLAGRDLTD+L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHL 191
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + + + TAEREIVRD+KEK
Sbjct: 192 MKILTERGYSFT-TTAEREIVRDMKEK 217
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYP 257
GILTLKYP
Sbjct: 65 GILTLKYP 72
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/73 (49%), Positives = 40/73 (54%)
Frame = +1
Query: 511 GDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXXXXXXTERGYSFTTNRRAGNRS*HQG 690
GDGVSHTVPIYEGYALPHAI TERGYSFTT +
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKIL-TERGYSFTTTAEREIVRDMKE 216
Query: 691 EAVYVALDFEQXM 729
+ Y+ALDFEQ +
Sbjct: 217 KLSYIALDFEQEL 229
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 212 bits (517), Expect = 2e-55
Identities = 108/147 (73%), Positives = 114/147 (77%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIVLD P P DLAGRDLTD+L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHL 191
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + + + TAEREIVRD+KEK
Sbjct: 192 MKILTERGYSFT-TTAEREIVRDMKEK 217
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYP 257
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 209 bits (510), Expect = 2e-54
Identities = 108/147 (73%), Positives = 111/147 (75%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNV 131
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIVLD P P DLAGRDLTD L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSL 191
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + TAEREIVRDIKEK
Sbjct: 192 MKILT-ERGYMFTTTAEREIVRDIKEK 217
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYP 257
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 209 bits (510), Expect = 2e-54
Identities = 107/147 (72%), Positives = 112/147 (76%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNA 131
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIVLD P P DLAGRDLTD L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 191
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + + + TAEREIVRDIKEK
Sbjct: 192 MKILTERGYSFT-TTAEREIVRDIKEK 217
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYP 257
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 209 bits (510), Expect = 2e-54
Identities = 107/147 (72%), Positives = 112/147 (76%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNA 131
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIVLD P P DLAGRDLTD L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 191
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + + + TAEREIVRDIKEK
Sbjct: 192 MKILTERGYSFT-TTAEREIVRDIKEK 217
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYP 257
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 196 bits (478), Expect = 1e-50
Identities = 97/147 (65%), Positives = 109/147 (74%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+F
Sbjct: 73 PIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAF 132
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
P+MY+ IQAVLSLY+SGRTTGIVLD P P DLAGRDLT+YL
Sbjct: 133 PSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYL 192
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ T + +AEREIVRDIKEK
Sbjct: 193 TKIMMERGYTYT-TSAEREIVRDIKEK 218
Score = 120 bits (288), Expect = 1e-27
Identities = 52/68 (76%), Positives = 63/68 (92%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 234 GILTLKYP 257
GIL+LKYP
Sbjct: 66 GILSLKYP 73
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 193 bits (470), Expect = 1e-49
Identities = 97/147 (65%), Positives = 109/147 (74%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F+
Sbjct: 61 PMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDV 120
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYV++Q+VL LY+SGRTTG+VLD P P DL GRDLTDYL
Sbjct: 121 PAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYL 180
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
E + T + +AEREIVRDIKEK
Sbjct: 181 IEIMTERGYTYT-TSAEREIVRDIKEK 206
Score = 71.7 bits (168), Expect = 5e-13
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 248
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 249 KYP 257
K P
Sbjct: 59 KDP 61
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/73 (42%), Positives = 39/73 (53%)
Frame = +1
Query: 511 GDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXXXXXXTERGYSFTTNRRAGNRS*HQG 690
G+ VSHTVP+YEGYALPH I TERGY++TT+ +
Sbjct: 147 GERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIM-TERGYTYTTSAEREIVRDIKE 205
Query: 691 EAVYVALDFEQXM 729
+ YVALD+EQ M
Sbjct: 206 KLCYVALDYEQEM 218
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 185 bits (450), Expect = 3e-47
Identities = 92/147 (62%), Positives = 108/147 (73%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
P+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETF
Sbjct: 27 PMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFAV 86
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
P+MY+ +QA LSL+ASGRTTG VLD P + P DLAGR LT+YL
Sbjct: 87 PSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYL 146
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ R +AERE+VRDIKE+
Sbjct: 147 MK----IMMERGYTSAEREVVRDIKEQ 169
Score = 44.4 bits (100), Expect = 8e-05
Identities = 31/73 (42%), Positives = 37/73 (50%)
Frame = +1
Query: 511 GDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXXXXXXTERGYSFTTNRRAGNRS*HQG 690
GDGVS+ VPIYEG ALPHAI ERGY T+ R R +
Sbjct: 113 GDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMM-ERGY--TSAEREVVRDIKE- 168
Query: 691 EAVYVALDFEQXM 729
+ Y+ALD+EQ M
Sbjct: 169 QFGYIALDYEQEM 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +3
Query: 177 MVGMGQKDSYVGDEAQSKRGILTLKYP 257
MVGM + D +VGD+A+++ GILTL YP
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYP 27
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 130 bits (315), Expect = 7e-31
Identities = 67/158 (42%), Positives = 93/158 (58%)
Frame = +2
Query: 221 TEQKRYPDPQIPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 400
+E + D P+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 401 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVW 580
M + MFE +N +++ IQAVL+LYA G TG+V+D P P +
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRM 179
Query: 581 DLAGRDLTDYLHEDSSPSAATRSLPTAEREIVRDIKEK 694
++AGR +T YL + S + TA+ E VR+IKEK
Sbjct: 180 NVAGRHITAYLVDLLSRRGYAMN-KTADFETVREIKEK 216
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 242
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 243 TLKYP 257
+ YP
Sbjct: 67 DINYP 71
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 95.9 bits (228), Expect = 3e-20
Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWD-LAGRDLTDY 610
PA+++A VL+ +A+GR T +V+D S T P D + + V L G LTD
Sbjct: 154 PALFMAKNPVLTSFATGRATSLVVDCGGGSTTISP-VHDGYVLQKAVVSSPLGGEFLTDC 212
Query: 611 L 613
L
Sbjct: 213 L 213
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 155
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 95.1 bits (226), Expect = 4e-20
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FETFN
Sbjct: 89 PIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFETFNV 148
Query: 434 PAMYVAIQAVLSLYASGRT-----TGIVLDPATVSPTPCPSTRDTHSPTPSCVWD--LAG 592
P +Y+A+ +VL+L A T TG+V+D + P SC+ +AG
Sbjct: 149 PGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEG--YVIGSCIKSIPIAG 206
Query: 593 RDLTDYLHE 619
+D+T ++ +
Sbjct: 207 KDVTLFIQQ 215
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 66 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 152
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 79.4 bits (187), Expect = 2e-15
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 430
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 431 TPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDY 610
Y + QAVLSLYA GR +G +D P S ++L G +LT
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKL 176
Query: 611 LHEDSSPSAATRSLPTAEREIVRD 682
++ + + +L ++ E +++
Sbjct: 177 FAQELGKTNPSMNLSMSDVEKLKE 200
Score = 27.5 bits (58), Expect = 10.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 66 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 158
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 400
P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV---GMGQKDSYVGDEAQ 224
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + +D+ D+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 225 SKRGILT 245
KR + T
Sbjct: 65 GKRKLYT 71
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 64 PIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGF 123
Query: 434 PAMYVA-IQAVLSLYASGRTTGIVLDPATVS 523
++Y+A Q+++ LY + R +L S
Sbjct: 124 SSLYIAHPQSLVHLYEASRQPDSILSKTQCS 154
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 161
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 58.0 bits (134), Expect = 6e-09
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Frame = +2
Query: 245 PQIPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 421
P+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FE
Sbjct: 82 PRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFE 141
Query: 422 TFNTPAMYVAIQAVLS-----LYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDL 586
T+ PA+ + A S L+ + GIVL P + P S ++
Sbjct: 142 TYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNI 201
Query: 587 AGRDLTDYLHE 619
G +TDYL +
Sbjct: 202 GGYHVTDYLKQ 212
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 215
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +2
Query: 311 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 460
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 461 VLSLYASGRTTGIVLD 508
VL+LYA+ RT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +2
Query: 311 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 460
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 461 VLSLYASGRTTGIVLD 508
VL+LYA+ RT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 190 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 53
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 367 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSYHRYRAGPGDGVSHTVP 537
GSP+ +G + E+D D + NI+H + +H + A+ SY R GP D + P
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR---GPEDDENGRFP 147
>At2g35700.1 68415.m04378 AP2 domain-containing transcription
factor, putative pFAM domain (PF00847)
Length = 194
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 476 ASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
A+ I +D T SP+P P+ +T SP + D A DL D L
Sbjct: 124 AAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAFSDLPDLL 169
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 414 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCWTRRRC 521
C K S C P+ CS C +P P SCW +C
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCWKCLKC 379
>At5g04710.1 68418.m00480 aspartyl aminopeptidase, putative similar
to SP|Q9ULA0 Aspartyl aminopeptidase (EC 3.4.11.21)
{Homo sapiens}; contains Pfam profile PF02127:
Aminopeptidase I zinc metalloprotease (M18)
Length = 526
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 512 ATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYLHEDSSPSAAT 643
++VSP C S RD+ SP + G DL DYL+E + AT
Sbjct: 42 SSVSPILCTSHRDSRSPGSDSNASIVG-DLLDYLNESWTQFHAT 84
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 420 KHSTRPPCTSP--SKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRGIRTPPRH 569
K++ +P +P ++PC+ C R + + RC P R RGI PP +
Sbjct: 63 KYTKKPDPNAPKITRPCTECGRKFWSWKALFGHMRCHPER-QWRGINPPPNY 113
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 444 TSPSKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRGIRTPPRHPA 575
++P+KPC T PV PP +R+ RG+ P P+
Sbjct: 26 SNPAKPCGSRTLPVNPPYPTTGKRKRADPPKPSRGLSPNPTDPS 69
>At1g76240.1 68414.m08853 expressed protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function
Length = 308
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 450 PSKPCSRCTRPVVPPVSCWTRRRCLPHRAH 539
P+KPC R + P VS TR LP R+H
Sbjct: 12 PNKPCGRSSPSSKPRVSHHTRSISLPCRSH 41
>At1g62420.1 68414.m07042 expressed protein contains Pfam profile
PF04720: Protein of unknown function (DUF506)
Length = 465
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 153 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPSNTESSLTGMTWRRFG 305
G R + + M ++VGD + SKR ++ ++ L +W RFG
Sbjct: 84 GEERMRILSATMEVAGTFVGDISSSKRHLMAFLRNKGFDAGLCKSSWERFG 134
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 27.5 bits (58), Expect = 10.0
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +2
Query: 266 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 439
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 440 MYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPT 565
I +L + ++DP+ +S T P+ + + PT
Sbjct: 195 SLENIDHLLDF----SSLPPLIDPSFMSQTEQPNFKPINPPT 232
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 27.5 bits (58), Expect = 10.0
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +2
Query: 266 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 439
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 440 MYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPT 565
I +L + ++DP+ +S T P+ + + PT
Sbjct: 195 SLENIDHLLDF----SSLPPLIDPSFMSQTEQPNFKPINPPT 232
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 10.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 166 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 44
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 435 PPCTSPSKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRGIRTPPRHPASGT*P 590
P + P++P + P PPV + P + + G R PP P+S + P
Sbjct: 49 PSASQPTRPFTASGPPPAPPVGTMRPGQPSPFVSQIPGSRPPP--PSSNSFP 98
>At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive
effector-related similar to Endonuclease sen1
(Swiss-Prot:Q92355) [Schizosaccharomyces pombe]; similar
to tRNA-splicing endonuclease positive effector
(Swiss-Prot:Q00416) [Saccharomyces cerevisiae]
Length = 1090
Score = 27.5 bits (58), Expect = 10.0
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 326 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 505
L +PE+ P + P P + +FN P + AI A+G ++G+
Sbjct: 433 LNPSPEQFPSYEEQTPATPDCFTTSFVDHLHRSFNAPQL-AAIHWAAMHTAAGTSSGVKK 491
Query: 506 D---PATVSPTPCPSTRDTHS 559
P T+ P P T TH+
Sbjct: 492 QEPWPFTLVQGP-PGTGKTHT 511
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.5 bits (58), Expect = 10.0
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +2
Query: 278 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 457
+W +E + + + + P LL EA + PK+ E +++TF T ++ +
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPK 547
Query: 458 AVLSLYASGRTTGIVL 505
+ +A G VL
Sbjct: 548 LSRTDFAVAHYAGEVL 563
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,197,950
Number of Sequences: 28952
Number of extensions: 450734
Number of successful extensions: 1577
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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