Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0766
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    26   0.29 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    26   0.29 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.8  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   6.3  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 120 ILGDSGVGKTSLMNQFVNKKFSN 188
           ILG SG GKT+L+N       SN
Sbjct: 109 ILGSSGAGKTTLLNTLTFHTSSN 131


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 120 ILGDSGVGKTSLMNQFVNKKFSN 188
           ILG SG GKT+L+N       SN
Sbjct: 109 ILGSSGAGKTTLLNTLTFHTSSN 131


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 150 SLMNQFVNKKFSNQYKATIGADFLTKEVIVD 242
           +L+N  + K + N+Y+  I     ++E IVD
Sbjct: 484 ALINSILRKLYKNKYRKLIVDGKKSEEQIVD 514


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 619 AELYNEFPDQIQTEC 663
           AEL    PD + TEC
Sbjct: 61  AELKRHLPDALHTEC 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,950
Number of Sequences: 336
Number of extensions: 4093
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)