Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0766
(776 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 131 9e-32
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 112 6e-26
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 69 1e-12
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 69 1e-12
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 68 1e-12
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 66 4e-12
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 66 5e-12
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 60 3e-10
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 60 3e-10
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 54 2e-08
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 46 8e-06
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 44 2e-05
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 44 2e-05
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 44 2e-05
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 42 1e-04
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 42 1e-04
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 38 0.001
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 37 0.004
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 31 0.18
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 31 0.24
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 30 0.43
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 30 0.43
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 29 0.56
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 28 1.3
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 27 2.3
SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|c... 27 3.0
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 27 3.0
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 26 5.2
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 5.2
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 131 bits (317), Expect = 9e-32
Identities = 58/90 (64%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 436
+Q+WDTAGQERFQSLGVAFYRGADCCVLV+DV +F++L+SWRDEFLIQASP +P+ F
Sbjct: 59 LQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETF 118
Query: 437 PFVILGNKVDLD--NRAVSVKRGQQWARAR 520
PF++LGNKVD++ R VS + + +AR
Sbjct: 119 PFILLGNKVDVEEQKRMVSKSKALAFCQAR 148
Score = 97.1 bits (231), Expect = 2e-21
Identities = 44/57 (77%), Positives = 53/57 (92%)
Frame = +3
Query: 84 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIV 254
M+ +KK LLKVIILG+SGVGKTS+MNQ+VN+KFS YKATIGADFLTKEV+VDD++V
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVV 57
Score = 52.4 bits (120), Expect = 7e-08
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +1
Query: 511 QSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELYNEFPDQIQTE 660
Q++ +IPYFETSAKEA+NV+ AF+T+A+ AL ++ +F D I +
Sbjct: 146 QARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAADFTDPIHLD 195
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 112 bits (269), Expect = 6e-26
Identities = 51/96 (53%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 436
+Q+WDTAGQERFQSLG+AFYRGADCCV+V++V +F S+E+WR EFL Q S +D F
Sbjct: 59 LQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTS-QDECAF 117
Query: 437 PFVILGNKVDLD--NRAVSVKRGQQWARARTTSRIL 538
PF+I+GN++D D RAVS+ R + +++ S ++
Sbjct: 118 PFIIVGNQIDKDASKRAVSLHRALDYCKSKHGSNMI 153
Score = 97.5 bits (232), Expect = 2e-21
Identities = 43/57 (75%), Positives = 54/57 (94%)
Frame = +3
Query: 84 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIV 254
MS++K++ LKV+ILGDSGVGKT LMNQFVN+KFS +YKATIGADFLTK+V+VDD++V
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLV 57
Score = 32.3 bits (70), Expect = 0.080
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 532 YFETSAKEAVNVELAFQTIARNALAQETEA-ELYNEFPDQI 651
+FE SAKE NV F+T++R AL E+ + N+F + +
Sbjct: 154 HFEASAKENTNVTDLFETVSRLALENESSRDDFVNDFSEPL 194
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 68.5 bits (160), Expect = 1e-12
Identities = 33/100 (33%), Positives = 55/100 (55%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 436
++IWDTAGQER++SL +YR A+C ++V+D+T + + +SW E QA P+
Sbjct: 66 LEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQA----PEGI 121
Query: 437 PFVILGNKVDLDNRAVSVKRGQQWARARTTSRILRQVPKK 556
+ GNK+DL +V++ A A + + + K
Sbjct: 122 VIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAK 161
Score = 48.8 bits (111), Expect = 9e-07
Identities = 21/45 (46%), Positives = 35/45 (77%)
Frame = +3
Query: 111 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD 245
K+++LGDS VGK+SL+ +FV +F + ++TIGA FLT+ + +D+
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDE 60
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 532 YFETSAKEAVNVELAFQTIAR 594
+FETSAK A NV F IA+
Sbjct: 155 FFETSAKTAENVNELFTAIAK 175
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 68.5 bits (160), Expect = 1e-12
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 436
+QIWDTAGQE+F+S+ +YRGA VLV+DVT ++F+ L SW + A P
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMA----PSTI 119
Query: 437 PFVILGNKVDLDN-RAVSVKRGQQWARARTTS 529
V+ G+K DL N R VS + ++ + S
Sbjct: 120 CVVLAGSKSDLQNQRQVSTEEAAEFCSEKHIS 151
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +3
Query: 105 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 239
L+K+++ G SG GK+ L+ +FV ++ +Q T+G DF ++ + V
Sbjct: 9 LVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISV 53
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 68.1 bits (159), Expect = 1e-12
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 436
+QIWDTAGQERF+++ A+YRGA +L++DVT +F ++ +W AS +N
Sbjct: 60 LQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHAS----ENV 115
Query: 437 PFVILGNKVDL-DNRAVSVKRGQQWA 511
+++GNK D D R VS ++GQ A
Sbjct: 116 YKILIGNKCDCEDQRQVSFEQGQALA 141
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/51 (35%), Positives = 34/51 (66%)
Frame = +3
Query: 105 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVR 257
L+K++++GDSGVGK+ L+ +F F+ + TIG DF + + +D + ++
Sbjct: 9 LIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIK 59
Score = 35.1 bits (77), Expect = 0.011
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +1
Query: 526 IPYFETSAKEAVNVELAFQTIARNALAQETEAELYNEFPDQ 648
+ + E SAK VNV+ AF T+AR Q+ +AE NEF +Q
Sbjct: 146 VKFLEASAKTNVNVDEAFFTLAREIKKQKIDAE--NEFSNQ 184
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 66.5 bits (155), Expect = 4e-12
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +2
Query: 260 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFP 439
QIWDTAGQER++++ A+YRGA ++V+D+T ++F ++ W E A N
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHAD----SNIV 117
Query: 440 FVILGNKVDLDN-RAVSVKRGQQWARARTTSRI 535
+++GNK DL + RAVS + Q +A S I
Sbjct: 118 IMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFI 150
Score = 54.4 bits (125), Expect = 2e-08
Identities = 19/53 (35%), Positives = 40/53 (75%)
Frame = +3
Query: 105 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVRCK 263
L K +++GDSGVGK++L+ +F +F+ + K+TIG +F T+ +++D++ ++ +
Sbjct: 10 LFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQ 62
Score = 31.9 bits (69), Expect = 0.11
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 514 SKNDIPYFETSAKEAVNVELAFQTI 588
++N++ + ETSA +A NVE AFQT+
Sbjct: 143 AENNLSFIETSAMDASNVEEAFQTV 167
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 66.1 bits (154), Expect = 5e-12
Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 436
+Q+WDTAGQERF+SL ++ R + ++V+D+T N+F + E W ++ + D+
Sbjct: 62 LQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERG----DDV 117
Query: 437 PFVILGNKVDL-DNRAVSVKRGQQWAR 514
V++GNK DL D R V+ + G++ A+
Sbjct: 118 IIVLVGNKTDLADKRQVTQEEGEKKAK 144
Score = 58.8 bits (136), Expect = 8e-10
Identities = 25/49 (51%), Positives = 37/49 (75%)
Frame = +3
Query: 111 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVR 257
K++ LG+ VGKTSL+ +F+ +F N Y+ATIG DFL+K + ++DR VR
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVR 61
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 60.5 bits (140), Expect = 3e-10
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = +2
Query: 263 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 442
+WDTAGQE+ L +Y C +++FDVT+ T+K++ W + + R +N P
Sbjct: 62 VWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLV-----RVCENIPI 116
Query: 443 VILGNKVDLDNRAVSVK 493
V+ GNKVD+ R V K
Sbjct: 117 VLCGNKVDVKERKVKAK 133
Score = 35.5 bits (78), Expect = 0.009
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 111 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD 215
K++++GD G GKT+ + + + +F +Y AT+G +
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE 45
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 60.1 bits (139), Expect = 3e-10
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 436
+QIWDTAGQERF+++ ++YRGA ++V+DVT ++F +++ W E A +
Sbjct: 59 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA----VEGV 114
Query: 437 PFVILGNKVDL-DNRAVSVKRGQQWA 511
+++GNK D+ D + V +++A
Sbjct: 115 NRLLVGNKSDMVDKKVVEYSVAKEFA 140
Score = 45.2 bits (102), Expect = 1e-05
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = +3
Query: 84 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVR 257
M+ L K++++GDSGVGK+ L+ +F + ++ Y +TIG DF + ++ + V+
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVK 58
Score = 33.9 bits (74), Expect = 0.026
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +1
Query: 523 DIPYFETSAKEAVNVELAFQTIAR 594
+IP+ ETSAK++ NVE AF T++R
Sbjct: 144 NIPFLETSAKDSTNVEQAFLTMSR 167
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 54.0 bits (124), Expect = 2e-08
Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 436
+ + DTAGQE + ++ + R + +LV+++T+ ++F + ++ + L +D D F
Sbjct: 58 LDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQIL---RVKDKDTF 114
Query: 437 PFVILGNKVDLD-NRAVSVKRGQQWARA 517
P V++ NK DL+ R VS G+Q A++
Sbjct: 115 PVVLVANKCDLEAERVVSRAEGEQLAKS 142
Score = 35.1 bits (77), Expect = 0.011
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 111 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTK 227
K++++GD GVGK++L Q + F ++Y TI + K
Sbjct: 10 KLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKK 48
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 532 YFETSAKEAVNVELAFQTIAR 594
Y ETSAK +NVE AF ++ R
Sbjct: 147 YVETSAKLRLNVEEAFYSLVR 167
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 45.6 bits (103), Expect = 8e-06
Identities = 26/101 (25%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 436
+ +WDTAGQE ++ L Y A ++ F + +P+ SLE+ +++ + + P N
Sbjct: 58 LALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPD---SLENVSTKWIEEINTLCP-NV 113
Query: 437 PFVILGNKVDLDNRAVSV----KRGQQWARARTTSRILRQV 547
PF+++G K DL + V++ +R Q + +++ + +++
Sbjct: 114 PFILVGMKADLRSDPVAIEEMRRRNQNFVKSQQAELVAQRI 154
Score = 32.3 bits (70), Expect = 0.080
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 111 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVR 257
K++++GD GKTSL++ F F +Y T+ ++++ + VD + V+
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQ 57
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 44.4 bits (100), Expect = 2e-05
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDN 433
+ +WDTAGQE + L Y + ++ F V AP + ++ E W E L S N
Sbjct: 56 LALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCS-----N 110
Query: 434 FPFVILGNKVDLDN 475
P +++G KVDL N
Sbjct: 111 LPILLVGCKVDLRN 124
Score = 31.1 bits (67), Expect = 0.18
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +3
Query: 99 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVRCKYGILL 278
+L K++I+GD GKT L+ F F Y T+ +++ +V VD R +
Sbjct: 4 ELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHIELALWDTA 62
Query: 279 AKNGSNRLE*LS 314
+ +RL LS
Sbjct: 63 GQEDYDRLRPLS 74
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 44.0 bits (99), Expect = 2e-05
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFP 439
+I DTAGQ+ + L G VLV+ +T+ ++F+ ++ RD+ L + + P
Sbjct: 57 EIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKIL---NHTGTEWVP 113
Query: 440 FVILGNKVDLD-NRAVSVKRGQQWA 511
V++GNK DL RAV+ + G+ A
Sbjct: 114 IVVVGNKSDLHMQRAVTAEEGKALA 138
Score = 30.3 bits (65), Expect = 0.32
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 111 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 218
++ +LG VGK+SL Q+V F Y TI F
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF 43
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 44.0 bits (99), Expect = 2e-05
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 78 CKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 242
C S +K + K++ILGD GKTSL+N F F Y+ TI +++ ++ VD
Sbjct: 4 CFGSKKKPIYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYI-HDIFVD 57
Score = 30.7 bits (66), Expect = 0.24
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 436
+ +WDTAGQE + L Y ++ F V + + SLE+ ++L + S P
Sbjct: 63 LSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRD---SLENVITKWLPEVSSNCP-GV 118
Query: 437 PFVILGNKVDL 469
V++ K DL
Sbjct: 119 KLVLVALKCDL 129
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 93 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 239
+ + +KV ++GDS +GKTSLM +V F + T+G +F+ K + +
Sbjct: 6 KNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISI 54
Score = 30.3 bits (65), Expect = 0.32
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 263 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW 388
IWD GQ F ++ A + +FD++ +T S++ W
Sbjct: 63 IWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEW 104
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 41.5 bits (93), Expect = 1e-04
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDN 433
+ +WDTAGQE + L Y ++ +L F + P + ++ E W E + PR
Sbjct: 66 LALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPE-VQHFCPRT--- 121
Query: 434 FPFVILGNKVDL--DNRAVSVKRGQ 502
P V++G K DL D A V R Q
Sbjct: 122 -PIVLVGLKADLRKDRNATEVLRTQ 145
Score = 35.9 bits (79), Expect = 0.006
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 81 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLT 224
K S+ + K++++GD G GKT L+ F + F +Y T+ +++T
Sbjct: 6 KSGSKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYIT 53
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 38.3 bits (85), Expect = 0.001
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +2
Query: 263 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFP 439
++DTAGQE + L Y D ++ F VT+P +F+++ E W E + P P
Sbjct: 55 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPE-VHHHCP----GVP 109
Query: 440 FVILGNKVDL-DNRAVSVKRGQQ 505
+I+G ++DL D+ +V K +Q
Sbjct: 110 CLIVGTQIDLRDDPSVQQKLARQ 132
Score = 35.5 bits (78), Expect = 0.009
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 108 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD 245
+K +++GD VGKT L+ + KF + Y T+ ++ +I D+
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDE 49
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 36.7 bits (81), Expect = 0.004
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 257 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDN 433
+ +WDTAGQE + L Y + ++ F V +P++ ++ E W E L S +
Sbjct: 56 LALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCS-----S 110
Query: 434 FPFVILGNKVDLDN 475
P +++ K DL N
Sbjct: 111 LPILLVACKADLRN 124
Score = 31.5 bits (68), Expect = 0.14
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +3
Query: 99 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVRCKYGILL 278
+L K++I+GD GKT L+ F F Y T+ +++ +V VD R V
Sbjct: 4 ELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHVELALWDTA 62
Query: 279 AKNGSNRLE*LS 314
+ +RL LS
Sbjct: 63 GQEDYDRLRPLS 74
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 31.1 bits (67), Expect = 0.18
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 81 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNK 176
K SS+K + L ++++GD G+G+T+ +N K
Sbjct: 44 KKSSKKGIPLNLMVVGDVGLGRTAFINTLCEK 75
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 30.7 bits (66), Expect = 0.24
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 93 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 218
R+ V++LG+SG GK++L+N +N+ + ++ DF
Sbjct: 91 RQGFNFNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDF 132
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 29.9 bits (64), Expect = 0.43
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 78 CKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFS 185
CK RK + V ILG S GK+SL+N N++ S
Sbjct: 232 CKEVLRKGI--NVAILGPSNAGKSSLINLLANRRIS 265
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 29.9 bits (64), Expect = 0.43
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = +3
Query: 93 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD 245
R + + +I++G+S +GKT+ +N F+ +N ++ DF+ + + D
Sbjct: 114 RNGIDINLIVVGESSLGKTTFVNSFLQSNDTN-FRPKKTMDFVEHKATLSD 163
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 29.5 bits (63), Expect = 0.56
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +2
Query: 263 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 442
+WD GQ++ + L ++ G + V D N + R E S R+ +
Sbjct: 69 VWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSN---RISEARQELHRIISDREMRDCLL 125
Query: 443 VILGNKVDL 469
++L NK DL
Sbjct: 126 LVLANKQDL 134
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 81 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD 215
K+ SR + +++ G+SG+GKT+ F N FS K+ +G +
Sbjct: 20 KIVSRNGVAFTLMLCGESGLGKTT----FCNTLFSTTIKSHMGPE 60
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 108 LKVIILGDSGVGKTSLMNQFVNK 176
++V+I GD GVGK+SL++ + +
Sbjct: 4 VRVVICGDQGVGKSSLISALIQE 26
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 69 KLLCKMSSRKKLL--LKVIILGDSGVGKTSLMNQFVNK 176
K L S++KKL L V ++G VGK+S++N VN+
Sbjct: 255 KSLKSYSAKKKLKSSLTVGVIGYPNVGKSSVINALVNR 292
>SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 585
Score = 27.1 bits (57), Expect = 3.0
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = -2
Query: 478 TIIQVDFVSQYYEGEIIRVTR*CLYQEFVSPTL*GLK--RVGGSYVKN*YAAIRPTIESY 305
++ V FV + R T +Y V + GLK + +YV+N I E Y
Sbjct: 166 SLFHVVFVLNVPTATVYRPTVNTMYDHIVVKLVTGLKYEQAKRNYVENECIHILKLTEKY 225
Query: 304 SKRLEPF--LASSIPYLHRTILSSTITSF 224
S + PF A+ IP+ H + S T++
Sbjct: 226 SSQNVPFDVYAAQIPH-HSNLASVLATTY 253
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +3
Query: 75 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 233
+ + K+ ++V++LG GKT+++ +N+ N+ T G T EV
Sbjct: 6 ILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDV-NEVSPTFGFQIRTLEV 57
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 260 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPN 364
+IWD +++ +L V + G D VL ++ PN
Sbjct: 317 RIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPN 351
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 165 FVNKKFSNQYKATIGADFLTKEVIVDDRIVRCKYGILLAKNGSN 296
FVN + S++ TIG D T + + D+ +C G+LLA+ S+
Sbjct: 726 FVNNELSSEPIETIGVDKYTTFLFISDK--KC-VGLLLAERISS 766
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,340,520
Number of Sequences: 5004
Number of extensions: 70211
Number of successful extensions: 277
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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