Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0765
(561 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0018 + 3016137-3016186,3016529-3016776,3018717-3018811,302... 40 0.002
03_02_0015 + 4965894-4966214,4966339-4966387,4966504-4966890,496... 39 0.003
08_02_0622 + 19422001-19422330,19422411-19422459,19422552-194227... 38 0.004
04_04_1399 - 33249210-33249359,33249521-33249597,33249735-332498... 38 0.007
01_05_0557 + 23243507-23243855,23243952-23244331,23244866-232449... 36 0.022
06_01_0319 - 2292071-2292208,2292342-2292418,2292758-2293321,229... 35 0.039
03_02_0014 + 4955759-4956106,4956229-4956277,4956372-4956579,495... 35 0.051
03_02_0013 - 4921925-4922077,4922176-4922252,4922360-4922445,492... 34 0.089
03_02_0012 - 4914223-4914468,4914511-4914587,4914671-4914732,491... 33 0.16
02_01_0330 + 2325504-2325739,2326749-2327622 32 0.36
11_06_0522 + 24568070-24568571,24568710-24569825,24569968-24570122 29 1.9
07_01_0312 + 2214050-2214556 29 1.9
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 29 3.4
05_01_0234 - 1743784-1744017,1748103-1749068 28 5.9
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 28 5.9
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 28 5.9
08_01_0506 - 4400776-4400937,4401164-4401253,4401334-4401546,440... 27 7.7
07_03_0984 - 23131468-23131679,23132082-23132209,23132300-231323... 27 7.7
02_05_0311 + 27782110-27782326,27784121-27784268,27784394-277844... 27 7.7
>09_02_0018 +
3016137-3016186,3016529-3016776,3018717-3018811,
3020025-3020330,3021288-3021336,3021436-3021637,
3023364-3023532,3023605-3023634,3023742-3023807,
3025313-3025378,3029404-3029464,3029592-3029719,
3030716-3030757,3031074-3031190,3031280-3031339
Length = 562
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 339 FTITMVTYTI-SMSMALIFAAKEKYEIDANQELLALGASNVFASFF 473
F I ++ + S+ +A AAK YE+D N+EL LG +N+ SFF
Sbjct: 396 FVILLIMKNLESVGIAKALAAKNGYELDPNKELFGLGIANICGSFF 441
>03_02_0015 +
4965894-4966214,4966339-4966387,4966504-4966890,
4966976-4967034,4967128-4967241,4967344-4967460,
4967558-4967684,4967764-4968050,4968148-4968338,
4968801-4968886,4968975-4969051,4969161-4969304
Length = 652
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 255 SLVGHIPTGLPVPQVPAIELIPQVAVDAFTITMVTYTISMSMALI----FAAKEKYEIDA 422
++V ++ G+ P I + F I +V IS++ A+ FA Y+ID
Sbjct: 309 AIVKNVKKGINPPSASLIFFTGPYLLKGFKIGVVAGMISLTEAIAVGRTFAGLNDYQIDG 368
Query: 423 NQELLALGASNVFAS 467
N+E+LALG NV S
Sbjct: 369 NKEMLALGTMNVVGS 383
>08_02_0622 +
19422001-19422330,19422411-19422459,19422552-19422759,
19422832-19423006,19423101-19423166,19423264-19423377,
19423473-19423589,19423677-19423803,19423893-19424179,
19424279-19424469,19424571-19424656,19424749-19424825,
19425057-19425200
Length = 656
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +3
Query: 258 LVGHIPTGLPVPQVPAIELIPQVAVDAFTITMVTYTISMSMALI----FAAKEKYEIDAN 425
+V HI G+ V I F I +++ I ++ A+ FAA + Y++D N
Sbjct: 314 IVNHIKKGINPSSVHKIYFTGPFVAKGFKIGVISAMIGLTEAVAIGRTFAALKDYQLDGN 373
Query: 426 QELLALGASNVFAS 467
+E++ALG N+ S
Sbjct: 374 KEMVALGTMNIAGS 387
>04_04_1399 -
33249210-33249359,33249521-33249597,33249735-33249814,
33249904-33250094,33250183-33250469,33250595-33250721,
33250878-33250994,33251085-33251198,33251510-33251671,
33252909-33252974,33253098-33253269,33253377-33253584,
33253728-33253776,33254132-33254305
Length = 657
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +3
Query: 255 SLVGHIPTGLPVPQVPAIELIPQ---VAVDAFTIT-MVTYTISMSMALIFAAKEKYEIDA 422
S++G + GL P + PQ + V +T +++ T +++ FA+ + Y++D
Sbjct: 314 SIIGQLKCGLNRPSWDKLLFDPQYLGLTVKTGLVTGIISLTEGVAVGRTFASLKDYQVDG 373
Query: 423 NQELLALGASNVFAS 467
N+E++A+G N+ S
Sbjct: 374 NKEMMAIGLMNIVGS 388
>01_05_0557 +
23243507-23243855,23243952-23244331,23244866-23244931,
23245023-23245136,23245226-23245342,23245444-23245570,
23245660-23246486
Length = 659
Score = 35.9 bits (79), Expect = 0.022
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 258 LVGHIPTGLPVPQVPAIELIPQ---VAVDA-FTITMVTYTISMSMALIFAAKEKYEIDAN 425
+VG + G+ + ++ P+ VA+ A F M+ +++ FAA +K ID N
Sbjct: 303 IVGTLKRGINPSSISQLKFQPEYVGVAMKAGFVSGMLALAEGVAVGRSFAAMKKERIDGN 362
Query: 426 QELLALGASNVFASF 470
+E++A G N+ SF
Sbjct: 363 KEMVAFGLMNLIGSF 377
>06_01_0319 -
2292071-2292208,2292342-2292418,2292758-2293321,
2293978-2294104,2294207-2294323,2294440-2294547,
2296567-2296804,2296915-2297122,2297199-2297247,
2297384-2297728
Length = 656
Score = 35.1 bits (77), Expect = 0.039
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 255 SLVGHIPTGLPVPQVPAIELIPQVAVDAFTITMVTYTISMSMALI----FAAKEKYEIDA 422
S++G +P GL P + A ++T +S++ + FA+ Y++D
Sbjct: 315 SVIGDLPKGLNPPSANMLTFSGSYVGLALNTGIMTGILSLTEGIAVGRTFASINNYQVDG 374
Query: 423 NQELLALGASNVFAS 467
N+E++A+G N+ S
Sbjct: 375 NKEMMAIGVMNMAGS 389
>03_02_0014 +
4955759-4956106,4956229-4956277,4956372-4956579,
4956700-4956874,4956981-4957046,4957150-4957263,
4957366-4957482,4957589-4957715,4957826-4958112,
4958209-4958399,4958937-4959022,4959117-4959193,
4959330-4959473
Length = 662
Score = 34.7 bits (76), Expect = 0.051
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 258 LVGHIPTGLPVPQVPAIELIPQVAVDAFTITMVTYTISMSMALI----FAAKEKYEIDAN 425
+V +I G+ P I + F I ++ I ++ A+ FA + Y+ID N
Sbjct: 320 IVKYIKKGINPPSASLIYFSGPNLMKGFRIGVIAGMIGLTEAIAIGRTFAGLKDYKIDGN 379
Query: 426 QELLALGASNVFAS 467
+E++ALG N+ S
Sbjct: 380 KEMVALGTMNIVGS 393
>03_02_0013 -
4921925-4922077,4922176-4922252,4922360-4922445,
4922527-4922720,4922829-4923115,4923219-4923345,
4923586-4923816,4923982-4924047,4925300-4925474,
4925563-4925770,4925886-4925934,4926249-4926578
Length = 660
Score = 33.9 bits (74), Expect = 0.089
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 327 AVDAFTITMVTYTISMSMALIFAAKEKYEIDANQELLALGASNVFAS 467
A A ++ T ++++ FA+ Y++D N+E++A+G SNV S
Sbjct: 341 AKTAIICAVIALTEAIAVGRSFASIRGYKLDGNKEMIAMGCSNVAGS 387
>03_02_0012 -
4914223-4914468,4914511-4914587,4914671-4914732,
4914825-4915018,4915153-4915439,4915520-4915646,
4916216-4916446,4917210-4917384,4917461-4917668,
4917745-4917793,4918016-4918300
Length = 646
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +3
Query: 258 LVGHIPTGLPVPQVPAIELIPQVAVDAFTITMVTYTISMSMALI----FAAKEKYEIDAN 425
++ + +G+ V I+L A + I +V I+++ A+ F+A Y +D N
Sbjct: 277 IIQKVNSGINASSVEQIDLKGGYAAECAKIALVCAVIALTEAVAVGRSFSAINGYRLDGN 336
Query: 426 QELLALGASNVFAS 467
+E++A+G N+ S
Sbjct: 337 KEMVAMGFMNIAGS 350
>02_01_0330 + 2325504-2325739,2326749-2327622
Length = 369
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 186 YRNWHSTAFTHPRLKQFIVQSYDDASDKRYHE 91
Y+NW S A HP LK ++ +YH+
Sbjct: 280 YKNWQSRALQHPLLKDHLINRRSSYGRDKYHQ 311
>11_06_0522 + 24568070-24568571,24568710-24569825,24569968-24570122
Length = 590
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 174 HSTAFTHPRLKQFIVQSYDDASDKRYHERSPVQVRKIFHHLXYCKDDFIVPGRL 13
++ +F HP+ + + YD S Y E P++ + F+ Y D I PG L
Sbjct: 396 NNVSFAHPKTTALLERYYDGTSKGVYTEDFPIRPPRPFN---YTNRDLIPPGPL 446
>07_01_0312 + 2214050-2214556
Length = 168
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 243 AIRHSLVGHIPTGLPVPQVPAIELIPQVAVDA 338
A RH P +PVP VPA+ L P A+ A
Sbjct: 27 AARHLADATPPAAVPVPTVPAVTLPPMPAIPA 58
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 240 GAIRHSLVGHIPTGLPVPQVPAIELIPQVAVDA 338
G + HS V +P PVP VPA+ P A A
Sbjct: 296 GHLPHSQVPPVPPSAPVPSVPALPRDPYYAPPA 328
>05_01_0234 - 1743784-1744017,1748103-1749068
Length = 399
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 136 ELLKPWVSKRSRVPVPVELLAIVVGTLVS 222
+L + W + + PV++LA+VV TL++
Sbjct: 357 QLYRDWAEAKKYMDTPVKILALVVSTLLA 385
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 55 VVKNLPNLNWAAFVISLITCIVIAL 129
V NLPN NW+ + ++ C+ +AL
Sbjct: 281 VTLNLPN-NWSTAAVKIVLCVALAL 304
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +2
Query: 278 RPSGAASTRHRADPAS-GRGRLHHNDGDLYHIDVHGFNIRGQGEIRDRR 421
R G HR D G R HH D YH D G++ +G D R
Sbjct: 1294 RYDGHDRDHHRHDRRHHGHDRRHHFDDRGYHYDDRGYHYDDRGHYFDDR 1342
>08_01_0506 -
4400776-4400937,4401164-4401253,4401334-4401546,
4401725-4401817,4402357-4402551,4402643-4402735,
4403554-4403649,4404186-4404633,4405078-4405745,
4406822-4406884,4408650-4408847,4409265-4409982,
4410447-4410580
Length = 1056
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 257 FGRT-YTDRPSGAASTRHRADPASGRGRLHHNDGDLYHIDVHGFNIRGQGEIRD 415
FGRT Y RP+ AA R P+SG G + + + +HG N+ Q +++
Sbjct: 29 FGRTRYFSRPAFAAGGRQDYSPSSGMG---VSKTGAFRLGLHG-NLNVQSSVQE 78
>07_03_0984 -
23131468-23131679,23132082-23132209,23132300-23132365,
23134421-23134515,23135292-23135340,23135428-23135487,
23135580-23135701,23135799-23135840,23135944-23135992,
23136095-23136166,23136638-23136738,23136835-23136910,
23137002-23137081,23137196-23137307,23137391-23137454,
23137540-23137603,23138544-23138570
Length = 472
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +1
Query: 34 VVFTIVEVVKNLPNLNWAAFVISLITCIVIALNNELLKPWVSKRSRVPVPVELLAIVVGT 213
V++ I+ + K L + WAAF++ C LN P + P+ ++AIV+
Sbjct: 166 VLYRII-LKKKLSEIQWAAFILLCAGCTTAQLN-----PSSDHVLQTPIQGWVMAIVM-A 218
Query: 214 LVSKFGGL 237
L+S F G+
Sbjct: 219 LLSGFAGV 226
>02_05_0311 +
27782110-27782326,27784121-27784268,27784394-27784478,
27784555-27784650,27785666-27785731,27785900-27785998,
27786145-27786258,27786468-27786578,27786672-27786734,
27786816-27786908,27787960-27788073,27788440-27788505,
27788782-27788994,27789086-27789116,27789459-27791587
Length = 1214
Score = 27.5 bits (58), Expect = 7.7
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 278 RPSGA-ASTRHRADPASGRGRLHHNDGDLYHIDVHGFNIRGQGEIRDRRQSRIISAWSQ* 454
R SGA + R RA PA+ G + DGD + ++ Q + RQSR +
Sbjct: 15 RQSGAMVAERQRAKPAARSGVMADEDGDSDKFEEEEWDDDAQSQRGGVRQSRQAKWGNGF 74
Query: 455 RVRFVLLPAYLSVPVCRAV 511
+ + YL + RA+
Sbjct: 75 MILMYIFETYLDIRQHRAL 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,358,090
Number of Sequences: 37544
Number of extensions: 290813
Number of successful extensions: 1032
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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