Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0765
         (561 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.0  
AF457560-1|AAL68790.1|   56|Anopheles gambiae hypothetical prote...    23   6.8  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 484 PFCASLSRCTXGFEGQWXEN 543
           P C S SR T  F  QW  N
Sbjct: 559 PLCGSASRQTQTFTSQWYLN 578


>AF457560-1|AAL68790.1|   56|Anopheles gambiae hypothetical protein
           13 protein.
          Length = 56

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +1

Query: 67  LPNLNWAAFVISLITCIVIALNNELLKPWVSKRS 168
           + N+ +A  ++ L+ C+V    NE+++  V KRS
Sbjct: 1   MKNVFFALLLVVLVCCLVSVQGNEIIQN-VVKRS 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,667
Number of Sequences: 2352
Number of extensions: 10257
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)