Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0765
(561 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 23 2.1
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 2.8
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 8.5
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 8.5
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 8.5
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 8.5
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 8.5
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 8.5
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 8.5
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 8.5
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 8.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.5
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 8.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.5
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 325 TCGISSMAGTCGTGRPVGIC 266
+CG++ + TC GR IC
Sbjct: 256 SCGVADLIATCYGGRNRKIC 275
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.6 bits (46), Expect = 2.8
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 91 FVISLITCIVIALNNELLKPWVSKRSRVPVPVELLAIVVGTLVSKFGGLKEQFGIVW 261
FV ++ITCIVI W + + P L + V L+ GL + + W
Sbjct: 48 FVGNIITCIVI---------WRNPSMQTPTNYYLFNLAVSDLLFLILGLPFELSVFW 95
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 151 WVSKRSRVPVPVELL 195
W+ +RSR+ PV +
Sbjct: 443 WIDRRSRIVFPVAFI 457
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.0 bits (42), Expect = 8.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 172 VPVPVELLAIVVGTLVSKFGGLK 240
+P V LL + TLV+ F GLK
Sbjct: 228 IPGRVALLVTSMLTLVTMFTGLK 250
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 105 MVRPWVPMRGQVP 117
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 105 MVRPWVPMRGQVP 117
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 105 MVRPWVPMRGQVP 117
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 105 MVRPWVPMRGQVP 117
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 105 MVRPWVPMRGQVP 117
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 105 MVRPWVPMRGQVP 117
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 105 MVRPWVPMRGQVP 117
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 354 MVRPWVPMRGQVP 366
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 354 MVRPWVPMRGQVP 366
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 354 MVRPWVPMRGQVP 366
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 354 MVRPWVPMRGQVP 366
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 354 MVRPWVPMRGQVP 366
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 354 MVRPWVPMRGQVP 366
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 353 MVRPWVPMRGQVP 365
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/46 (19%), Positives = 21/46 (45%)
Frame = +3
Query: 318 PQVAVDAFTITMVTYTISMSMALIFAAKEKYEIDANQELLALGASN 455
P+V +DA T +Y + + + + K+ + ++ L + N
Sbjct: 277 PEVWIDAVTQIFFSYALGLGALVALGSYNKFNNNVYKDALIVCTVN 322
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/46 (19%), Positives = 21/46 (45%)
Frame = +3
Query: 318 PQVAVDAFTITMVTYTISMSMALIFAAKEKYEIDANQELLALGASN 455
P+V +DA T +Y + + + + K+ + ++ L + N
Sbjct: 330 PEVWIDAVTQIFFSYALGLGALVALGSYNKFNNNVYKDALIVCTVN 375
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 338 MVRPWVPMRGQVP 350
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 139 LLKPWVSKRSRVP 177
+++PWV R +VP
Sbjct: 354 MVRPWVPMRGQVP 366
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,258
Number of Sequences: 438
Number of extensions: 3351
Number of successful extensions: 26
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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