Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0765
(561 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g13550.1 68418.m01565 sulfate transporter family protein simi... 53 2e-07
At3g12520.1 68416.m01558 sulfate transporter family protein simi... 52 2e-07
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 41 5e-04
At1g22150.1 68414.m02769 sulfate transporter (Sultr1;3) identica... 40 9e-04
At4g08620.1 68417.m01419 sulfate transporter identical to sulfat... 40 0.001
At5g10180.1 68418.m01178 sulfate transporter identical to sulfat... 38 0.006
At1g78000.2 68414.m09090 sulfate transporter (Sultr1;2) identica... 38 0.006
At1g78000.1 68414.m09089 sulfate transporter (Sultr1;2) identica... 38 0.006
At3g15990.1 68416.m02023 sulfate transporter, putative similar t... 37 0.008
At1g77990.1 68414.m09088 sulfate transporter identical to sulfat... 31 0.53
At4g11820.2 68417.m01882 hydroxymethylglutaryl-CoA synthase / HM... 29 2.1
At1g20230.1 68414.m02527 pentatricopeptide (PPR) repeat-containi... 29 2.1
At4g22850.1 68417.m03300 expressed protein 28 4.9
At3g27040.1 68416.m03383 meprin and TRAF homology domain-contain... 28 4.9
At2g26750.1 68415.m03208 epoxide hydrolase, putative strong simi... 27 8.6
At2g26740.1 68415.m03207 epoxide hydrolase, soluble (sEH) identi... 27 8.6
>At5g13550.1 68418.m01565 sulfate transporter family protein similar
to sulfate transporter [Arabidopsis thaliana]
GI:3777483; contains Pfam profiles PF00916: Sulfate
transporter family, PF01740: STAS domain
Length = 685
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 SLVGHIPTGLPVPQVP-AIELIPQVAVDAFTITMVTYTISMSMALIFAAKEKYEIDANQE 431
SLVG IP GLP P + + + + IT V S+ +A AAK +YE+D+N E
Sbjct: 309 SLVGEIPQGLPTFSFPRSFDHAKTLLPTSALITGVAILESVGIAKALAAKNRYELDSNSE 368
Query: 432 LLALGASNVFASFF 473
L LG +N+ S F
Sbjct: 369 LFGLGVANILGSLF 382
>At3g12520.1 68416.m01558 sulfate transporter family protein similar
to sulfate transporter [Arabidopsis thaliana]
GI:3777483; contains Pfam profiles PF00916: Sulfate
transporter family, PF01740: STAS domain
Length = 677
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 SLVGHIPTGLPVPQVP-AIELIPQVAVDAFTITMVTYTISMSMALIFAAKEKYEIDANQE 431
+LVG IP GLP P + + + + IT V S+ +A AAK +YE+D+N E
Sbjct: 296 TLVGDIPQGLPKFSFPKSFDHAKLLLPTSALITGVAILESVGIAKALAAKNRYELDSNSE 355
Query: 432 LLALGASNVFASFF 473
L LG +N+F S F
Sbjct: 356 LFGLGVANIFGSLF 369
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = +3
Query: 243 AIRH--SLVGHIPTGLPVPQVPAIEL----IPQVAVDAFTITMVTYTISMSMALIFAAKE 404
A RH S++G +P GL P ++ + VA +V+ T +++ FAA +
Sbjct: 279 AERHGISVIGKLPEGLNPPSWNMLQFHGSHLALVAKTGLVTGIVSLTEGIAVGRTFAALK 338
Query: 405 KYEIDANQELLALGASNVFAS 467
Y +D N+E++A+G NV S
Sbjct: 339 NYHVDGNKEMIAIGLMNVVGS 359
>At1g22150.1 68414.m02769 sulfate transporter (Sultr1;3) identical
to sulfate tansporter Sultr1;3 [Arabidopsis thaliana]
GI:10716805; contains Pfam profile PF00916: Sulfate
transporter family; contains Pfam profile PF01740: STAS
domain; contains TIGRfam profile TIGR00815: sulfate
permease
Length = 656
Score = 40.3 bits (90), Expect = 9e-04
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +3
Query: 258 LVGHIPTGLPVPQVPAIELIPQVAVDAFTITMVTYTISMSMALI----FAAKEKYEIDAN 425
+V H+ GL + I + F I +V+ ++++ A+ FAA + Y+ID N
Sbjct: 314 IVKHLDKGLNPSSLRLIYFSGDYLLKGFRIGVVSGMVALTEAVAIGRTFAAMKDYQIDGN 373
Query: 426 QELLALGASNVFAS 467
+E++ALGA NV S
Sbjct: 374 KEMVALGAMNVIGS 387
>At4g08620.1 68417.m01419 sulfate transporter identical to sulfate
transporter [Arabidopsis thaliana] GI:3777483
Length = 649
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3
Query: 351 MVTYTISMSMALIFAAKEKYEIDANQELLALGASNVFAS 467
MV T ++++A FAA + Y+ID N+E++ALG NV S
Sbjct: 341 MVALTEAVAIARTFAAMKDYQIDGNKEMIALGTMNVVGS 379
>At5g10180.1 68418.m01178 sulfate transporter identical to sulfate
transporter [Arabidopsis thaliana] GI:2114104
Length = 677
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +3
Query: 261 VGHIPTGLPVPQVPAIEL----IPQVAVDAFTITMVTYTISMSMALIFAAKEKYEIDANQ 428
V HI GL + ++ + Q+A I +V T ++++ FA + Y +D N+
Sbjct: 337 VRHIKGGLNPMSIQDLDFNTPHLGQIAKIGLIIAIVALTEAIAVGRSFAGIKGYRLDGNK 396
Query: 429 ELLALGASNVFASF 470
E++A+G NV SF
Sbjct: 397 EMVAIGFMNVLGSF 410
>At1g78000.2 68414.m09090 sulfate transporter (Sultr1;2) identical
to sulfate transporter Sultr1;2 [Arabidopsis thaliana]
GI:7768660; contaisn Pfam profiles PF00916: Sulfate
transporter family and PF01740: STAS domain; contains
TIGRfam profile TIGR00815: sulfate permease
Length = 653
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 351 MVTYTISMSMALIFAAKEKYEIDANQELLALGASNVFAS 467
MV T ++++ FAA + Y+ID N+E++ALG NV S
Sbjct: 346 MVALTEAVAIGRTFAAMKDYQIDGNKEMVALGMMNVVGS 384
>At1g78000.1 68414.m09089 sulfate transporter (Sultr1;2) identical
to sulfate transporter Sultr1;2 [Arabidopsis thaliana]
GI:7768660; contaisn Pfam profiles PF00916: Sulfate
transporter family and PF01740: STAS domain; contains
TIGRfam profile TIGR00815: sulfate permease
Length = 653
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 351 MVTYTISMSMALIFAAKEKYEIDANQELLALGASNVFAS 467
MV T ++++ FAA + Y+ID N+E++ALG NV S
Sbjct: 346 MVALTEAVAIGRTFAAMKDYQIDGNKEMVALGMMNVVGS 384
>At3g15990.1 68416.m02023 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 653
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = +3
Query: 255 SLVGHIPTGLPVPQVPAIELIPQ---VAVDAFTIT-MVTYTISMSMALIFAAKEKYEIDA 422
S +GH+P GL P + + +A+ IT +++ T +++ FA+ + Y+++
Sbjct: 308 SFIGHLPKGLNPPSLNMLYFSGAHLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVNG 367
Query: 423 NQELLALGASNVFAS 467
N+E++A+G N+ S
Sbjct: 368 NKEMMAIGFMNMAGS 382
>At1g77990.1 68414.m09088 sulfate transporter identical to sulfate
transporter [Arabidopsis thaliana] GI:1498120
Length = 658
Score = 31.1 bits (67), Expect = 0.53
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 258 LVGHIPTGLPVPQVPAIEL----IPQVAVDAFTITMVTYTISMSMALIFAAKEKYEIDAN 425
+V HI G V ++ + Q+A ++ T ++++ FA + Y +D N
Sbjct: 309 IVKHIKPGFNQLSVNQLQFKSPHLGQIAKIGLISAIIALTEAIAVGRSFATIKGYRLDGN 368
Query: 426 QELLALGASNVFAS 467
+E++A+G N+ S
Sbjct: 369 KEMMAMGFMNIAGS 382
>At4g11820.2 68417.m01882 hydroxymethylglutaryl-CoA synthase /
HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A
synthase identical to Hydroxymethylglutaryl-CoA synthase
(EC 4.1.3.5) (HMG-CoA synthase)
(3-hydroxy-3-methylglutaryl coenzyme A synthase)
(Swiss-Prot:P54873) [Arabidopsis thaliana]
Length = 461
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 366 ISMSMALIFAAKEKYEIDANQ-ELLALGASNVFASFFCLHTFLCQ 497
ISMS + + EKY+ID NQ L +G+ V + TFL Q
Sbjct: 54 ISMSFNAVTSLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQ 98
>At1g20230.1 68414.m02527 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 760
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 99 YHERSPVQVRKIFHHLXYCKDDFIVPGRLP 10
YH+ + V +KI HHL +C D V LP
Sbjct: 232 YHKEAVVMFQKI-HHLGFCPDQVTVSSVLP 260
>At4g22850.1 68417.m03300 expressed protein
Length = 296
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 518 PYVQRDRLAQKGMQAE-ERSEHVTGSKR**FLIGVDLVF 405
PYV+ + +KG ++E E+ E T S R F + + L+F
Sbjct: 25 PYVKLSEVLEKGQESEQEKEEEKTDSSRFWFWVKLSLLF 63
>At3g27040.1 68416.m03383 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 358
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 321 AGSARWRVLAAPEGRSVY 268
AG +WR+LA P+G ++Y
Sbjct: 119 AGRCKWRLLAFPKGNNIY 136
>At2g26750.1 68415.m03208 epoxide hydrolase, putative strong
similarity to ATsEH [Arabidopsis thaliana] GI:1109600
Length = 320
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 130 NNELLKPWVSKRSRVP 177
NNELL PWV + +VP
Sbjct: 240 NNELLGPWVGSKIQVP 255
>At2g26740.1 68415.m03207 epoxide hydrolase, soluble (sEH) identical
to ATsEH [Arabidopsis thaliana] GI:1109600
Length = 321
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 130 NNELLKPWVSKRSRVP 177
NNELL PWV + +VP
Sbjct: 241 NNELLGPWVGSKIQVP 256
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,134,506
Number of Sequences: 28952
Number of extensions: 215080
Number of successful extensions: 673
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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