Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0764
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    25   0.39 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    25   0.39 
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   1.6  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.5  

>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
 Frame = +1

Query: 4   ASSTEHR-AASIKHQAWPRQSPSYS---TTDARVPSSD*ELGSLSQER*PKQSKTRSI-S 168
           A ST H   AS      P  S SY      D R P +    G LSQ    +QS   S   
Sbjct: 58  ADSTSHTDGASTPDVRPPSSSLSYGGPVNDDVRSPGTP---GPLSQAPASQQSLDASDPD 114

Query: 169 ATGTWTAPTSTSMRRRWGTP*EPSLKKENQKRGYLHN 279
           A G W        RR W +P +     +  +RG L++
Sbjct: 115 AMGKWCP------RREWSSPPDARAASDAARRGVLYS 145


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
 Frame = +1

Query: 4   ASSTEHR-AASIKHQAWPRQSPSYS---TTDARVPSSD*ELGSLSQER*PKQSKTRSI-S 168
           A ST H   AS      P  S SY      D R P +    G LSQ    +QS   S   
Sbjct: 214 ADSTSHTDGASTPDVRPPSSSLSYGGPVNDDVRSPGTP---GPLSQAPASQQSLDASDPD 270

Query: 169 ATGTWTAPTSTSMRRRWGTP*EPSLKKENQKRGYLHN 279
           A G W        RR W +P +     +  +RG L++
Sbjct: 271 AMGKWCP------RREWSSPPDARAASDAARRGVLYS 301


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 86  HVSRHRTRNLEV*ARRGDPSSQRRDRY 166
           H+++ R R+ E  +++ DP  Q + RY
Sbjct: 91  HLTQKRARDWERLSKKYDPQGQYKKRY 117


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 9   EHRAPSSKHQASSMAAPVPVIFNNG 83
           EH   S ++  ++ A  VP IFN G
Sbjct: 431 EHETESGRNFGAAHADDVPYIFNMG 455


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 9   EHRAPSSKHQASSMAAPVPVIFNNG 83
           EH   S ++  ++ A  VP IFN G
Sbjct: 431 EHETESGRNFGAAHADDVPYIFNMG 455


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 9   EHRAPSSKHQASSMAAPVPVIFNNG 83
           EH   S ++  ++ A  VP IFN G
Sbjct: 431 EHETESGRNFGAAHADDVPYIFNMG 455


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 9   EHRAPSSKHQASSMAAPVPVIFNNG 83
           EH   S ++  ++ A  VP IFN G
Sbjct: 431 EHETESGRNFGAAHADDVPYIFNMG 455


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 564 GSGQDQAGCPPDRSGTP 614
           GSGQ+Q   P   S TP
Sbjct: 415 GSGQNQPESPESSSSTP 431


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 12/56 (21%), Positives = 21/56 (37%)
 Frame = +1

Query: 313 SRGGSYQDLVKESGFGVLGSLSDTLAPGLQGGRRPVPEDSEDKFIPSAVDYVDTWG 480
           S G   ++ V     G++ SL       + G  + +P D   +F    +     WG
Sbjct: 200 SEGNILEEFVLSRAGGLVNSLYQNATRKVCGVWKRIPHDYRKRFRMEKIYVALVWG 255


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 9   EHRAPSSKHQASSMAAPVPVIFNNG 83
           EH   S ++  ++    VP IFN G
Sbjct: 431 EHETESGRNFGAAHGDDVPYIFNMG 455


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 118 FQVPSPMTGHVRPLLNMT 65
           +Q+  P+T  ++ + NMT
Sbjct: 443 YQIADPVTNEIKGVYNMT 460


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 448 PSAVDYVDTWGALEALVEKGPPAP 519
           P+ +D+ +T GA+      G P P
Sbjct: 30  PNRIDFSNTTGAVVECSAHGNPTP 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,533
Number of Sequences: 336
Number of extensions: 3210
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)