Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0764
(629 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 4e-18
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 79 4e-15
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 44 1e-04
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 43 2e-04
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_17079| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5) 31 1.0
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 30 1.3
SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17) 29 3.1
SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 3.1
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 28 5.4
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_39716| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_30959| Best HMM Match : SRP54 (HMM E-Value=5.2e-25) 28 7.2
SB_13055| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_27063| Best HMM Match : GATA (HMM E-Value=2e-18) 27 9.5
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 88.6 bits (210), Expect = 4e-18
Identities = 40/56 (71%), Positives = 44/56 (78%)
Frame = +3
Query: 66 VIFNNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALR 233
V NNG PV+GLGTWKSKPG+V AVK AI GYRH+DCA+ Y NEKEVGDALR
Sbjct: 4 VKLNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALR 59
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +2
Query: 254 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPK 427
++R+D+FITSKLW T H P V SLK+LGL+YLDLYLIHWP +F++GD+ FPK
Sbjct: 66 VERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRDGDEFFPK 123
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 421 PEDSEDKFIPSAVDYVDTWGALEALVEKGPPAP*DSPTSTGRQIERVLEVAKIKPAVLQI 600
P+D + + + D DTW A+E LV++G +Q++ + +A+IKP Q+
Sbjct: 122 PKDEQGNVLYAYHDPCDTWKAMEKLVDEGLVKAIGLSNFNSKQVDDICAIARIKPVANQV 181
Query: 601 EVAPL 615
E PL
Sbjct: 182 ECHPL 186
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 78.6 bits (185), Expect = 4e-15
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +2
Query: 209 EGGGGRLESQV*RR-KIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIH 385
EG G S+V K+KRE++F+TSKLWC H PD V A + +LKNL L+YLDLYLIH
Sbjct: 91 EGEIGEALSEVLTEGKVKREELFVTSKLWCDSHHPDDVLPACQATLKNLQLDYLDLYLIH 150
Query: 386 WPQAFKEG 409
P AFK+G
Sbjct: 151 IPVAFKKG 158
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +3
Query: 111 TWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGKSK 260
TW+S EV AV+ AI++GYRH+DCA IY NE E+G+AL EGK K
Sbjct: 59 TWQSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVK 108
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +3
Query: 105 LGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGKSK 260
L TW S G+V AV+ A ++GYR +DCA I+ NE G+AL +GK K
Sbjct: 4 LCTWHSYKGKVGNAVRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVK 52
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +3
Query: 75 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALR 233
++G P GLG + QAV A++ GYR +D A Y NEK VG+ALR
Sbjct: 4 SDGYKIPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEALR 56
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +3
Query: 69 IFNNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALR 233
I N+GR P++GLG QAV A++ GYR +D A Y NE+ VG+A+R
Sbjct: 69 IMNDGRKIPLLGLGAHDIHS---KQAVLWALESGYRLIDTASRYHNEQSVGEAVR 120
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 254 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWP 391
I R +I++ +K++ T H +A SL LGL Y+DLYLIH+P
Sbjct: 124 IPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFP 169
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +2
Query: 233 SQV*RRKIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQ 394
S V + +KREDI++T+KL + + K S+K L + Y+DL+LIH P+
Sbjct: 75 SAVRKSGLKREDIYVTTKLKPSEEGHSNALKYAKESIKKLDIGYVDLFLIHTPR 128
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +3
Query: 156 AIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGKSKERISS*RPSYGARSTAL 311
A+ GYR +D A IY NEKEVG A+R + + + +PS S AL
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVRKSGLKREDIYVTTKLKPSEEGHSNAL 104
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 57 PVPVIFNNGRTCPVIGLGTWKSKPGEVT-QAVKDAIDIGYRHVDCAHIY-LNEKEVGDAL 230
P V+ +G T PV+G GT + GE T VK A++ GYR +D A Y L+E +V A+
Sbjct: 326 PADVLLASGYTMPVMGFGT--ATLGEDTLSVVKTALETGYRLIDTAQGYPLSEPQVAKAI 383
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +2
Query: 254 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIH 385
I R+DIFI +KL + + ++++ SL+ L +Y+DL+LIH
Sbjct: 388 IPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIH 431
>SB_17079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2537
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 55 RQSPSYSTTDARVPSSD*ELGSLSQER*PKQSKTRSISATGTWTAPTSTSMRRRWGTP 228
RQSP Y + D D +L + ER + K + G WT+ ST + G P
Sbjct: 2435 RQSPDYKSRDRTRQHLDDDLRMIELERQMLKRKEDELLQLGVWTSLVSTMLEALLGLP 2492
>SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5)
Length = 520
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 44 KHGRASPRHIQQRTHVSR-HRTRNLEV*ARRGDPSSQRRDRYRLPARGLRPHLPQ*EG 214
KH R + H V R H R+L + +R P R YR+ RGL P LP+ EG
Sbjct: 266 KHLRQTFVHPDVHADVQRIHPDRSLSLRLQRAGPLG--RHCYRVGGRGLGPDLPEEEG 321
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 338 SLKNLGLEYLDLYLIHW 388
SL+ LG++ +DLYL+HW
Sbjct: 51 SLERLGIDRIDLYLLHW 67
>SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17)
Length = 321
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 108 GTWKSKPGEVTQAVKDAIDIGYRHVDCA 191
G+W + P +VT ++ +D+G RHV CA
Sbjct: 209 GSWCASPSDVTPFLQ--VDLGTRHVICA 234
>SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 1151
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = +2
Query: 8 RAPSTEQQASSIKHGRASPRHIQQRTHVSRHRTRNLEV*ARRGDPSSQRRD 160
R S+ +Q+ S+ G+AS + +Q+TH S+ ++ ++ D ++ +D
Sbjct: 838 RVASSRKQSVSVSRGKASTKTKEQKTH-SQQSAQDFSTASKHKDKQNRNKD 887
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 8 RAPSTEQQASSIKHGRASPRHIQQRTHVSRHRTRNLEV*ARRGDPSSQRRDRYRLPAR 181
R+P + S K R+S H + R+H SR R+ + R P +RR + R P R
Sbjct: 255 RSPQRSRSPRSSKRYRSSRSHRKHRSH-SRSRSPRSK---RSRSPRKRRRSKSRSPRR 308
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 2 SHRAPSTEQQASSIKHGRASPRHIQQRTHVSRHR 103
SHR S+ Q+ +S H +AS H ++R HR
Sbjct: 1077 SHRVASSSQRVASGSHRKASGSHRERRGASGSHR 1110
>SB_39716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 102
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +3
Query: 9 EHRAPSSKHQASSMAAPVPVIFNNGRTCPVIGLGTWKSKPGEVTQAV 149
EH AP S A P NN CP G T KS+ E A+
Sbjct: 44 EHTAPRGLVVNQSQALHFPYSANNSCDCPPAGKETEKSQVSEKPSAM 90
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 9 EHRAPSSKHQASSMAAPVPVIF 74
+H PSS H A+S P+P+IF
Sbjct: 3023 QHSRPSSPHLATSTDIPLPLIF 3044
>SB_30959| Best HMM Match : SRP54 (HMM E-Value=5.2e-25)
Length = 440
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -3
Query: 429 IFGNRSSPSLKAWGQCIR*RSKYSKPRFFNEVLIAS----STRSGRWNVH 292
+ GN + LK + Q + S +PR + +L+ S TR G NVH
Sbjct: 329 LVGNEAVDQLKKFNQALADHSSQDRPRLIDGILLPSLTLLMTRFGPRNVH 378
>SB_13055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 287 LWCTFHRPDLV----EEAIKTSLKNLGLEYLDLYLIHWPQAFKEG 409
L+ TF RP + EEAIK S+ +L L L Y+ PQAF G
Sbjct: 1002 LFMTFTRPVVQSSDHEEAIKESVWSLMLRELLKYITSTPQAFLGG 1046
>SB_27063| Best HMM Match : GATA (HMM E-Value=2e-18)
Length = 563
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 7 SSTEHRAASIKHQAWPRQSPSYSTTDARVPSSD*ELGSLSQER*PKQSKTRSISATGTWT 186
+ T RA +P P Y +D +PS + + R +++T+S S +GT
Sbjct: 353 TGTPLRADVPPFAGYPPALPQYFASDLNMPSFGPGMPGIMANRNLTRTRTKSRSNSGTSC 412
Query: 187 APTSTSMRRRW 219
A T+ W
Sbjct: 413 ANCHTTQTTLW 423
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,131,398
Number of Sequences: 59808
Number of extensions: 421263
Number of successful extensions: 1323
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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