Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0764
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 93 1e-19
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 93 1e-19
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 72 3e-13
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 65 5e-11
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 53 1e-07
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical pr... 29 2.1
Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA hai... 29 2.1
AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone stem-... 29 2.1
Z46267-5|CAA86423.1| 216|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z78019-6|CAB01453.2| 370|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical pr... 28 6.3
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 28 6.3
AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassi... 28 6.3
AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical ... 28 6.3
Z68493-6|CAA92792.1| 335|Caenorhabditis elegans Hypothetical pr... 27 8.4
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 93.1 bits (221), Expect = 1e-19
Identities = 38/62 (61%), Positives = 49/62 (79%)
Frame = +3
Query: 75 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGK 254
N+G + P IGLGTW+SKPGEV A+K A+ GYRH+DCAH+Y N+KEVG+AL+ +EGK
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 255 SK 260
K
Sbjct: 68 VK 69
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = +2
Query: 251 KIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFP 424
K+KRE++FITSK+W TFH E I L +L L Y+DL LIHWPQ + EG +LFP
Sbjct: 67 KVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFP 124
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = +1
Query: 394 GLQGGRRPVPEDSEDKFIPSAVDYVDTWGALEALVEKGPPAP*DSPTSTGRQIERVLEVA 573
G G P K S VDY++TW A EA + G T QI+RV + A
Sbjct: 115 GYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAA 174
Query: 574 KIKPAVLQIEVAP 612
++KPA LQ+E+ P
Sbjct: 175 EVKPACLQVELHP 187
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 93.1 bits (221), Expect = 1e-19
Identities = 38/62 (61%), Positives = 49/62 (79%)
Frame = +3
Query: 75 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGK 254
N+G + P IGLGTW+SKPGEV A+K A+ GYRH+DCAH+Y N+KEVG+AL+ +EGK
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 255 SK 260
K
Sbjct: 68 VK 69
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = +2
Query: 251 KIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFP 424
K+KRE++FITSK+W TFH E I L +L L Y+DL LIHWPQ + EG +LFP
Sbjct: 67 KVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFP 124
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = +1
Query: 394 GLQGGRRPVPEDSEDKFIPSAVDYVDTWGALEALVEKGPPAP*DSPTSTGRQIERVLEVA 573
G G P K S VDY++TW A EA + G T QI+RV + A
Sbjct: 115 GYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAA 174
Query: 574 KIKPAVLQIEVAP 612
++KPA LQ+E+ P
Sbjct: 175 EVKPACLQVELHP 187
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +3
Query: 51 AAPVPVIFNNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDAL 230
+A + +NG PVIGLGTW+S P EV AVK A+ GYR +D A +Y NE+ +G A+
Sbjct: 3 SATASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAI 62
Query: 231 RAKFEEGKSK 260
+ EEG K
Sbjct: 63 KELLEEGVVK 72
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +2
Query: 254 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKE 406
+KRE++FIT+K W P +E ++ SLK L LEY+DLYL H P AF +
Sbjct: 71 VKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFND 121
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 194 HLPQ*EGGGGR-LESQV*RRKIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLD 370
HL Q E G+ L + K+KREDIF+TSKL T H P+ V + +++ LK L LEY+D
Sbjct: 49 HLYQNEHIIGKVLHEYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYID 108
Query: 371 LYLIHWPQAFKEGDDLF 421
LYLIH P FK + F
Sbjct: 109 LYLIHCPFPFKHQEGSF 125
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 75 NNGRTCPVIGLGTWKSKP-GEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEG 251
N G P+ GLGTW+ K E+T A++ A+D GYR +D AH+Y NE +G L G
Sbjct: 9 NTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISSG 68
Query: 252 KSK 260
K K
Sbjct: 69 KLK 71
Score = 35.5 bits (78), Expect = 0.032
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +1
Query: 400 QGGRRPVPEDSEDKFIPSAVDYVDTWGALEALVEKGPPAP*DSPTSTGRQIERVLEVAKI 579
+G P+ E+ E + + ++DTW ALE L ++G + Q++ + + A++
Sbjct: 122 EGSFAPLMENGE--LAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEV 179
Query: 580 KPAVLQIE 603
KPA Q+E
Sbjct: 180 KPANQQVE 187
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +3
Query: 48 MAAPVPVI-FNNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGD 224
M++ VP+ +NG P IGLGTW+ E +++A+ GYRH+D A +Y NE ++GD
Sbjct: 1 MSSKVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGD 60
Query: 225 ALRAKFEEG 251
AL F EG
Sbjct: 61 ALAELFAEG 69
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +2
Query: 254 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKE 406
+KREDIFIT+K +C PD+VEEA++ SLK L L+Y+DLYL H P + K+
Sbjct: 71 LKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTKD 121
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +3
Query: 75 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDAL 230
N G CP+IGLGT+K +V + A+ GYR D A +Y NEKE+GDAL
Sbjct: 6 NTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDAL 57
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +2
Query: 218 GGRLESQV*RRKIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQA 397
G LE + + +KREDIFIT+K+ + + V++ + SL L Y+D+YLIH+P++
Sbjct: 54 GDALEILLPKHNLKREDIFITTKMHP--NTVENVKKLVDESLSLLKTSYIDMYLIHYPKS 111
Query: 398 FKEGD 412
F GD
Sbjct: 112 FDYGD 116
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +3
Query: 75 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGK 254
+N + P +GLGTW+S +V AVK A+ GY +D A Y NE+ +G A++ EG
Sbjct: 51 SNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGV 110
Query: 255 SK 260
K
Sbjct: 111 VK 112
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 66 VIFNNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALR 233
V N+G PVIG GTW+ + V+DA++ GYRH+D A + N++EV ++
Sbjct: 7 VTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIK 62
Score = 51.6 bits (118), Expect = 4e-07
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +2
Query: 248 RKIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGD 412
RK++RE++F++SK+W T+H + + I L+ Y+DL +IHWP + E +
Sbjct: 68 RKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAEDE 122
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +1
Query: 403 GGRRPVPEDSEDKFIPSAVDYVDTWGALEALVEKGPPAP*DSPTSTGRQIERVLEVAKIK 582
G R P + K S VDY++TW ALE G Q+E+V IK
Sbjct: 125 GERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQVWTKGLIK 184
Query: 583 PAVLQIEVAP 612
PAVLQ+E+ P
Sbjct: 185 PAVLQVEMNP 194
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +2
Query: 218 GGRLESQV*RRKIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWP 391
G LE + +KREDI+ITSKL + E+I+ SL NL +EYLDL LIHWP
Sbjct: 55 GRILEKLLPANGLKREDIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWP 112
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 93 PVIGLGTWKSKPGEVTQAVKDA-IDIGYRHVDCAHIYLNEKEVGDAL 230
P+IG+GTW+ + E+ + V DA GYR +D A +Y NE ++G L
Sbjct: 12 PLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRIL 58
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +3
Query: 75 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALR 233
N+G P +G GT+K V A+ A+ GYR D A YLNEKE+G+AL+
Sbjct: 16 NSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALK 68
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 218 GGRLESQV*RRKIKREDIFITSKLWCTFHR-PDLVEEAIKTSLKNLGLEYLDLYLIHWPQ 394
G L+ + + + R D+F+TSK + + ++ SL++L +Y+D+YL+H+P+
Sbjct: 64 GEALKILLPKHGLSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPK 123
Query: 395 AFKEGDD 415
+D
Sbjct: 124 PNDSDND 130
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +3
Query: 78 NGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALR 233
NG+ P + LGT+++K ++ AV +A+ +GYR D A Y NEK++G AL+
Sbjct: 6 NGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALK 57
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 218 GGRLESQV*RRKIKREDIFITSKL--WCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWP 391
G L++ + R I EDI++TSK+ + + + +L+ + + SL+ L +YLDL L+H+P
Sbjct: 53 GLALKTLLPRHNICSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYP 112
Query: 392 QAFKEGD 412
+ D
Sbjct: 113 RPLDTED 119
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +2
Query: 290 WCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKIQ 433
W P +E A++ SLK L LEY+DLYL H P AF DD+ KI+
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAF--SDDMSQKIE 98
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +2
Query: 254 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQ 394
+ RE++F+++KLW D V A +TS + L +YLD+Y+IH PQ
Sbjct: 64 VPREEMFLSTKLW-PVDCGDEVYNAFQTSCEKLQTDYLDMYMIHMPQ 109
Score = 33.1 bits (72), Expect = 0.17
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 57 PVPVIFNNGRTCPVIGLGTWKSKPGEVTQAVKDAID-IGYRHVDCAHIYLNEKEVGDALR 233
P V+ NN P+IGLGT S G AV +I GYR +D A Y EK++G A++
Sbjct: 3 PTTVLSNNVEM-PLIGLGTTHSG-GYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVK 60
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 218 GGRLESQV*RRKIKREDIFITSKL-WCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQ 394
G L+ + + + RED+FIT+K+ + + E+ + SL L +Y+DL LIH+P+
Sbjct: 64 GNSLKKYLPQFGLTREDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPR 123
Query: 395 AFKEGDD 415
G+D
Sbjct: 124 DRDTGND 130
>Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical
protein R06F6.1 protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 423 GNRSSPSLKAWGQCIR*RSKYSKPRFFNEVLIASSTRS 310
G RSSP KAWG I+ +K+ F E S RS
Sbjct: 9 GTRSSPRKKAWGSPIKATAKFQSDIFSVEDFADLSNRS 46
>Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA
hairpin-binding protein protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 423 GNRSSPSLKAWGQCIR*RSKYSKPRFFNEVLIASSTRS 310
G RSSP KAWG I+ +K+ F E S RS
Sbjct: 9 GTRSSPRKKAWGSPIKATAKFQSDIFSVEDFADLSNRS 46
>AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone
stem-loop binding proteinCDL-1 protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 423 GNRSSPSLKAWGQCIR*RSKYSKPRFFNEVLIASSTRS 310
G RSSP KAWG I+ +K+ F E S RS
Sbjct: 9 GTRSSPRKKAWGSPIKATAKFQSDIFSVEDFADLSNRS 46
>Z46267-5|CAA86423.1| 216|Caenorhabditis elegans Hypothetical
protein F49E2.4 protein.
Length = 216
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = -1
Query: 203 EVDVGAVHVPVADIDRVF---DCLGHLSWLRL 117
+VD A +P+ADI+ V+ +CL L W +L
Sbjct: 154 KVDTDASLIPIADINNVYSGENCLARLGWNKL 185
>Z78019-6|CAB01453.2| 370|Caenorhabditis elegans Hypothetical
protein ZK863.1 protein.
Length = 370
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 602 SIWRTAGLILATSSTLSIWRPVEVGE-SYGAG 510
S W T +IL S T IW P+ + E S+ G
Sbjct: 132 STWNTLLIILLISCTCQIWAPITITELSFSPG 163
>Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 346 ESGFGVLGSLSDTLAPGLQGGRRPVPEDS 432
ESG G GSL +T+ L GG R VP S
Sbjct: 295 ESGSGT-GSLFETMTSVLSGGNRKVPTSS 322
>Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 346 ESGFGVLGSLSDTLAPGLQGGRRPVPEDS 432
ESG G GSL +T+ L GG R VP S
Sbjct: 295 ESGSGT-GSLFETMTSVLSGGNRKVPTSS 322
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical protein
F54D11.2 protein.
Length = 1145
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 24 SSKHQASSMAAPVPVIFNNGRTCPVIGLGT 113
SS H ASS AAP PV +GR V G G+
Sbjct: 996 SSTHSASSSAAPSPV-GASGRRATVTGAGS 1024
>AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassium
channel protein.
Length = 580
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 4 ASSTEHRAASIKHQAWPRQSPSYSTTDAR-VPSSD*ELGSLSQER 135
ASS + + K Q + +QS +T + PS+D E+G L QER
Sbjct: 328 ASSMDSNNLTRKRQLFKKQSSLVNTFRRKGSPSTDVEMGELQQER 372
>AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical
protein Y54G9A.3 protein.
Length = 621
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 4 ASSTEHRAASIKHQAWPRQSPSYSTTDAR-VPSSD*ELGSLSQER 135
ASS + + K Q + +QS +T + PS+D E+G L QER
Sbjct: 369 ASSMDSNNLTRKRQLFKKQSSLVNTFRRKGSPSTDVEMGELQQER 413
>Z68493-6|CAA92792.1| 335|Caenorhabditis elegans Hypothetical
protein C33A12.8 protein.
Length = 335
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 269 YPLF*FSFFKLGSQGVPHLLLIEVDVGAVHVPVAD 165
YPLF F+FF + + GV L +GAVH+ A+
Sbjct: 166 YPLF-FTFFLIPAVGVCRQLSSPYPLGAVHIYYAN 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,714,101
Number of Sequences: 27780
Number of extensions: 317218
Number of successful extensions: 894
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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