Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0763
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical p... 130 7e-31
Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical pr... 130 7e-31
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 60 2e-09
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 54 8e-08
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 44 6e-05
AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical ... 38 0.007
Z68320-4|CAA92705.4| 448|Caenorhabditis elegans Hypothetical pr... 32 0.27
AL008881-4|CAH10844.2| 448|Caenorhabditis elegans Hypothetical ... 32 0.27
AF077532-1|AAC26268.1| 301|Caenorhabditis elegans Hypothetical ... 31 0.47
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 31 0.82
U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical p... 30 1.4
Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF025471-10|AAB71059.1| 326|Caenorhabditis elegans Hypothetical... 29 2.5
AF016658-4|AAB66043.1| 242|Caenorhabditis elegans Hypothetical ... 29 2.5
Z81061-2|CAB02931.1| 312|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF040645-7|AAB94977.2| 304|Caenorhabditis elegans Hypothetical ... 28 4.4
AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical ... 28 4.4
L15201-1|AAA27946.2| 273|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical pr... 27 7.7
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 27 7.7
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 27 7.7
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 27 7.7
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 27 7.7
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 27 7.7
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical
protein T16H12.5b protein.
Length = 409
Score = 130 bits (314), Expect = 7e-31
Identities = 74/177 (41%), Positives = 103/177 (58%), Gaps = 7/177 (3%)
Frame = +1
Query: 1 TIFCEVSVVADSINISGQSNVVQ-FKVPECRLSDDLGALFDNERFSDVTLA----VGG-- 159
+IFCEVSVVA+++N++GQ+NV Q FKVP CRL+DD+ LFDN++FSD TL +G
Sbjct: 178 SIFCEVSVVAETVNVTGQTNVSQLFKVPPCRLADDMYGLFDNKQFSDFTLVCKSDLGSPT 237
Query: 160 REFQAHKAILAARXSCVRCDVRTRNGRXXXXXXXXXXXXXXXLREMLRFIYTGRAPNXXX 339
+ F HKAILAAR +RE+L ++YTG+
Sbjct: 238 QTFHIHKAILAARSRVFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQTKYIEQ 297
Query: 340 XXXXXXXXXXXXXXERLKVMCEEALCLSLSVETAADTLILADLHSADQLKAQTIDFI 510
+RLKVMCE+ALC L+ + A+ TL+LAD++SA QL+A +I+FI
Sbjct: 298 MAQSLIAAADKYQLDRLKVMCEQALCYQLTTDNASLTLMLADMYSASQLRAHSINFI 354
>Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical
protein T16H12.5a protein.
Length = 451
Score = 130 bits (314), Expect = 7e-31
Identities = 74/177 (41%), Positives = 103/177 (58%), Gaps = 7/177 (3%)
Frame = +1
Query: 1 TIFCEVSVVADSINISGQSNVVQ-FKVPECRLSDDLGALFDNERFSDVTLA----VGG-- 159
+IFCEVSVVA+++N++GQ+NV Q FKVP CRL+DD+ LFDN++FSD TL +G
Sbjct: 220 SIFCEVSVVAETVNVTGQTNVSQLFKVPPCRLADDMYGLFDNKQFSDFTLVCKSDLGSPT 279
Query: 160 REFQAHKAILAARXSCVRCDVRTRNGRXXXXXXXXXXXXXXXLREMLRFIYTGRAPNXXX 339
+ F HKAILAAR +RE+L ++YTG+
Sbjct: 280 QTFHIHKAILAARSRVFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQTKYIEQ 339
Query: 340 XXXXXXXXXXXXXXERLKVMCEEALCLSLSVETAADTLILADLHSADQLKAQTIDFI 510
+RLKVMCE+ALC L+ + A+ TL+LAD++SA QL+A +I+FI
Sbjct: 340 MAQSLIAAADKYQLDRLKVMCEQALCYQLTTDNASLTLMLADMYSASQLRAHSINFI 396
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Frame = +1
Query: 13 EVSVVADSINISGQSNVVQFKVPECRLSDDLGALFDNERFSDVTLAVGGREFQAHKAILA 192
E+ V ++I + + + E +L +D LF E D + V G+ +AHKA+LA
Sbjct: 161 EIDVAVETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLA 220
Query: 193 ARXSCVRCDVRTRN-GRXXXXXXXXXXXXXXXLREMLRFIYTGRA-PNXXXXXXXXXXXX 366
AR + ++ + EM+ +IY GR +
Sbjct: 221 ARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMATALLIAA 280
Query: 367 XXXXXERLKVMCEEALCLSLSVETAADTLILADLHSADQLKAQTIDFI 510
E LK CE+ L ++++E A LI+ DL+SA +L+ + + +I
Sbjct: 281 DKYRLEELKSHCEKYLVENINIENACSLLIIGDLYSAPKLRKRAVTYI 328
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Frame = +1
Query: 13 EVSVVADSINISGQSNVVQFKVPECRLSDDLGALFDNERFSDVTLAVGGREFQAHKAILA 192
E+ V ++I + + + E +L +D LF E D + V G+ +AHKA+LA
Sbjct: 161 EIDVAVETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLA 220
Query: 193 ARXSCVRCDVRTRN-GRXXXXXXXXXXXXXXXLREMLRFIYTGRA-PNXXXXXXXXXXXX 366
AR + ++ + EM+ +IY GR +
Sbjct: 221 ARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMATALLIAA 280
Query: 367 XXXXXERLKVMCEEALCLSLSVETAADTLILADLHSADQLKAQTIDFI 510
E LK CE+ L ++++E A LI+ DL+SA +L+ + + +I
Sbjct: 281 DKYRLEELKSHCEKYLVENINIENACSLLIIGDLYSAPKLRKRAVTYI 328
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 54.0 bits (124), Expect = 8e-08
Identities = 42/167 (25%), Positives = 64/167 (38%)
Frame = +1
Query: 91 LSDDLGALFDNERFSDVTLAVGGREFQAHKAILAARXSCVRCDVRTRNGRXXXXXXXXXX 270
++ DL L+ + + +D TL V RE +AHKAILAAR +
Sbjct: 189 VTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRD 248
Query: 271 XXXXXLREMLRFIYTGRAPNXXXXXXXXXXXXXXXXXERLKVMCEEALCLSLSVETAADT 450
++ +L +IYTG N LK + E A+ L+ ET
Sbjct: 249 IDYEVVQAILYYIYTGTCTNMGGNALDILAAAERFALPGLKNIAEVAMRNGLATETVCKN 308
Query: 451 LILADLHSADQLKAQTIDFIXXXXXXXXXXXXXXXX*SRRNPHLIAE 591
L A+++ K + I +I SR+NP LI +
Sbjct: 309 LAFAEMYGLVDFKKEAIKYICMNANAVINSEGFLRL-SRQNPDLIVD 354
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 54.0 bits (124), Expect = 8e-08
Identities = 42/167 (25%), Positives = 64/167 (38%)
Frame = +1
Query: 91 LSDDLGALFDNERFSDVTLAVGGREFQAHKAILAARXSCVRCDVRTRNGRXXXXXXXXXX 270
++ DL L+ + + +D TL V RE +AHKAILAAR +
Sbjct: 196 VTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRD 255
Query: 271 XXXXXLREMLRFIYTGRAPNXXXXXXXXXXXXXXXXXERLKVMCEEALCLSLSVETAADT 450
++ +L +IYTG N LK + E A+ L+ ET
Sbjct: 256 IDYEVVQAILYYIYTGTCTNMGGNALDILAAAERFALPGLKNIAEVAMRNGLATETVCKN 315
Query: 451 LILADLHSADQLKAQTIDFIXXXXXXXXXXXXXXXX*SRRNPHLIAE 591
L A+++ K + I +I SR+NP LI +
Sbjct: 316 LAFAEMYGLVDFKKEAIKYICMNANAVINSEGFLRL-SRQNPDLIVD 361
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 44.4 bits (100), Expect = 6e-05
Identities = 31/151 (20%), Positives = 63/151 (41%), Gaps = 3/151 (1%)
Frame = +1
Query: 67 QFKVPECRLSDDLGALFDNERFSDVTLAVGGREFQAHKAILAARXSCVRCDVRTRNG-RX 243
Q ++PE + + +++++E F+D + VG + +AH+ IL + + N
Sbjct: 197 QEEMPEVIVRANNRSMWEDELFTDCVIHVGNKHIKAHRCILGQNSPVFKSMFSSPNMIEA 256
Query: 244 XXXXXXXXXXXXXXLREMLRFIYTGRAPNXXXXXXXXXXXXXXXXXE--RLKVMCEEALC 417
+R M+ F+YTG + E LK CE +
Sbjct: 257 QKGEIHIEDAKYDSVRAMVEFMYTGATESLESQGNIDEILAIADKYEVLMLKDQCERLIA 316
Query: 418 LSLSVETAADTLILADLHSADQLKAQTIDFI 510
+++++ + +D ++AD LK+ I F+
Sbjct: 317 QTINLKNVTQIAMFSDTYTADYLKSAVIRFL 347
>AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical
protein C05C8.6 protein.
Length = 581
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 91 LSDDLGALFDNERFSDVTLAVG-GREFQAHKAILAARXSCVRCDVRTRNGRXXXXXXXXX 267
LS +F + SDVTL + G EF AH+ ILA R S R + T
Sbjct: 50 LSQSFDEIFTSTDHSDVTLVLDDGTEFAAHRLILAVRSSFFRAMLYTGFQESHQQLVTLQ 109
Query: 268 XXXXXXLREMLRFIYTGR 321
R +LR++YT +
Sbjct: 110 ETNSVAFRAVLRYMYTSK 127
>Z68320-4|CAA92705.4| 448|Caenorhabditis elegans Hypothetical
protein W07A12.4 protein.
Length = 448
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 100 DLGALFDNERFSDVTLAVGGREFQAHKAILA 192
D+ ++N +FSDV + VG + AH+ IL+
Sbjct: 34 DMAKFYNNAQFSDVNMKVGEESYPAHRLILS 64
>AL008881-4|CAH10844.2| 448|Caenorhabditis elegans Hypothetical
protein W07A12.4 protein.
Length = 448
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 100 DLGALFDNERFSDVTLAVGGREFQAHKAILA 192
D+ ++N +FSDV + VG + AH+ IL+
Sbjct: 34 DMAKFYNNAQFSDVNMKVGEESYPAHRLILS 64
>AF077532-1|AAC26268.1| 301|Caenorhabditis elegans Hypothetical
protein F40B1.1 protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +1
Query: 121 NERFSDVTLAVGGREFQAHKAILAARXS 204
NE FSDV LAVG +EF K LA S
Sbjct: 148 NEEFSDVVLAVGDKEFFVLKQFLAYHSS 175
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 30.7 bits (66), Expect = 0.82
Identities = 26/135 (19%), Positives = 42/135 (31%)
Frame = +1
Query: 103 LGALFDNERFSDVTLAVGGREFQAHKAILAARXSCVRCDVRTRNGRXXXXXXXXXXXXXX 282
LG L + + DVTL G + AH+ +L+A ++
Sbjct: 46 LGGLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPP 105
Query: 283 XLREMLRFIYTGRAPNXXXXXXXXXXXXXXXXXERLKVMCEEALCLSLSVETAADTLILA 462
L ++ F YTG ++ C + L L A
Sbjct: 106 TLEALIEFCYTGAIAIDDSNVQDILPAACLLQIHEVQTACCDYLKKQLDPSNCLGIRAFA 165
Query: 463 DLHSADQLKAQTIDF 507
D HS +L + +F
Sbjct: 166 DTHSCKELLSSADEF 180
>U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical
protein F37A4.9 protein.
Length = 418
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 58 NVVQFKVPECRLSDDLGALFDNERFSD-VTLAVGGREFQAHKAILAAR 198
N K+ E D FSD + +A GREF H ILAAR
Sbjct: 207 NTKCLKIDESSAHDAFTEFLSTGEFSDFIIVASCGREFPTHMCILAAR 254
>Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical
protein F22G12.6 protein.
Length = 276
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +1
Query: 88 RLSDDLGALFDNERFSDVTLAVGGREFQ---AHKAILAAR 198
RL +L + RFSDVT G + AHK +LAAR
Sbjct: 48 RLLSLTSSLLEKPRFSDVTFKFAGNSLKSVPAHKYVLAAR 87
>AF025471-10|AAB71059.1| 326|Caenorhabditis elegans Hypothetical
protein R52.1 protein.
Length = 326
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 124 ERFSDVTLAVGGREFQAHKAILAA 195
E FSDV L VGG++F K LA+
Sbjct: 146 EEFSDVVLEVGGKKFYVLKKFLAS 169
>AF016658-4|AAB66043.1| 242|Caenorhabditis elegans Hypothetical
protein B0047.3 protein.
Length = 242
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 121 NERFSDVTLAVGGREFQAHKAILAA 195
NE FSDV +AVG +F K LA+
Sbjct: 71 NEEFSDVVVAVGNEKFYVLKVYLAS 95
>Z81061-2|CAB02931.1| 312|Caenorhabditis elegans Hypothetical
protein F14H8.2 protein.
Length = 312
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 203 PVFAAMFEHEMEERKRNKST*RTSIMK 283
PVF + EH +EERKR + +T+ +K
Sbjct: 254 PVFLVVAEHHLEERKRPTKSSKTAPVK 280
>AF040645-7|AAB94977.2| 304|Caenorhabditis elegans Hypothetical
protein F52C6.11 protein.
Length = 304
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 121 NERFSDVTLAVGGREFQAHKAILAA 195
NE FSDV LAVG ++F + LA+
Sbjct: 144 NEEFSDVILAVGDKKFFVLRKFLAS 168
>AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical
protein M151.7 protein.
Length = 416
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3
Query: 433 PPRDSSTAPLRTSLLAAPMHTYRPQ 359
P SSTAPL +SLL AP Y P+
Sbjct: 36 PNHASSTAPLLSSLLNAPGSLYGPE 60
>L15201-1|AAA27946.2| 273|Caenorhabditis elegans Hypothetical
protein C08C3.2 protein.
Length = 273
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 94 SDDLGALFDN--ERFSDVTLAVGGREFQAHKAILAARXS 204
S D+ FD +RFSDV L VG +F K LA+ S
Sbjct: 132 SKDVLRSFDESEKRFSDVILVVGDEKFYVLKLFLASHSS 170
>Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical
protein M28.2 protein.
Length = 681
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 218 SQRTQDXRAANIALCA*NSLPPTASVTSENLSLS 117
+ + ++AN+A+C N+L T SE+LS+S
Sbjct: 493 NDNAEQAKSANLAICDNNNLDQTFIAYSESLSMS 526
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical
protein K10C2.1 protein.
Length = 2314
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 430 PRDSSTAPLRTSLLAAPMHTYRPQLADR 347
P D + PLR+ LA P T+ + ADR
Sbjct: 549 PYDLTATPLRSQFLAPPQKTWTRKQADR 576
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/140 (17%), Positives = 47/140 (33%)
Frame = +1
Query: 88 RLSDDLGALFDNERFSDVTLAVGGREFQAHKAILAARXSCVRCDVRTRNGRXXXXXXXXX 267
++ + + L E DV L V G +AH+ ILAA +
Sbjct: 96 KIMEQMRILRQTEELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQ 155
Query: 268 XXXXXXLREMLRFIYTGRAPNXXXXXXXXXXXXXXXXXERLKVMCEEALCLSLSVETAAD 447
+R ++ +IYT + + + V C++ L ++
Sbjct: 156 DIPEESVRIIVDYIYTDKIAITMNNVHQLIFTATVLQMDVIVVACQQFLATMITSHNCMS 215
Query: 448 TLILADLHSADQLKAQTIDF 507
+D+++ L + DF
Sbjct: 216 LYHFSDIYNCTNLISSIEDF 235
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 127 RFSDVTLAVGGREFQAHKAILAA 195
RF DV + V + F AH+ ILAA
Sbjct: 40 RFCDVEIVVQNKSFAAHRNILAA 62
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 127 RFSDVTLAVGGREFQAHKAILAA 195
RF DV + V + F AH+ ILAA
Sbjct: 40 RFCDVEIVVQNKSFAAHRNILAA 62
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 127 RFSDVTLAVGGREFQAHKAILAA 195
RF DV + V + F AH+ ILAA
Sbjct: 40 RFCDVEIVVQNKSFAAHRNILAA 62
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/140 (17%), Positives = 47/140 (33%)
Frame = +1
Query: 88 RLSDDLGALFDNERFSDVTLAVGGREFQAHKAILAARXSCVRCDVRTRNGRXXXXXXXXX 267
++ + + L E DV L V G +AH+ ILAA +
Sbjct: 96 KIMEQMRILRQTEELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQ 155
Query: 268 XXXXXXLREMLRFIYTGRAPNXXXXXXXXXXXXXXXXXERLKVMCEEALCLSLSVETAAD 447
+R ++ +IYT + + + V C++ L ++
Sbjct: 156 DIPEESVRIIVDYIYTDKIAITMNNVHQLIFTATVLQMDVIVVACQQFLATMITSHNCMS 215
Query: 448 TLILADLHSADQLKAQTIDF 507
+D+++ L + DF
Sbjct: 216 LYHFSDIYNCTNLISSIEDF 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,673,513
Number of Sequences: 27780
Number of extensions: 204793
Number of successful extensions: 583
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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