Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0761
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    44   1e-06
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.9  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   6.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   6.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   6.4  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   8.5  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   8.5  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 26/79 (32%), Positives = 43/79 (54%)
 Frame = +1

Query: 250 KHRLVTFEPETFEPLSSLKILSLRNNSILDIPSANLGFVIHLEYLDLSENLIQQVSRHGL 429
           KHR   F  +  + L +LK+    ++S+ + PS  +  +  LE LDLS N ++ V  +  
Sbjct: 4   KHRKQRFV-DIGDSLLTLKLTHALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSF 62

Query: 430 PFLKELKHLDLNNNIIESV 486
            FL+ LK + L +N IE +
Sbjct: 63  HFLRSLKKVHLQDNTIEMI 81



 Score = 38.3 bits (85), Expect = 7e-05
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
 Frame = +1

Query: 253 HRLVTFEPETFEPLS-SLKILSLRNNSILDIPSANLGFVIHLEYLDLSENLIQQVSRHGL 429
           + + +   + F P+  SL  L L +N +L+      G + HL+ LDLS N + ++     
Sbjct: 233 NNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTF 292

Query: 430 PFLKELKHLDLNNNIIESVDSIRFS*LPSLR 522
              K+L+ LD ++N I  + +  F  L +LR
Sbjct: 293 RNTKKLQWLDTSHNRISEIPNDLFRFLGNLR 323



 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 25/80 (31%), Positives = 37/80 (46%)
 Frame = +2

Query: 14  LTVLDISYNKILDLGSENFESNSEMRHLNLSNNFLKRLDKDAFVGXXXXXXXXXXXXEIS 193
           L  L + +NK+L+   + F +   ++ L+LS+N L  LD D F               IS
Sbjct: 250 LMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRIS 309

Query: 194 NIHVQTFRDLSALERLDFSN 253
            I    FR L  L  +DFS+
Sbjct: 310 EIPNDLFRFLGNLRIVDFSH 329



 Score = 36.3 bits (80), Expect = 3e-04
 Identities = 19/78 (24%), Positives = 40/78 (51%)
 Frame = +1

Query: 253 HRLVTFEPETFEPLSSLKILSLRNNSILDIPSANLGFVIHLEYLDLSENLIQQVSRHGLP 432
           ++L+    + F  +  L++L L +NS+ ++          L++LD S N I ++      
Sbjct: 258 NKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFR 317

Query: 433 FLKELKHLDLNNNIIESV 486
           FL  L+ +D ++N + S+
Sbjct: 318 FLGNLRIVDFSHNRLRSL 335



 Score = 32.7 bits (71), Expect = 0.003
 Identities = 25/74 (33%), Positives = 36/74 (48%)
 Frame = +1

Query: 193 EHTRADI*RFICFRKT*LLKHRLVTFEPETFEPLSSLKILSLRNNSILDIPSANLGFVIH 372
           +HT AD+   I   +  L  +R+ + E   F  L SLK L+L+ N I  I       +  
Sbjct: 109 QHTFADL---IQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPE 165

Query: 373 LEYLDLSENLIQQV 414
           LE LDL+ N I  +
Sbjct: 166 LEDLDLAYNSISSL 179



 Score = 29.1 bits (62), Expect = 0.042
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = +1

Query: 247 LKHR-LVTFEPETFEPLSSLKILSLRNNSILDIPSANLGFVIHLEYLDLSENLIQQVSRH 423
           L H  L   + +TF     L+ L   +N I +IP+    F+ +L  +D S N ++ +   
Sbjct: 279 LSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLP-D 337

Query: 424 GLPFLKELKHLDLNNNII 477
            L     L+ LD+++N++
Sbjct: 338 NLFRETGLERLDVSHNLL 355



 Score = 29.1 bits (62), Expect = 0.042
 Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +1

Query: 217 RFICFRKT*LLKHRLVTFEPETFEPLSSLKILSLRNNSILDIPSANLGFVIHLEYLDLSE 396
           RF C     L  +RL   +  TF+ +  L  L+L +NS L +    L F   LEY  L  
Sbjct: 392 RFKCLSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHNSQLTLEINGLSFQ-GLEYTLLHL 450

Query: 397 NLIQQVSRHGLPFLK--ELKHLDLNNNIIESVDSIRFS*LPSLRHL 528
           NL   VS   +P L    L  L L  N + +V       + SLR+L
Sbjct: 451 NL-DNVSLSQVPALSTPNLLSLSLAFNSLPTVALEVAGNISSLRYL 495



 Score = 26.2 bits (55), Expect = 0.30
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 14  LTVLDISYNKILDLGSENFESNSEMRHLNLSNN 112
           L+ LD+SYN++  + +  F+    +  LNL +N
Sbjct: 396 LSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHN 428



 Score = 25.4 bits (53), Expect = 0.52
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 403 IQQVSRHGLPFLKELKHLDLNNNIIESVDSIRFS*LPSLR 522
           +Q      +  L  L+ LDL+NN + +V    F  L SL+
Sbjct: 30  VQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLK 69



 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +2

Query: 8   TQLTVLDISYNKILDLGSENFESNSEMRHLNLSNNFLKRLDKDAFVG 148
           + L  L++ YN +  +      S +E+RHL+L  N +  L   + +G
Sbjct: 490 SSLRYLNLDYNDLSAVPIVT-HSLTELRHLSLEGNPITTLSNTSLLG 535



 Score = 23.0 bits (47), Expect = 2.8
 Identities = 15/74 (20%), Positives = 28/74 (37%)
 Frame = +2

Query: 11  QLTVLDISYNKILDLGSENFESNSEMRHLNLSNNFLKRLDKDAFVGXXXXXXXXXXXXEI 190
           QL  + +  N+I  L    F +   ++ LNL  N +  +  + F               I
Sbjct: 117 QLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSI 176

Query: 191 SNIHVQTFRDLSAL 232
           S++    F  + +L
Sbjct: 177 SSLDFNIFDQVGSL 190


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -1

Query: 110 YYLNSNVSFHCCFRSFHYLNLISCC 36
           YYL +N++++   R +++LN+  CC
Sbjct: 40  YYLLTNLTYNNTNRKYYWLNV--CC 62


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -1

Query: 194 SIFHCLIDSNQPNYSIRRRRLYQDALRNYYLN 99
           S+ H L++ ++   S+   +   D +R+YY+N
Sbjct: 472 SVEHLLMELSRAIDSVACSKTVSDGIRHYYVN 503


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = +2

Query: 518 YVIWDLSDNNMT--LIPTSAL 574
           +V+W L +NN T  LIP S +
Sbjct: 231 FVVWPLVENNPTLYLIPVSVI 251



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 250 KHRLVTFEPETFEPLSS 300
           +HR  T  PE  EPL S
Sbjct: 4   RHRFATGSPEETEPLYS 20


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = +2

Query: 518 YVIWDLSDNNMT--LIPTSAL 574
           +V+W L +NN T  LIP S +
Sbjct: 231 FVVWPLVENNPTLYLIPVSVI 251



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 250 KHRLVTFEPETFEPLSS 300
           +HR  T  PE  EPL S
Sbjct: 4   RHRFATGSPEETEPLYS 20


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 585 DSFERADVGIKVIL 544
           D FER+++G+K+ L
Sbjct: 351 DKFERSNIGVKIAL 364


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 585 DSFERADVGIKVIL 544
           D FER+++G+K+ L
Sbjct: 351 DKFERSNIGVKIAL 364


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 77  CFRSFHYLNLISCC 36
           C   F+Y++L+ CC
Sbjct: 257 CIYYFYYMHLLFCC 270


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 119 LRNYYLNSNVSFHCCFRSFHYLNLISC 39
           L  YYL +++     F  +H L +++C
Sbjct: 194 LAQYYLQADMLLWHTFGYYHILAMLNC 220


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 119 LRNYYLNSNVSFHCCFRSFHYLNLISC 39
           L  YYL +++     F  +H L +++C
Sbjct: 194 LAQYYLQADMLLWHTFGYYHILAMLNC 220


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 776 PHLDQSIHPY 747
           PHL+ ++HPY
Sbjct: 43  PHLNHAMHPY 52


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 698 ERIDSRAFVDNINLPKNMDEW 760
           ER    +F D  NLPK+  +W
Sbjct: 19  ERWQRLSFDDEDNLPKDPRQW 39


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 698 ERIDSRAFVDNINLPKNMDEW 760
           ER    +F D  NLPK+  +W
Sbjct: 19  ERWQRLSFDDEDNLPKDPRQW 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,479
Number of Sequences: 336
Number of extensions: 3505
Number of successful extensions: 33
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)