Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0759
         (557 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1049 + 25681284-25681349,25684409-25684627,25684720-256849...    27   7.7  
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388...    27   7.7  
08_02_1360 + 26391141-26391287,26392256-26392627,26393372-26393860     27   7.7  

>12_02_1049 +
           25681284-25681349,25684409-25684627,25684720-25684980,
           25685060-25685362
          Length = 282

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 425 SISQNLLRYQSMVPFCTAKGRKQLLSR 345
           ++  +L + Q   P CT+KG K  LSR
Sbjct: 229 AVKNDLAKLQLTAPVCTSKGEKVALSR 255


>12_01_0491 -
           3884764-3885114,3885143-3885403,3885493-3885711,
           3885792-3886019,3886378-3886480,3886703-3886815,
           3887262-3887323,3887915-3888104
          Length = 508

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 425 SISQNLLRYQSMVPFCTAKGRKQLLSR 345
           ++  +L + Q   P CT+KG K  LSR
Sbjct: 455 AVKNDLAKLQLTAPVCTSKGEKVALSR 481


>08_02_1360 + 26391141-26391287,26392256-26392627,26393372-26393860
          Length = 335

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 544 WGRKNFARTLAKVKFNILITD 482
           WGR  F +T+ ++ FN L TD
Sbjct: 154 WGRNLFQQTILQLGFNFLFTD 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,933,617
Number of Sequences: 37544
Number of extensions: 139447
Number of successful extensions: 198
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)