BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0758 (673 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_03_0172 + 15965342-15965711,15967757-15967849,15967976-159680... 30 1.9 04_04_0924 - 29449285-29449290,29449386-29449575,29449669-294497... 29 3.4 03_05_0225 + 22111269-22111327,22111587-22111638,22112148-221121... 29 3.4 01_06_0572 - 30337572-30338107,30338209-30338422,30338505-303388... 29 4.5 03_05_0531 - 25317446-25317762,25318000-25318160,25318239-253183... 28 5.9 >02_03_0172 + 15965342-15965711,15967757-15967849,15967976-15968060, 15968749-15968824,15968992-15969120,15969473-15969571, 15969661-15969762,15970257-15970415,15970507-15970602, 15971497-15971647,15971782-15971893,15972004-15972074, 15972548-15972984,15973421-15973492,15973713-15973810, 15974350-15974425,15975512-15975634,15975776-15975844 Length = 805 Score = 29.9 bits (64), Expect = 1.9 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +3 Query: 384 SIDALKHLNKTVTVKPLKSTEPSPKVHSGDFILPEEPPNVV 506 S++ HL KTVT PLK + ++GD + P V+ Sbjct: 664 SVEMTSHLRKTVTFLPLKVNKERNVTNNGDGQTVDNPETVI 704 >04_04_0924 - 29449285-29449290,29449386-29449575,29449669-29449772, 29449845-29449976,29450064-29450162,29450439-29450451, 29450688-29450719,29450802-29450921,29450992-29451105, 29451192-29451325,29454014-29454251 Length = 393 Score = 29.1 bits (62), Expect = 3.4 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Frame = +3 Query: 255 KMKKTNIKVERNEDNIEVFNIDDSDSDXXXXXXXXXXXXMDQ--KSIDALKHLNKTVTVK 428 K K NI E N DN + D+ D D DQ + D L HL K +K Sbjct: 85 KRSKVNISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNHDQHFEENDPLLHLTKEEHMK 144 Query: 429 PLK 437 LK Sbjct: 145 KLK 147 >03_05_0225 + 22111269-22111327,22111587-22111638,22112148-22112151, 22112981-22113114,22113201-22113314,22113386-22113505, 22113587-22113618,22113854-22113866,22114144-22114242, 22114388-22114464,22114733-22114922,22115020-22115025 Length = 299 Score = 29.1 bits (62), Expect = 3.4 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Frame = +3 Query: 255 KMKKTNIKVERNEDNIEVFNIDDSDSDXXXXXXXXXXXXMDQ--KSIDALKHLNKTVTVK 428 K K +I E N DN + D+ DSD DQ + D L HL K +K Sbjct: 44 KRSKVDISSESNSDNDCSLSSDNHDSDVHLSNHDESSDNHDQHFEENDPLLHLTKEELMK 103 Query: 429 PLK 437 LK Sbjct: 104 KLK 106 >01_06_0572 - 30337572-30338107,30338209-30338422,30338505-30338862, 30338948-30339048,30339185-30339749,30340553-30340664, 30341196-30341372,30341589-30341686,30341859-30341953, 30342078-30342158 Length = 778 Score = 28.7 bits (61), Expect = 4.5 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +3 Query: 405 LNKTVTVKPLKSTEPSPKVHSGDFILPEEPPNV 503 + +TVT L +P P V++ D ++P P NV Sbjct: 376 MGQTVTPYQLPGNKPYPLVYAADAVVPGTPANV 408 >03_05_0531 - 25317446-25317762,25318000-25318160,25318239-25318336, 25318462-25318623,25319707-25319799,25319909-25319971, 25320549-25320694,25320804-25320961,25321033-25321225, 25321865-25322093 Length = 539 Score = 28.3 bits (60), Expect = 5.9 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -3 Query: 209 GIVPFITWFIGFAVMCLRCFSRLVPSLALFAI 114 GI F+ W + +C S L P LALFA+ Sbjct: 329 GIAQFVKWAMRVVAICFVMQSTLDPLLALFAL 360 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,470,042 Number of Sequences: 37544 Number of extensions: 232086 Number of successful extensions: 528 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 523 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 528 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1703141568 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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