Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0754
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.49 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.49 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   3.5  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   3.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.6  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   6.1  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   6.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 70  TDFYDTTPNTDIPPYPNVDP 129
           +DFY  +P   IPP+P + P
Sbjct: 219 SDFYRFSPTGLIPPHPGLSP 238


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 70  TDFYDTTPNTDIPPYPNVDP 129
           +DFY  +P   IPP+P + P
Sbjct: 111 SDFYRFSPTGLIPPHPGLSP 130


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 269 N*KEHFGCKYQRARNC 316
           N +E F C+Y + +NC
Sbjct: 226 NYQEGFSCQYYQGKNC 241


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 269 N*KEHFGCKYQRARNC 316
           N +E F C+Y + +NC
Sbjct: 246 NYQEGFSCQYYQGKNC 261


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 314 CASPEPENGDNAEHL 358
           CASP  +  DN +HL
Sbjct: 133 CASPNRKPDDNQDHL 147


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 272 NCPHKLSTRLYCLRGYVSNSQILCTVNG 189
           N P+K ST  Y     +S S+ LC++ G
Sbjct: 63  NTPNKSSTSPYPPNHPLSGSKHLCSICG 90


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = +1

Query: 61  NVITDFYDTTPNTDIPPYP-NVDP 129
           N I   YD   N DI P P  +DP
Sbjct: 86  NAIIHIYDVHRNADIYPDPEKLDP 109


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 88  TPNTDIPPYPN 120
           +P + +PPYPN
Sbjct: 480 SPMSSLPPYPN 490


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,315
Number of Sequences: 336
Number of extensions: 4346
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)