Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0754
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34536| Best HMM Match : DUF680 (HMM E-Value=2.1) 66 2e-11
SB_44021| Best HMM Match : DUF622 (HMM E-Value=0.34) 31 1.3
SB_45869| Best HMM Match : ANF_receptor (HMM E-Value=0) 29 3.1
SB_24652| Best HMM Match : Kinesin (HMM E-Value=3) 29 4.1
SB_54045| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 29 4.1
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 4.1
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 29 5.4
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_32130| Best HMM Match : TSP_1 (HMM E-Value=0) 28 7.1
SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011) 28 7.1
SB_14335| Best HMM Match : DUF1315 (HMM E-Value=2.7) 28 7.1
SB_49093| Best HMM Match : rve (HMM E-Value=1.5e-17) 28 9.4
SB_44622| Best HMM Match : dsrm (HMM E-Value=3.1e-16) 28 9.4
SB_8971| Best HMM Match : efhand (HMM E-Value=2.3e-11) 28 9.4
>SB_34536| Best HMM Match : DUF680 (HMM E-Value=2.1)
Length = 331
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/81 (33%), Positives = 50/81 (61%)
Frame = +1
Query: 13 VYQWPLVKSLFKEKLLNVITDFYDTTPNTDIPPYPNVDPFNYDTMKNSLIERLESFTSAP 192
+Y W +K +F K+ V+ DF++++P+ + +++ M+ L++ L+SFTS P
Sbjct: 26 LYPWNNLKPVFMYKMDRVMRDFFESSPSRNSTSSEPTHVADFEVMRQRLLDCLDSFTSPP 85
Query: 193 FTVQRICELLTYPRKQYNRVE 255
FT+QR+CEL+ P++ Y E
Sbjct: 86 FTIQRLCELMVEPKRHYKNSE 106
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 255 KFMRAIEKNILVVST 299
KFMR IEKN+LVVS+
Sbjct: 107 KFMRGIEKNVLVVSS 121
>SB_44021| Best HMM Match : DUF622 (HMM E-Value=0.34)
Length = 572
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 529 MEVQDNNAKQLESATPSDFKTGTNKTAE-IKLEEAPSEVKTKIDSEPKMEIVTVPAAVDK 705
+E + K+L+ + F K + I L+ E+KTK++ +PK + +V ++
Sbjct: 111 LETAEKEKKELQEKLSNSFTAYKEKYQQYIDLQNTCRELKTKLEEQPKNAMASVASSATS 170
Query: 706 TESDRK 723
+ + K
Sbjct: 171 QKKEEK 176
>SB_45869| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 939
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 623 RKHHQRLKQKLIVNQKWKLSLCRQQLIKLNLIEKWR 730
RKHH RLK+ + N K LC L+ +L +WR
Sbjct: 22 RKHHTRLKEHTL-NSKQDYKLCNSSLVMKSL--EWR 54
>SB_24652| Best HMM Match : Kinesin (HMM E-Value=3)
Length = 351
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 332 ENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQPCSSDAHISVDD 493
+ G+ ++ NG D+N D +EDV K+ ++++E QP +S+ ++ D+
Sbjct: 255 KKGNAGKNGWNG-DSNDGIEEDGSLEDVEIKDIGNEKSTERQPMNSEPLLNGDE 307
>SB_54045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 332 ENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQPCSSDAHISVDD 493
+ G+ ++ NG D+N D +EDV K+ ++++E QP +S+ ++ D+
Sbjct: 55 KKGNAGKNGWNG-DSNDGIEEDGSLEDVEIKDIGNEKSTERQPMNSEPLLNGDE 107
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 320 SPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSE 451
SPE EN + +H+V + D D +WKE + + E
Sbjct: 430 SPEQENSRDNDHVVGEEVRKKRVSNDTLNSDGTWKENADDESEE 473
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = -2
Query: 743 DIRGVSTFLSDSVLSTAAGTVTISIFGSLSIFVLTSDG-----ASSSFISAVLFVPVLKS 579
D +S+ LSD + S+++ +V ++ SLS+F+ +S SSS +S L L S
Sbjct: 546 DFLTLSSLLSDFLTSSSSLSVFLTSSSSLSVFLTSSSSLSDFLTSSSSLSVFLTSSSLPS 605
Query: 578 DGVADSNCFALLSCTSIGVSLLVTT 504
D + S+ + +S +S+ T+
Sbjct: 606 DFLTSSSLPSDFLTSSSSLSVFPTS 630
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = -2
Query: 743 DIRGVSTFLSDSVLSTAAGTVTISIFGSLSIFVLTSDGASSSFISA 606
D +S+ LSD + S+++ +V ++ SLS+F LTS + S F+++
Sbjct: 791 DFLTLSSLLSDFLTSSSSLSVFLTSSSSLSVF-LTSSSSLSDFLTS 835
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 332 ENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQPCSSDAHISVDD 493
+ G+ ++ NG D+N D +EDV K+ ++++E QP +S+ ++ D+
Sbjct: 55 KKGNAGKNGWNG-DSNDGIEEDGSLEDVEIKDIGNEKSTERQPMNSEPLLNGDE 107
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 216 FTNPLYRKRGRCKRFQTFYQTILHCIVIKRVHVRIWRNI 100
F P Y KRGR + + Y I C+ + VH+ I R++
Sbjct: 211 FFGPFYVKRGRGRVSEKRYGCIFVCMNSRAVHLEIARSL 249
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 305 ARNCASPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQPCSSDAHIS 484
+RN SP+PE+ A NG++ NS ++ + Q+ E CS + HI+
Sbjct: 294 SRNAESPDPEHYKEATAANNGNNQNS------LIQSLLCGPIDTQKVREHLECSQETHIT 347
Query: 485 VDDVE 499
+E
Sbjct: 348 QKSIE 352
>SB_32130| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 446
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 287 GCKYQRARNCASPEPENGDNAEHLVNGSDNNSEYNVD 397
G K +R R CA+P P NG + V + + N D
Sbjct: 371 GGKQERTRTCANPSPSNG--GKDCVGDAKEEKDCNTD 405
>SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011)
Length = 434
Score = 28.3 bits (60), Expect = 7.1
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Frame = +1
Query: 451 TTTLLIRCSH-FCR*CGNQVVTKRDTPMEVQDNNAKQLESATPSDFKTGTNKTAEIKLEE 627
T LI C H FC+ C D M V+ + DFK K KLEE
Sbjct: 248 TPVALIPCGHTFCQMCTRDCRKCPDCQMRVKATAVNTVMQQIIGDFKAQKEKERLAKLEE 307
Query: 628 APSEVKTKIDSEPKMEIVTVPAAVDKTES 714
+ + ID + + + A D+ ES
Sbjct: 308 ---QTRKYIDEYQSLSLRS-RALADEAES 332
>SB_14335| Best HMM Match : DUF1315 (HMM E-Value=2.7)
Length = 1223
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +1
Query: 109 PYPNVDPFNYDTMKNSLIERLESFTSAPFT-VQRICELLT--YPRKQYNRV 252
P ++ PF++ T LIE+L F++ F V ++ L+ +PR +NR+
Sbjct: 507 PIASLKPFSFATNAPVLIEQLSWFSATSFVEVAKLYYRLSPLFPRSDWNRI 557
>SB_49093| Best HMM Match : rve (HMM E-Value=1.5e-17)
Length = 313
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 553 KQLESATPSDFKTGTNKTAEIKLEEAPSEVKTKIDSEPKMEIVTV 687
KQL+ P+D K ++ + EAP VK I S+ E+++V
Sbjct: 58 KQLQRDQPNDSKLLRANVSDSRRAEAPDRVKEPIYSKTGEEVLSV 102
>SB_44622| Best HMM Match : dsrm (HMM E-Value=3.1e-16)
Length = 724
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +2
Query: 290 CKYQ-RARNCASPE----PENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSE 451
C +Q R+ C SPE P + DN +N + N + + D ++ED S TE ++ E
Sbjct: 101 CFHQMRSLACQSPEDSGLPPDKDNVLTTLNTTWNENNGSTDDKVEDFSCVSPTETKSPE 159
>SB_8971| Best HMM Match : efhand (HMM E-Value=2.3e-11)
Length = 234
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +2
Query: 329 PENG---DNAEHLVNGSDNNSEYNVDVEMEDVSW 421
PE G D A+HL++GSD N++ ++ ++ + W
Sbjct: 178 PEKGESLDEAKHLIDGSDENADGDLQLDEILLHW 211
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,395,483
Number of Sequences: 59808
Number of extensions: 533163
Number of successful extensions: 2556
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2550
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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