Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0754
(756 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g17070.1 68418.m02000 expressed protein 33 0.20
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 32 0.36
At3g06340.1 68416.m00731 DNAJ heat shock N-terminal domain-conta... 31 0.62
At3g06540.1 68416.m00758 GDP dissociation inhibitor family prote... 31 0.83
At5g40450.1 68418.m04905 expressed protein 30 1.4
At4g39680.1 68417.m05614 SAP domain-containing protein contains ... 30 1.4
At4g31590.1 68417.m04487 glycosyl transferase family 2 protein s... 30 1.4
At3g28180.1 68416.m03521 glycosyl transferase family 2 protein s... 30 1.4
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 30 1.4
At2g20290.1 68415.m02370 myosin, putative similar to myosin (GI:... 30 1.9
At5g45250.1 68418.m05553 disease resistance protein (TIR-NBS-LRR... 29 2.5
At2g46240.1 68415.m05750 IQ domain-containing protein / BAG doma... 29 2.5
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 29 3.3
At3g61180.1 68416.m06847 zinc finger (C3HC4-type RING finger) fa... 29 4.4
At2g24630.1 68415.m02942 glycosyl transferase family 2 protein s... 29 4.4
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 28 5.8
At3g58230.1 68416.m06492 hypothetical protein 28 7.7
>At5g17070.1 68418.m02000 expressed protein
Length = 277
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 22 WPLVKSLFKEKLLNVITDFYDTTPNTDIPPYPNVDPFNYDTMKNSLIERLESFTSAP-FT 198
W ++K L V++++ + + +P Y + + L E L F P FT
Sbjct: 79 WEILKGTLSYWLKKVLSEYSEAKMTDEQQKEALGEP--YSELVSRLDEALLRFDDGPPFT 136
Query: 199 VQRICELLTYPRKQYNRVESL 261
+QR+CE+L R Y ++ L
Sbjct: 137 LQRLCEILLAARSIYPKLSKL 157
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +1
Query: 508 VTKRDTPMEVQDNNAKQLESATP----SDFKTGTNKTAEIKL-EEAPSEVKTKIDSEPKM 672
VT+ P+EV + E+ P + + T + EIK EEAP E ++ E K
Sbjct: 41 VTESQAPVEVTTKDLVVEETEKPIEETEEAQVETPEVVEIKKDEEAPVETPVVVEDESKT 100
Query: 673 EIVTVPAAVDKTESDRKVETPLI 741
E V ++ E + E P++
Sbjct: 101 EEVVEAKKEEEVEEKKTEEAPVV 123
>At3g06340.1 68416.m00731 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 673
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 302 RARNCASPEPENGDNAEHLVNGSDNNSEYNVDVEME-DVSWKEATEQRNSEPQPCSSDAH 478
R++ S D+ LVN + S N+D E E + ++ T + +S + +
Sbjct: 339 RSKQKVSYNENLSDDDVDLVNDNGEGSGKNIDTEREKETEEEKQTNENHSSTESIDMNGK 398
Query: 479 ISVDDVET 502
I VD VET
Sbjct: 399 IEVDQVET 406
>At3g06540.1 68416.m00758 GDP dissociation inhibitor family protein
/ Rab GTPase activator family protein similar to
SP|P26374 Rab proteins geranylgeranyltransferase
component A 2 (Rab escort protein 2) {Homo sapiens};
contains Pfam profile PF00996: GDP dissociation
inhibitor
Length = 563
Score = 31.1 bits (67), Expect = 0.83
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 100 DIPPYPNVDPFNYD 141
DIPPYP +DP NYD
Sbjct: 3 DIPPYPPLDPSNYD 16
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Frame = +1
Query: 535 VQDNNAKQLESATPSDFKTGTNKTAEIKLEEAPSEVKT-----KIDS----EPKMEIVTV 687
V+ +LES PS+ T+KT + K+EE P E T ++D E K E V+V
Sbjct: 858 VEQMQKPKLES--PSEVSEETSKTVDEKIEEKPEEEVTLYQEGQVDGSYGLETKEETVSV 915
Query: 688 PAAVDKTESDRK 723
P +++ E ++
Sbjct: 916 PESIELEEQPQE 927
>At4g39680.1 68417.m05614 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 633
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 526 PMEVQDNNAKQLESATPSDFKTGTNKTAEIKLEEAPSEVKTKIDSEPKMEIVTVPAAV 699
P+ V D N Q TP + T +T + E+ P +TKI +E + T PA V
Sbjct: 77 PVTVGDRN--QTTPVTPVEAAFST-ETTPVTAEKTPEPTQTKITTEASAGVETTPAPV 131
>At4g31590.1 68417.m04487 glycosyl transferase family 2 protein
similar to cellulose synthase from Agrobacterium
tumeficiens [gi:710492] and Agrobacterium radiobacter
[gi:710493]; contains Pfam glycosyl transferase, group 2
family protein domain PF00535
Length = 692
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 754 LPRWILEVSPLFYQIQFYQLLPAQ*QFPFLVHY 656
LP W++ P+F + F LLP+ FPF+V Y
Sbjct: 522 LPVWVICYIPVF--MSFLNLLPSPKSFPFIVPY 552
>At3g28180.1 68416.m03521 glycosyl transferase family 2 protein
similar to beta-(1-3)-glucosyl transferase GB:AAC62210
GI:3687658 from [Bradyrhizobium japonicum], cellulose
synthase from Agrobacterium tumeficiens [gi:710492] and
Agrobacterium radiobacter [gi:710493]; contains Pfam
glycosyl transferase, group 2 family protein domain
PF00535
Length = 673
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 754 LPRWILEVSPLFYQIQFYQLLPAQ*QFPFLVHY 656
LP WI+ P+F I +LP+ FPFLV Y
Sbjct: 494 LPLWIICYVPIF--ISLLNILPSPKSFPFLVPY 524
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +1
Query: 496 GNQVVTKRDTPMEV-QDNNAKQLESATPSDFKTGTNKTAEIKLEEAPSEVKTKIDSEPKM 672
G K P +V Q N + + ++ +TG+ K + K+EE +V + K
Sbjct: 381 GKVAAKKVPLPSKVGQTNQSVVISLSSSGRARTGSRKRSRTKMEETDHDVSSVATQPAKK 440
Query: 673 EIV--TVPAAVDKTESDRKVETPLIST 747
+ V T PA D T+S+ K I T
Sbjct: 441 QTVKKTNPAKEDLTKSNVKKHEDGIKT 467
>At2g20290.1 68415.m02370 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1493
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +1
Query: 532 EVQDNNAKQLESATPSDFKTGTNKTAEIKLEEAPSEVKTKIDSEPKMEIVTVPAAVDKTE 711
E + + ++L+ A ++ K KTA LEE EVK + ++ K ++T P KT
Sbjct: 1007 ETKKISEERLKKALDAENKIDNLKTAMHNLEEKLKEVKLE-NNFLKESVLTTPV---KTA 1062
Query: 712 SDRKVETPL 738
S R + TPL
Sbjct: 1063 SGRFLSTPL 1071
>At5g45250.1 68418.m05553 disease resistance protein (TIR-NBS-LRR
class), putative (RPS4) domain signature TIR-NBS-LRR
exists, suggestive of a disease resistance protein.
Identical to RPS4 (GI:11357255). False intron created at
intron 2 to escape a frameshift in the BAC sequence.
Length = 1217
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 133 NYDTMKNSLIERLESFTSAPFT--VQRICELLTYPRKQYN 246
N+ T + E LE T QR C+LL+Y RK+YN
Sbjct: 912 NHSTFIFTNCENLEQAAKEEITSYAQRKCQLLSYARKRYN 951
>At2g46240.1 68415.m05750 IQ domain-containing protein / BAG
domain-containing protein contains Pfam profiles
PF00612: IQ calmodulin-binding motif, PF02179: BAG
(Apoptosis regulator Bcl-2 protein) domain
Length = 1043
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +1
Query: 544 NNAKQLESATPSDFKTGTNKTAEIKLEEAPSEVKTKIDSEPKMEIVTVPAA 696
N + LES PSD + + K +E E D+E K ++ +P A
Sbjct: 353 NEGRNLESC-PSDLHRNEGQITQAKGKEGNFECNVLSDAEEKSSVINIPVA 402
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 320 SPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNS 448
S + E+ D +EH+ GSDNN E+ D ED EA E+ +S
Sbjct: 101 SIDNEDDDGSEHV--GSDNNEEHGSD---EDSERGEAVEESDS 138
>At3g61180.1 68416.m06847 zinc finger (C3HC4-type RING finger)
family protein low similarity to RNF6 protein [Mus
musculus] GI:20530241; contains Pfam profile PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 379
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +2
Query: 281 HFGC---KYQRARNCASPEPENGDNAEH-LVNGSDNNSE-YNVDVEMED 412
H GC +Y+R R SP P D++ H ++GS++ S+ Y+++ +D
Sbjct: 129 HVGCVIAEYKRRRVANSPPPSGEDSSNHESLSGSEDESDGYSINNTDDD 177
>At2g24630.1 68415.m02942 glycosyl transferase family 2 protein
similar to cellulose synthase from Agrobacterium
tumeficiens [gi:710492] and Agrobacterium radiobacter
[gi:710493]; contains Pfam glycosyl transferase, group 2
family protein domain PF00535
Length = 690
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 754 LPRWILEVSPLFYQIQFYQLLPAQ*QFPFLVHY 656
LP W++ P+F + +LPA FPF+V Y
Sbjct: 522 LPIWVICYVPIFMSL--LNILPAPKSFPFIVPY 552
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 529 MEVQDNNAKQLESATPSDFKTGTNKTAEIKLEEAPSEVKTKIDSEPKMEIVTVPAAVDKT 708
+ +Q+ +A + TP K + + + +EA + K KIDS K + V K
Sbjct: 101 ISLQEESAGESSEGTPEPPKGKGKASLKGRTDEAMPKKKQKIDSSSKSKAKEVEKKASKP 160
Query: 709 ESDR 720
E+++
Sbjct: 161 ETEK 164
>At3g58230.1 68416.m06492 hypothetical protein
Length = 153
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 398 VEMEDVSWKEATEQRNSEPQPCSSDAHISVDDV 496
VE V W TE +N E + S A + DDV
Sbjct: 120 VEQRRVLWALETELKNEENEAVSDSARLGFDDV 152
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,037,106
Number of Sequences: 28952
Number of extensions: 367314
Number of successful extensions: 1168
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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