Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0752
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D573E6 Cluster: PREDICTED: hypothetical protein;...    42   0.015
UniRef50_Q4XUE6 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_Q7S8Q1 Cluster: Putative uncharacterized protein NCU086...    33   8.9  

>UniRef50_UPI0000D573E6 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 501

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 23/42 (54%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
 Frame = +2

Query: 404 PLFDPPHLLKGVRNNLLIKDALF--VQDGVMKR--AKWDILE 517
           PLFDPPHLLK  RN LL +D  F  V  G  KR  AKW  ++
Sbjct: 340 PLFDPPHLLKAFRNGLLERDCQFTYVVRGQQKRGVAKWAYIQ 381


>UniRef50_Q4XUE6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 157

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 21/51 (41%), Positives = 28/51 (54%)
 Frame = -2

Query: 444 FLTPFNKCGGSNRGNIFFPPISMAFSM*SPCPSFKYFSLVS*CKFFSALTF 292
           F+   + C  SN   + F  IS+  S  S C SF  FSL S C FFS+++F
Sbjct: 106 FICSVSLCFSSNSFCLLF--ISLCLSSKSFCFSFSSFSLFSMCFFFSSISF 154


>UniRef50_Q7S8Q1 Cluster: Putative uncharacterized protein
           NCU08652.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU08652.1 - Neurospora crassa
          Length = 715

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +3

Query: 228 SMNNMIKLEVYHTELFAIKPGQMSTH*RTY 317
           S+  M++LE+Y++ +F I PG  S H  TY
Sbjct: 462 SIRQMLELEMYYSHVFCISPGIRSPHLSTY 491


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,024,514
Number of Sequences: 1657284
Number of extensions: 12024407
Number of successful extensions: 23185
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23171
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)