Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0752
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.79 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.5  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   7.3  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   7.3  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 466 FICAGWCHEASKMGYIRMLLDVDDGDDEIR 555
           F C   C EA+K  ++   + +D  D+E R
Sbjct: 155 FRCTKLCKEANKTAFLWYHIKIDREDEEAR 184


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 463 CFICAGWCHEASKMGYIRMLLDVDDGDDEI 552
           C +C    HE SK G   ++  ++  D EI
Sbjct: 650 CHVCCSTIHEVSKAG--ELIHKIETNDHEI 677


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 511 IRMLLDVDDGDDEIRLVHKLTE 576
           +++  D  DG+DE R    LTE
Sbjct: 18  VKVFKDEGDGEDEKRSSENLTE 39


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/22 (27%), Positives = 17/22 (77%)
 Frame = +2

Query: 50  CENIRRLDIEKL*KFIIKNQHA 115
           C + +++ +EK+ +F+IK +++
Sbjct: 75  CNDHQKVSVEKVIRFLIKERNS 96


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/22 (27%), Positives = 17/22 (77%)
 Frame = +2

Query: 50  CENIRRLDIEKL*KFIIKNQHA 115
           C + +++ +EK+ +F+IK +++
Sbjct: 75  CNDHQKVSVEKVIRFLIKERNS 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,003
Number of Sequences: 336
Number of extensions: 3372
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)