Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0752
         (700 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0565 - 4926137-4926847,4926928-4927257                           31   1.2  
08_01_0692 + 6121443-6122266,6122812-6124798                           29   2.7  
11_06_0738 - 26807046-26807129,26807720-26807957,26809374-268115...    29   4.7  
11_04_0301 + 16142236-16142945,16143748-16144247,16144557-161446...    28   6.2  
02_01_0610 + 4564016-4564018,4564166-4564243,4564764-4564788,456...    28   6.2  
05_03_0401 - 13529818-13529933,13530145-13530394                       28   8.2  

>05_01_0565 - 4926137-4926847,4926928-4927257
          Length = 346

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +2

Query: 530 WMMVMTK--LD*SIN*RKHMVIKEKXPKMKSEICCTIFSPRVSSAMRFLAKHKYFLR 694
           W  VM+K  LD  +  +K M  K K  KM    C T+ + R  +       H++F R
Sbjct: 17  WPTVMSKFVLDWYLQKKKEMPPKTKFKKMHHHYCTTVLNARFETTFTVDQVHRHFRR 73


>08_01_0692 + 6121443-6122266,6122812-6124798
          Length = 936

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 425 LLKGVRNNLLIKDALFVQDGVMKRAKWDILECCW 526
           ++ G+R  L  K  L V D + KR  WDI+ C +
Sbjct: 263 IIDGIRYYLGNKRYLIVVDDLWKREAWDIISCAF 296


>11_06_0738 -
           26807046-26807129,26807720-26807957,26809374-26811509,
           26812145-26813253
          Length = 1188

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 425 LLKGVRNNLLIKDALFVQDGVMKRAKWDILEC 520
           L+  +R +L  K  L + DG+   + WD+++C
Sbjct: 358 LISSIRTHLQDKRYLIIIDGLWATSTWDVIKC 389


>11_04_0301 +
           16142236-16142945,16143748-16144247,16144557-16144649,
           16144879-16145005,16145265-16145468,16145587-16145692
          Length = 579

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 489 MTPSCTNKASLISKLFLTPFNKC 421
           +T SCT+  +++ + FLTPF  C
Sbjct: 497 LTDSCTDSLTVLKRRFLTPFLLC 519


>02_01_0610 +
           4564016-4564018,4564166-4564243,4564764-4564788,
           4564870-4564902,4565034-4565155,4565230-4565360,
           4565509-4565732,4565824-4566065,4566268-4566357
          Length = 315

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
 Frame = +3

Query: 186 IDQPQLLSG---IVPPSSMNNMIKLEVYHTELFAI 281
           ID+PQL +G   I+PPS+++ +  L + +  LF +
Sbjct: 25  IDKPQLETGDKIIMPPSALDRLASLHIEYPMLFEV 59


>05_03_0401 - 13529818-13529933,13530145-13530394
          Length = 121

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +2

Query: 578 HMVIKEKXPKMKSEICCTIFSPRVS 652
           H++ +++  K+KS +CC +  PRV+
Sbjct: 10  HIMNQQEDIKIKSSMCCNLIRPRVT 34


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,937,293
Number of Sequences: 37544
Number of extensions: 325039
Number of successful extensions: 668
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)