Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0751
(539 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0510 - 16659486-16659564,16659772-16659947,16660464-166607... 93 2e-19
02_03_0270 + 17135464-17135467,17135583-17135655,17136253-171365... 91 5e-19
07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,352... 33 0.15
03_02_0259 - 6920472-6920579,6920744-6921022,6921115-6921390,692... 31 0.78
03_02_0260 - 6924532-6924757,6925443-6925546,6925729-6926007,692... 30 1.0
03_01_0350 - 2753217-2754152 29 3.1
03_05_0936 - 28955486-28955683,28956320-28956424,28956550-289566... 28 4.1
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 28 4.1
10_08_0663 - 19666476-19667017,19667664-19667755,19668039-196680... 28 5.5
04_03_0549 - 17043135-17043351,17043641-17043846 27 7.2
01_06_0657 - 30940020-30940034,30940226-30940861 27 7.2
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 27 9.6
07_01_0556 - 4136000-4136608 27 9.6
07_01_0251 + 1874148-1874311,1874367-1874429,1874484-1874709,187... 27 9.6
03_06_0019 - 31078669-31080081 27 9.6
03_02_0009 + 4891545-4892147,4892757-4893308 27 9.6
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801... 27 9.6
>04_03_0510 -
16659486-16659564,16659772-16659947,16660464-16660797,
16661564-16661636,16661780-16661783
Length = 221
Score = 92.7 bits (220), Expect = 2e-19
Identities = 67/174 (38%), Positives = 92/174 (52%), Gaps = 11/174 (6%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEE--EV*VRASRCKHQARPSANPLRSFTW-WKY*VPC 190
MGISRD HKRRATG + A ++ E+ + + K + + +R K+
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNLKWRALR 60
Query: 191 AASGHR*LLLGIGMFNSQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHY 370
+G+ G + LDVVYNASNNELVRT+TLVK+AIV VDA PF+QWY +HY
Sbjct: 61 LDTGN--YSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHY 118
Query: 371 TLPLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALE 508
+ +GRKK A+ E E A K+S RK RQ+ ++ +E
Sbjct: 119 GVDIGRKKKAPAAKKDAAEGQEGEAATEEAKKSNHVVRKLEKRQQTRTLDSHIE 172
Score = 90.6 bits (215), Expect = 7e-19
Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 242
GK+ RKKRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TR
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNLKWRALRLDTGNYSWGSEAVTR 75
Query: 243 KTRIL 257
KTRIL
Sbjct: 76 KTRIL 80
>02_03_0270 +
17135464-17135467,17135583-17135655,17136253-17136583,
17136916-17136969,17137219-17137394,17137607-17137685
Length = 238
Score = 91.1 bits (216), Expect = 5e-19
Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 242
GK+ RKKRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TR
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTR 75
Query: 243 KTRIL 257
KTRIL
Sbjct: 76 KTRIL 80
Score = 88.2 bits (209), Expect = 4e-18
Identities = 63/145 (43%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGISRD HKRRATG + A ++ + R + S+N T + V
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKY--ELGRQPANTKLSSNK----TVRRVRVRGGNV 54
Query: 200 GHR*LLLGIGMFN-------SQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWY 358
R L L G ++ + LDVVYNASNNELVRT+TLVK+AIV VDA PF+QWY
Sbjct: 55 KWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWY 114
Query: 359 ESHYTLPLGRKKGAKLT--EAEEAI 427
+HY + +GRKK A +AE A+
Sbjct: 115 LTHYGVDIGRKKKAPAAKKDAEHAL 139
>07_01_0467 -
3524598-3524837,3524939-3525466,3526242-3526892,
3527015-3527500,3527580-3527792,3527885-3528174,
3528276-3528418,3528633-3528855,3528983-3529160,
3529598-3529867
Length = 1073
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +3
Query: 63 AGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSR----GGNTKYRALRLDTGN-FSWGS 227
AG+ R+ +LG P+ +T+ P+R+ S+++R K+ A DTG F+WGS
Sbjct: 261 AGELFTWGSNREGQLGYPSVDTQPTPRRVSSLKARIISVAAANKHSAAVADTGEVFTWGS 320
>03_02_0259 -
6920472-6920579,6920744-6921022,6921115-6921390,
6921473-6921691,6921795-6921963,6922248-6922422,
6922490-6922601,6923343-6923573
Length = 522
Score = 30.7 bits (66), Expect = 0.78
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 366 CDSYHCLNGVASTTTIAFLTRVFVRTNSLLDALYTTSRYGFCELNIPIP 220
C Y L GV S IA L+ + R SL+ + + YG L +P+P
Sbjct: 426 CFDYLSLGGVFSNGPIALLSGLNPRPLSLVAHFFAVAIYGVGRLMLPVP 474
>03_02_0260 -
6924532-6924757,6925443-6925546,6925729-6926007,
6926093-6926368,6926460-6926678,6926758-6926926,
6927208-6927382,6927489-6927600,6929566-6929820
Length = 604
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 366 CDSYHCLNGVASTTTIAFLTRVFVRTNSLLDALYTTSRYGFCELNIPIP 220
C Y L GV S IA L+ + R SL+ + + YG L +P+P
Sbjct: 434 CFDYLSLGGVFSNGPIALLSGLNPRPLSLVAHFFAVAIYGVGRLMLPLP 482
>03_01_0350 - 2753217-2754152
Length = 311
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 42 GISEGPPAGKRAPIRKKRKYELGRPAANTR 131
G + PPA KR P R+++ +G A +TR
Sbjct: 242 GAAAAPPATKRTPQRRRKPESVGDEAIDTR 271
>03_05_0936 -
28955486-28955683,28956320-28956424,28956550-28956693,
28957078-28957356,28957480-28957587,28958288-28958567,
28958724-28960029,28961301-28962342
Length = 1153
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +3
Query: 15 LRWVLVGITGISEGPPAGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRAL 194
LR L G S GP +R K+ + G A + GP+ SVRS + ++
Sbjct: 24 LRGELNGRGDASNGPTVQRRVAEPKEDDEQDGSEAGSNA-GPRGAASVRSADSSREFIVK 82
Query: 195 RLDTGNFSWGSE 230
+D G GS+
Sbjct: 83 EIDVGGLPNGSD 94
>02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 147 IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRILMLC 266
+H+ R G+ +Y R G F G +C TR + +LC
Sbjct: 1523 VHASTCRSGSCQYPNCRKVKGLFRHGMQCKTRASGGCVLC 1562
>10_08_0663 -
19666476-19667017,19667664-19667755,19668039-19668095,
19668304-19668447,19668567-19668613,19668733-19668791,
19668975-19669045,19669274-19669341,19669431-19669598,
19669885-19669944,19670075-19670251
Length = 494
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -2
Query: 298 CTHQFIVRCIIHNIKIRVLRVEHSDPQEKL--PVSRRSARYLVFPPRERTEWIR*GPSLV 125
C H+F ++C ++ RVE + P + P+ R P TE ++ +L
Sbjct: 316 CCHEFCIKCALYLCSTSNTRVEFTGPPGSIPCPLCRNGIMSFTKLPSTPTEGLKSSSALT 375
Query: 124 F 122
F
Sbjct: 376 F 376
>04_03_0549 - 17043135-17043351,17043641-17043846
Length = 140
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 370 IMRLIPLPEWSCIYYNNCILDKGL 299
++ L+ +P+WS +YY N +DK L
Sbjct: 72 LILLLLVPKWSIVYYLNSKIDKKL 95
>01_06_0657 - 30940020-30940034,30940226-30940861
Length = 216
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 34 GSLA*AKGHRLGNVRPYARRGSMS*GVPLQTPGSALSES 150
G++ A G+R+ P R GSMS G + GS++S S
Sbjct: 117 GTIGAAAGNRMRGFVPPGRGGSMSNGAGVVGHGSSMSHS 155
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 327 TTIAFLTRVFVRTNSLLDALYTTSRYGFCELNIPIPKRSYRCPD 196
T A V RT + L+A+ ++S +LN+P P YR D
Sbjct: 97 TAAAASGEVAARTAAQLEAVDSSSEDWKAQLNLPAPDTRYRTED 140
>07_01_0556 - 4136000-4136608
Length = 202
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 105 LGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNF 215
LG A+T R HS + RGG+T R + DT +F
Sbjct: 166 LGLILASTATWLARRHSAKVRGGSTVIRPVSGDTDDF 202
>07_01_0251 + 1874148-1874311,1874367-1874429,1874484-1874709,
1874830-1875081,1875158-1875267,1875720-1875815,
1875898-1875985,1876246-1876475,1876745-1876929,
1877136-1877335,1877592-1877924,1878058-1878159,
1878869-1879166,1879626-1879774,1879859-1880143,
1880531-1880728
Length = 992
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 89 LAYGRTFPSRWPFAYASDP 33
++Y R FPS+W A SDP
Sbjct: 948 MSYTRKFPSKWRAASGSDP 966
>03_06_0019 - 31078669-31080081
Length = 470
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 129 WCLQRDALTHTSSSCVWAH 73
WC QR L H S++C +H
Sbjct: 340 WCPQRRVLAHASTACFVSH 358
>03_02_0009 + 4891545-4892147,4892757-4893308
Length = 384
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 275 MHYTQHQDTGFAS*TFRSPREVTG 204
+H+T H + G A FR+P++ +G
Sbjct: 48 LHWTHHAENGTADVAFRAPQQSSG 71
>01_05_0361 +
21377080-21377281,21378619-21378705,21379862-21380134,
21380304-21380378,21380470-21380550,21380837-21381034,
21381145-21381234,21381310-21381467,21381619-21381741,
21381891-21382034,21382175-21382285,21382583-21382624,
21383043-21383261,21385319-21385627
Length = 703
Score = 27.1 bits (57), Expect = 9.6
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +3
Query: 39 TGISEGPPAGKRAPIRKKRKYEL 107
+G+ + PPA +R+P R K ++ +
Sbjct: 589 SGVGDAPPAWRRSPFRPKEEFRV 611
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,041,275
Number of Sequences: 37544
Number of extensions: 314081
Number of successful extensions: 1031
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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