Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0751
(539 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 147 2e-35
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 147 2e-35
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 147 2e-35
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 147 2e-35
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 139 7e-33
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 38 0.017
AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptas... 31 2.0
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 147 bits (356), Expect = 2e-35
Identities = 84/170 (49%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGISRD+WHKRR TG + + ++ + + + A P R T V
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELG----RPAANTKIGPRRIHT---VRVRGGNK 53
Query: 200 GHR*LLLGIGMFN-------SQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWY 358
+R L L +G F+ + +DVVYNASNNELVRTKTLVKN IV++D+TP+RQWY
Sbjct: 54 KYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113
Query: 359 ESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALE 508
ESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LE
Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLE 163
Score = 119 bits (286), Expect = 8e-27
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 245
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 246 TRIL 257
TRI+
Sbjct: 76 TRII 79
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 147 bits (356), Expect = 2e-35
Identities = 84/170 (49%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGISRD+WHKRR TG + + ++ + + + A P R T V
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELG----RPAANTKIGPRRIHT---VRVRGGNK 53
Query: 200 GHR*LLLGIGMFN-------SQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWY 358
+R L L +G F+ + +DVVYNASNNELVRTKTLVKN IV++D+TP+RQWY
Sbjct: 54 KYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113
Query: 359 ESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALE 508
ESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LE
Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLE 163
Score = 119 bits (286), Expect = 8e-27
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 245
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 246 TRIL 257
TRI+
Sbjct: 76 TRII 79
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 147 bits (356), Expect = 2e-35
Identities = 84/170 (49%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGISRD+WHKRR TG + + ++ + + + A P R T V
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELG----RPAANTKIGPRRIHT---VRVRGGNK 53
Query: 200 GHR*LLLGIGMFN-------SQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWY 358
+R L L +G F+ + +DVVYNASNNELVRTKTLVKN IV++D+TP+RQWY
Sbjct: 54 KYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113
Query: 359 ESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALE 508
ESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LE
Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLE 163
Score = 119 bits (286), Expect = 8e-27
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 245
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 246 TRIL 257
TRI+
Sbjct: 76 TRII 79
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 147 bits (356), Expect = 2e-35
Identities = 84/170 (49%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGISRD+WHKRR TG + + ++ + + + A P R T V
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELG----RPAANTKIGPRRIHT---VRVRGGNK 53
Query: 200 GHR*LLLGIGMFN-------SQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWY 358
+R L L +G F+ + +DVVYNASNNELVRTKTLVKN IV++D+TP+RQWY
Sbjct: 54 KYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113
Query: 359 ESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALE 508
ESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LE
Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLE 163
Score = 119 bits (286), Expect = 8e-27
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 245
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 246 TRIL 257
TRI+
Sbjct: 76 TRII 79
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 139 bits (336), Expect = 7e-33
Identities = 80/164 (48%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGISRD+WHKRR TG + + ++ + RP+AN
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKY--------ELGRPAANT-------------KIG 39
Query: 200 GHR*LLLGI-GMFNSQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTL 376
R + + G + +DVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY L
Sbjct: 40 PRRIHTVRVRGGCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 99
Query: 377 PLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALE 508
PLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LE
Sbjct: 100 PLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLE 143
Score = 67.7 bits (158), Expect = 2e-11
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTK 182
GKR P KKRKYELGRPAANT++GP+RIH+VR RGG T+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGCTR 54
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 38.3 bits (85), Expect = 0.017
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 404 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALE 508
LT EE I+NKKRS+K +KY R++ AK+ LE
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLE 35
>AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptase
protein.
Length = 523
Score = 31.5 bits (68), Expect = 2.0
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = -2
Query: 250 RVLRVEHSDPQEKLPVSRRSARYLVFPPRERTE----WIR*GPSLVFAAGRPNSYFLFLR 83
R R E PQ+ + V RS R L PPR RT+ W S AG + LR
Sbjct: 411 RTARCELRSPQQPVSVPGRSPRALWRPPRRRTQTPVAWCSCSASTAPLAG------VRLR 464
Query: 82 MGARFPAGGP 53
G PAG P
Sbjct: 465 AGLPAPAGAP 474
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,872,417
Number of Sequences: 237096
Number of extensions: 1739449
Number of successful extensions: 4240
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4236
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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