Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0750
(775 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9279| Best HMM Match : Piwi (HMM E-Value=0) 97 2e-20
SB_33705| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_49310| Best HMM Match : Piwi (HMM E-Value=4.9e-33) 52 5e-07
SB_35869| Best HMM Match : Piwi (HMM E-Value=4.6e-12) 38 0.007
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_41291| Best HMM Match : Piwi (HMM E-Value=0) 32 0.59
SB_30926| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_34720| Best HMM Match : Fibrinogen_C (HMM E-Value=7.8e-13) 29 3.2
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 29 3.2
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_34832| Best HMM Match : SAP (HMM E-Value=1.4e-07) 28 7.3
SB_6476| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_29292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_57657| Best HMM Match : PHD (HMM E-Value=0.0012) 28 9.6
SB_55596| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-05) 28 9.6
SB_29875| Best HMM Match : PHD (HMM E-Value=0.0014) 28 9.6
SB_23566| Best HMM Match : 7tm_1 (HMM E-Value=0.00015) 28 9.6
SB_20247| Best HMM Match : Keratin_B2 (HMM E-Value=0.1) 28 9.6
SB_15931| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 28 9.6
SB_13736| Best HMM Match : PHD (HMM E-Value=0.001) 28 9.6
SB_8052| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_53096| Best HMM Match : PHD (HMM E-Value=0.001) 28 9.6
SB_46260| Best HMM Match : CUB (HMM E-Value=7.3e-24) 28 9.6
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 28 9.6
>SB_9279| Best HMM Match : Piwi (HMM E-Value=0)
Length = 941
Score = 96.7 bits (230), Expect = 2e-20
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 NYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSA-MSIATKVAIQINCKLGGSPWTVDIP 432
N DRY++IKK C +++ VP+QVV +R +S K MS+ TK+ IQ+NCKLGG W VDIP
Sbjct: 483 NRKDRYDSIKKLCCLEKGVPSQVVVSRTLSKKQMLMSVCTKIGIQLNCKLGGEAWAVDIP 542
Query: 433 LPSLMVVGYDVCHDTRSKEKSF 498
L +LM+VG D HD+ K + +
Sbjct: 543 LKNLMIVGIDTYHDSSQKGRYY 564
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/79 (32%), Positives = 44/79 (55%)
Frame = +3
Query: 525 QMTQYYSIVNAHTSGEELSSHMGFNIASAVKKFREKNGTYPARIFIYRDGVGDGPIPYVH 704
Q +YYS SG+EL + + +A++++++ NG P +I ++RDGVGDG + V
Sbjct: 559 QKGRYYSRCTFQHSGQELVDGLKVCMTAALRQWQQINGVLPDKIIVFRDGVGDGQLRAVI 618
Query: 705 SHEVAEIKKNLAEIYAGVE 761
HEV +I + G +
Sbjct: 619 EHEVPQILSTFKQFQDGYD 637
>SB_33705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 846
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 265 DRYEAIKKKCTVDRAVPTQVVCARNMSSKSAM-SIATKVAIQINCKLGGSPWTVDIPLPS 441
DRY A+KK C V+ VP+QV+ ++ +S+ + + S+ K+A+QIN KLGG W +DIP S
Sbjct: 251 DRYAAVKKLCCVESPVPSQVIISKTISNPTKLRSVVQKIALQINVKLGGELWALDIPSRS 310
Query: 442 LMVVGYDVCHDTRSKEKSFG 501
LMV G DV HD +S G
Sbjct: 311 LMVCGIDVYHDKARGGRSVG 330
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/84 (30%), Positives = 49/84 (58%)
Frame = +3
Query: 489 KELRGLRATLDKQMTQYYSIVNAHTSGEELSSHMGFNIASAVKKFREKNGTYPARIFIYR 668
+ + GL ++++ +T++YS V + G+EL + + ++K+ + N P RI +YR
Sbjct: 327 RSVGGLVCSMNRSLTRWYSDVCFQSPGQELIDGLKMLLIKGIRKWHDVNNALPERIIVYR 386
Query: 669 DGVGDGPIPYVHSHEVAEIKKNLA 740
DGVGDG + V +EV + ++ A
Sbjct: 387 DGVGDGQLKVVAGYEVQQFEECFA 410
>SB_49310| Best HMM Match : Piwi (HMM E-Value=4.9e-33)
Length = 952
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +3
Query: 534 QYYSIVNAHTSGEELSSHMGFNIASAVKKFREKNGTYPARIFIYRDGVGDGPIPYVHSHE 713
+Y S V G+ELS + + + + ++ + NG P ++ +YRDGVG+G I V HE
Sbjct: 724 RYESRVMFQQPGQELSDSLNYAMTAMLRAYHRHNGRLPVKVKVYRDGVGEGQIEAVIQHE 783
Query: 714 VAEIKKNLAEIYAG 755
+ + + I G
Sbjct: 784 IQQFLQAFRSINTG 797
>SB_35869| Best HMM Match : Piwi (HMM E-Value=4.6e-12)
Length = 243
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 483 ERKELRGLRATLDKQMTQYYSIVNAHTSGEELSSHMGFNIASAVKKFREKNGTYPARIFI 662
+R + + ++D ++YY+ V T +E+ + + + + +F P RI
Sbjct: 69 KRPSVAAVVGSMDAHPSRYYASVRVQTHRQEIIAELAAMVRELLVQFYRSTRHKPQRIVF 128
Query: 663 YRDGVGDG 686
YRDGV +G
Sbjct: 129 YRDGVSEG 136
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 32.3 bits (70), Expect = 0.45
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 482 RKKRASGPSSHPRQTDDSVLFNRQCA-HFRRRTQLSHGFQYRVRCQKIPREKRDLPSPNL 658
R++ ASG S P + +S R+ + RRR + S + R R PR +R PSP
Sbjct: 836 RRRSASGSDSSPHRRSESPRDRRRRSPEHRRRREASPPRRDRKRYDSPPRRRRRSPSPP- 894
Query: 659 HLPRRCR 679
PRR R
Sbjct: 895 --PRRRR 899
>SB_41291| Best HMM Match : Piwi (HMM E-Value=0)
Length = 598
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Frame = +3
Query: 510 ATLDKQMTQYYSIVNAHTSGE-ELSSHMGFNIASAVKK-----FREKNGTYPARIFIYRD 671
A+LD+ ++Y + V T + + + + ++A VK+ ++E PARI YRD
Sbjct: 281 ASLDRNASRYCARVRPQTHMKCKQAQEIIVDLADMVKELMIEFYKENKKMKPARIIFYRD 340
Query: 672 GVGDG 686
GV +G
Sbjct: 341 GVSEG 345
>SB_30926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +1
Query: 463 VCHDTRSKEKSFGAFEPPSTNR*LSTIQSSMRTLPEKNSALTWVSISRPLSKNSARKTGP 642
V + R S PP TN +S + + TL K +A TW+ I R ++N R
Sbjct: 184 VAGEKRLHRLSRSRLPPPLTNPQVSGTKHAKATLTTKITASTWLPILRQETRNRGRPVVK 243
Query: 643 TQPESSFTATVS 678
+ E +S
Sbjct: 244 VREEEGCVQNLS 255
>SB_34720| Best HMM Match : Fibrinogen_C (HMM E-Value=7.8e-13)
Length = 168
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 564 SGEELSSHMG-FNIASAVKKFREKNGTYPARIFIYRDGVGDGPIPYVHSHE 713
+GE + G F+IAS K+R G Y A + I+ D V PY H+
Sbjct: 69 AGETAHAQYGHFSIASESDKYRLSVGGYSAVVIIFIDIVNTTITPYNDQHQ 119
>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 659
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 535 STIQSSMRTLPEKNSALTWVSISRPLSKNSARKTGPTQPESSFTATVSVMVQSHT 699
ST+ + T P+ +SA+ + ++P + ++ + TQPE+S T+ + T
Sbjct: 383 STVGHTTSTQPQTSSAVDHTTSTQPQTSSTTGSSTLTQPETSSTSNTGPTTSTQT 437
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 535 STIQSSMRTLPEKNSALTWVSISRPLSKNSARKTGPTQPESSFTATVSVMVQSHT 699
ST+ + T + +S + + ++P + ++ T TQP++S T S + Q T
Sbjct: 369 STVGDTTSTQTQTSSTVGHTTSTQPQTSSAVDHTTSTQPQTSSTTGSSTLTQPET 423
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 185 LSDRHDESQLSQGFSFENQHLRQFLL 108
LSDR D S + +GF +EN +R+ L+
Sbjct: 594 LSDREDVSLILKGFDYENAEVRKSLV 619
>SB_34832| Best HMM Match : SAP (HMM E-Value=1.4e-07)
Length = 1054
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 113 KTGGGVGFRMRSPDLVVIRHD-GPIEYANMCEEVIARKNPALILCVLARIMLIGMKP*KR 289
+ GGGV +R IR+D P + +C E+I + I+C + R +I +
Sbjct: 385 RNGGGVCLYVRDSHNYRIRNDLVPEDLEAVCVEIIKPNSKPFIVCTVYRPFIISSRDLNG 444
Query: 290 NAL 298
N L
Sbjct: 445 NML 447
>SB_6476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 293
Score = 28.3 bits (60), Expect = 7.3
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Frame = +3
Query: 402 WGFSVDSRYPTAVTDGG-RVRRVPRHSFERK-ELRGLRATL-DKQMTQYYSIVNAHTSGE 572
+ F +DS D G RVRR H E+ +L R L D +YY N + E
Sbjct: 10 YDFVLDSNIHVIQPDRGVRVRRWLSHEVEQLIDLFEERPCLWDVSNKEYYQKGNRQRAEE 69
Query: 573 ELSSHMGF---NIASAVKKFREKNG 638
E++ MG ++ S +K R + G
Sbjct: 70 EIAEQMGITLNDVKSKIKSLRSQLG 94
>SB_29292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 574 NSALTWVSISRPLSKNSARKTGPTQPESSFTATVSVMVQS 693
NS+ +W+ + ++ S +GP P+ ++ ++S VQS
Sbjct: 217 NSSCSWICCACDMANFSKSSSGPDIPDDNYYLSLSTSVQS 256
>SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 494 LFSFERVSWHTSYPTTISDGSGISTVHGEPP 402
+F+FE V W S P +G G V+G+ P
Sbjct: 513 IFNFEPVRWDYSLPAERPEGLGSLNVYGKHP 543
>SB_57657| Best HMM Match : PHD (HMM E-Value=0.0012)
Length = 363
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 574 NSALTWVSISRPLSKNSARKTGPTQPESSFTATVSVMVQS 693
NS+ +W+ + ++ S +GP P+ ++ ++S VQS
Sbjct: 93 NSSCSWICCACDVANFSKSSSGPDIPDDNYYLSLSTSVQS 132
>SB_55596| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-05)
Length = 412
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 306 SVYSAFLFYGFIPISIILARTHSIRAGFFLAITSSHILAYSIGP 175
+V + F F G I + T S RA +FL++T +L+ +GP
Sbjct: 10 AVAAVFGFLGNICVLFDSIFTSSFRAKYFLSLTGLDLLSSIVGP 53
>SB_29875| Best HMM Match : PHD (HMM E-Value=0.0014)
Length = 598
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 574 NSALTWVSISRPLSKNSARKTGPTQPESSFTATVSVMVQS 693
NS+ +W+ + ++ S +GP P+ ++ ++S VQS
Sbjct: 137 NSSCSWICCACDVANFSKSSSGPDIPDDNYYLSLSTSVQS 176
>SB_23566| Best HMM Match : 7tm_1 (HMM E-Value=0.00015)
Length = 356
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 306 SVYSAFLFYGFIPISIILARTHSIRAGFFLAITSSHILAYSIGP 175
+V + F F G I + T S RA +FL++T +L+ +GP
Sbjct: 10 AVAAVFGFLGNICVLFDSIFTSSFRAKYFLSLTGLDLLSSIVGP 53
>SB_20247| Best HMM Match : Keratin_B2 (HMM E-Value=0.1)
Length = 356
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 505 FEPPSTNR*LSTIQSSMRTLPEKNSALTWVSISRPLSKNSARKTGPTQPESSFTAT 672
F+P T QS+ T NS T+ + +RPL P Q S+FT T
Sbjct: 96 FQPTFTTTARPKSQSTSTTTARPNSLSTFTTTARPLQSTFTTTARPLQ--STFTTT 149
>SB_15931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 574 NSALTWVSISRPLSKNSARKTGPTQPESSFTATVSVMVQS 693
NS+ +W+ + ++ S +GP P+ ++ ++S VQS
Sbjct: 137 NSSCSWICCACDVANFSKSSSGPDIPDDNYYLSLSTSVQS 176
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +3
Query: 516 LDKQMTQYYSIVNAHTSGEELSSHMGFNIASAVKKFREKNGTYPARIFIYRDGVGDGPIP 695
LD+ T I + S + H+ S+V+KF E RI I + G G IP
Sbjct: 71 LDRGNTAVRDIQSRSGSQQVFVEHLDLASLSSVRKFAEVMNNKEERIHILINNAGVGFIP 130
Query: 696 YVHSHEVAEI 725
+ + + E+
Sbjct: 131 FRRTEDGFEM 140
>SB_13736| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 226
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 574 NSALTWVSISRPLSKNSARKTGPTQPESSFTATVSVMVQS 693
NS+ +W+ + ++ S +GP P+ ++ ++S VQS
Sbjct: 93 NSSCSWICCACDVANFSKSSSGPDIPDDNYYLSLSTSVQS 132
>SB_8052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -1
Query: 355 PTCYSCYERRLPASARLGLQCISFLWLHTYQHNSSQNAQYQGRIFPCNHFFTHISVFYRT 176
P+ YS E R+PA F +HT N+ + + C+H I ++R
Sbjct: 413 PSAYSS-ETRMPADRDPRYGDSPFFGIHTVVDNTGNIQALKYIVLKCHHSHIPIIKWWRQ 471
Query: 175 VMTNHN 158
+ NH+
Sbjct: 472 TIPNHH 477
>SB_53096| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 623
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 574 NSALTWVSISRPLSKNSARKTGPTQPESSFTATVSVMVQS 693
NS+ +W+ + ++ S +GP P+ ++ ++S VQS
Sbjct: 93 NSSCSWICCACDVANFSKSSSGPDIPDDNYYLSLSTSVQS 132
>SB_46260| Best HMM Match : CUB (HMM E-Value=7.3e-24)
Length = 830
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 574 NSALTWVSISRPLSKNSARKTGPTQPESSFTATVSVMVQS 693
NS+ +W+ + ++ S +GP P+ ++ ++S VQS
Sbjct: 678 NSSCSWICCACDVANFSKSSSGPDIPDDNYYLSLSTSVQS 717
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 574 NSALTWVSISRPLSKNSARKTGPTQPESSFTATVSVMVQS 693
NS+ +W+ + ++ S +GP P+ ++ ++S VQS
Sbjct: 56 NSSCSWICCACDVANFSKSSSGPDIPDDNYYLSLSTSVQS 95
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,077,805
Number of Sequences: 59808
Number of extensions: 591363
Number of successful extensions: 1661
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1659
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -