Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0750
(775 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.78
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.78
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.78
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.78
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 2.4
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 2.4
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 2.4
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.2
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 5.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 7.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 7.3
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 21 9.6
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 21 9.6
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.6
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.78
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 773 MPTFFDSCINFCQILFYLSNFMAMHVWD 690
M FF + F L +SN AM+VWD
Sbjct: 340 MLNFFTTSNGFRSTLPVVSNLTAMNVWD 367
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.0 bits (52), Expect = 0.78
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 773 MPTFFDSCINFCQILFYLSNFMAMHVWD 690
M FF + F L +SN AM+VWD
Sbjct: 309 MLNFFTTSNGFRSTLPVVSNLTAMNVWD 336
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.0 bits (52), Expect = 0.78
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 773 MPTFFDSCINFCQILFYLSNFMAMHVWD 690
M FF + F L +SN AM+VWD
Sbjct: 360 MLNFFTTSNGFRSTLPVVSNLTAMNVWD 387
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.0 bits (52), Expect = 0.78
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 773 MPTFFDSCINFCQILFYLSNFMAMHVWD 690
M FF + F L +SN AM+VWD
Sbjct: 309 MLNFFTTSNGFRSTLPVVSNLTAMNVWD 336
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 487 LSNECRGTRRTRPP 446
L+N+CR + TRPP
Sbjct: 17 LTNDCRYDKMTRPP 30
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 328 RLPASARLGLQCISFLW 278
RLPA +GL+C+ +L+
Sbjct: 387 RLPAIRSIGLKCLEYLF 403
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 328 RLPASARLGLQCISFLW 278
RLPA +GL+C+ +L+
Sbjct: 387 RLPAIRSIGLKCLEYLF 403
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 656 DSGWVGPVFLAEFFDSGRDIETHVRAEFFSGSVR-IDD*IVLSH 528
D W+ P++ + D G DI + G++ +D+ + +H
Sbjct: 67 DMFWLSPIYPSPMVDFGYDISNYTDVHPIFGTISDLDNLVSAAH 110
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 656 DSGWVGPVFLAEFFDSGRDIETHVRAEFFSGSVR-IDD*IVLSH 528
D W+ P++ + D G DI + G++ +D+ + +H
Sbjct: 67 DMFWLSPIYPSPMVDFGYDISNYTDVHPIFGTISDLDNLVSAAH 110
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 5.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 724 ISATSWLCTYGIGPSPTPSR*MKIRAG*VPFFSRNF 617
+S S T G P PTP++ ++RA + SR F
Sbjct: 373 LSGRSQKSTTGPPPGPTPAQKARMRALNIDRVSRVF 408
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 7.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3
Query: 351 VGYVNCYKSCYSN 389
+GY C SC++N
Sbjct: 100 IGYATCVLSCWTN 112
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 7.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3
Query: 351 VGYVNCYKSCYSN 389
+GY C SC++N
Sbjct: 153 IGYATCVLSCWTN 165
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +3
Query: 684 GPIPYVHSHEVAEIKKNLAEIYAGVEKSW 770
G P E +IKK L+ I K W
Sbjct: 78 GACPQCSPEETRQIKKVLSHIQRTYPKEW 106
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +3
Query: 684 GPIPYVHSHEVAEIKKNLAEIYAGVEKSW 770
G P E +IKK L+ I K W
Sbjct: 78 GACPQCSPEETRQIKKVLSHIQRTYPKEW 106
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = -3
Query: 665 VNEDSGWVGPVFLAEFFDSGRDIETHVRAEFFSGSVRIDD*IV 537
+ D+ W+ P++ + D G DI + G++ D +V
Sbjct: 64 IGADALWLSPIYKSPQVDFGYDISNFTDVDPVYGTLADFDRLV 106
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,388
Number of Sequences: 438
Number of extensions: 5295
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -