Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0750
         (775 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to S...    39   0.004
At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to S...    39   0.004
At2g27880.1 68415.m03380 argonaute protein, putative / AGO, puta...    38   0.006
At5g43810.1 68418.m05357 pinhead protein (PINHEAD) / zwille prot...    36   0.030
At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi do...    31   1.1  
At1g31280.1 68414.m03828 PAZ domain-containing protein / piwi do...    31   1.1  
At4g21490.1 68417.m03107 pyridine nucleotide-disulphide oxidored...    30   1.5  
At3g04110.1 68416.m00435 glutamate receptor family protein (GLR1...    29   2.6  
At2g34780.1 68415.m04270 expressed protein                             29   3.4  
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ...    29   4.5  
At4g04390.1 68417.m00627 Ulp1 protease family protein contains P...    28   6.0  
At1g04780.1 68414.m00474 ankyrin repeat family protein contains ...    28   6.0  
At5g59700.1 68418.m07484 protein kinase, putative similar to rec...    28   7.9  

>At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to
           SP|O04379 Argonaute protein (AGO1) {Arabidopsis
           thaliana}; contains Pfam profiles PF02171: Piwi domain,
           PF02170: PAZ domain
          Length = 1050

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = +3

Query: 621 FREKNGTYPARIFIYRDGVGDGPIPYVHSHEVAEIKKNLAEIYAGVE 761
           FR   G  P RI  YRDGV +G    V  +E+  I+K  A + AG +
Sbjct: 832 FRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQ 878


>At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to
           SP|O04379 Argonaute protein (AGO1) {Arabidopsis
           thaliana}; contains Pfam profiles PF02171: Piwi domain,
           PF02170: PAZ domain
          Length = 1048

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = +3

Query: 621 FREKNGTYPARIFIYRDGVGDGPIPYVHSHEVAEIKKNLAEIYAGVE 761
           FR   G  P RI  YRDGV +G    V  +E+  I+K  A + AG +
Sbjct: 830 FRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQ 876


>At2g27880.1 68415.m03380 argonaute protein, putative / AGO,
           putative similar to SP|O04379 Argonaute protein (AGO1)
           {Arabidopsis thaliana}; contains Pfam profiles PF02170:
           PAZ domain, PF02171: Piwi domain
          Length = 997

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +3

Query: 621 FREKNGTYPARIFIYRDGVGDGPIPYVHSHEVAEIKK 731
           FR   G  P RI  YRDGV +G    V  HE+  I+K
Sbjct: 791 FRRATGQIPQRIIFYRDGVSEGQFSQVLLHEMTAIRK 827


>At5g43810.1 68418.m05357 pinhead protein (PINHEAD) / zwille protein
           (ZWILLE) identical to SP|Q9XGW1 PINHEAD protein (ZWILLE
           protein) {Arabidopsis thaliana}; contains Pfam profiles
           PF02171: Piwi domain, PF02170: PAZ domain
          Length = 988

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +3

Query: 591 GFNIASAVKKFREKNGTYPARIFIYRDGVGDGPIPYVHSHEVAEIKKNLAEI 746
           G  I   +  FR+  G  P RI  YRDGV +G    V  +E+  I+K  A +
Sbjct: 769 GGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASL 820


>At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi
            domain-containing protein contains Pfam profiles PF02170:
            PAZ domain, PF02171: Piwi domain
          Length = 1194

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/74 (24%), Positives = 33/74 (44%)
 Frame = +3

Query: 525  QMTQYYSIVNAHTSGEELSSHMGFNIASAVKKFREKNGTYPARIFIYRDGVGDGPIPYVH 704
            +  +Y + V A +  +E     G      ++   +     P +I I+RDGV DG    V 
Sbjct: 950  EANRYAARVKAQSHRKEEIQGFGETCWELIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVL 1009

Query: 705  SHEVAEIKKNLAEI 746
            + E+  +K   A++
Sbjct: 1010 NVELQNVKDVFAKV 1023


>At1g31280.1 68414.m03828 PAZ domain-containing protein / piwi
           domain-containing protein similar to SP|O04379 Argonaute
           protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD
           protein (ZWILLE protein) {Arabidopsis thaliana};
           contains Pfam profiles PF02171: Piwi domain, PF02170:
           PAZ domain
          Length = 1013

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = +3

Query: 525 QMTQYYSIVNAHTSGEELSSHMGFNIASAVKKFREKNGTYPARIFIYRDGVGDGPIPYVH 704
           +  +Y + V A    +E     G      VK   +  G  P +I I+RDGV D     V 
Sbjct: 770 EANRYAARVIAQPHRKEEIQGFGDACLELVKAHVQATGKRPNKIVIFRDGVSDAQFDMVL 829

Query: 705 SHEVAEIK 728
           + E+ ++K
Sbjct: 830 NVELLDVK 837


>At4g21490.1 68417.m03107 pyridine nucleotide-disulphide
           oxidoreductase family protein similar to GI:3718005
           alternative NADH-dehydrogenase {Yarrowia lipolytica};
           contains Pfam profile PF00070: Pyridine
           nucleotide-disulphide oxidoreductase
          Length = 568

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 23/102 (22%), Positives = 41/102 (40%)
 Frame = +3

Query: 285 KEMHCRPSRADAGSLRS*HE*QVGYVNCYKSCYSNKL*AWGFSVDSRYPTAVTDGGRVRR 464
           K+++CR  +      +   +    Y+       SN     G   +  +   V D  R+R 
Sbjct: 127 KKVYCRSKQGVNSKGKKEFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRS 186

Query: 465 VPRHSFERKELRGLRATLDKQMTQYYSIVNAHTSGEELSSHM 590
               SFE+  L GL     K+M  ++ +V    +G E +S +
Sbjct: 187 TVIDSFEKASLPGLNEQERKRML-HFVVVGGGPTGVEFASEL 227


>At3g04110.1 68416.m00435 glutamate receptor family protein (GLR1.1)
           (GLR1) identical to putative glutamate receptor (GLR1)
           GB:AF079998 [Arabidopsis thaliana]; plant glutamate
           receptor family, PMID:11379626
          Length = 808

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +3

Query: 465 VPRHSFERKELR--GLRATLDKQMTQYYSIVNAHTSGEELSSHMGFNIASAVKKFREKNG 638
           VP+ S E  +LR  G+   ++K+  Q    +N H++ EE++S    + AS    FRE  G
Sbjct: 713 VPKVSREIAKLRSLGMLKDMEKKWFQKLDSLNVHSNTEEVASTNDDDEASKRFTFRELRG 772

Query: 639 TY 644
            +
Sbjct: 773 LF 774


>At2g34780.1 68415.m04270 expressed protein
          Length = 1297

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -3

Query: 758  DSCINFCQILFYLSNFMAMHVWDWTITDTVA 666
            D  IN C IL  +        WDWT  + VA
Sbjct: 1137 DQSINLCDILSLVELIACYTAWDWTSANIVA 1167


>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
           ankyrin repeats, Pfam domain PF00023
          Length = 607

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 516 GWLEGPEALFFRTSVVAHVVPDHHQ*RQWDIYCPRRTPKL 397
           GW    EA+  R   +A ++  H+Q   W  +C RR P+L
Sbjct: 103 GWNALQEAVCSRQEAIAMIIVRHYQPLAWAKWC-RRLPRL 141


>At4g04390.1 68417.m00627 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain
          Length = 963

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +3

Query: 423 RYPTAVTDGGRVRRVPRHSFERKELRGLRATLDKQMTQYYSIVNAHTSGEELSSHMGFNI 602
           R  +A+  GGR R+  +    +K   G+R T    + +  SIVN   +   LS  +   +
Sbjct: 352 RKKSAMLKGGRGRKSAKQGRFKKNSTGIRRTQQNSIDEEESIVNVDMNA--LSRMLDAKL 409

Query: 603 ASAVKK 620
           A+  KK
Sbjct: 410 ATQYKK 415


>At1g04780.1 68414.m00474 ankyrin repeat family protein contains
           Pfam PF00023: Ankyrin repeat
          Length = 664

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -2

Query: 516 GWLEGPEALFFRTSVVAHVVPDHHQ*RQWDIYCPRRTPKLTVYLN 382
           GW    EA+  R   +A ++  H+Q   W  +C RR P+L   ++
Sbjct: 105 GWSALQEAICGREERIAMIIVRHYQPLAWAKWC-RRLPRLVATMH 148


>At5g59700.1 68418.m07484 protein kinase, putative similar to
           receptor-like protein kinase [Catharanthus roseus]
           gi|1644291|emb|CAA97692
          Length = 829

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -3

Query: 524 FVEGGSKAPKLF--SFERVSWHTSYPTTISDGSGISTVHGEPPSLQFI*IATFV 369
           FV G +K  K    S  R S HT YPT I +G  I  ++     L    I TF+
Sbjct: 342 FVTGSAKLTKRIRVSIGRSSVHTDYPTAILNGLEIMKMNNSKSQLS---IGTFL 392


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,003,330
Number of Sequences: 28952
Number of extensions: 393046
Number of successful extensions: 1117
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)