Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0746
         (786 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0875 - 23920023-23920967,23921045-23921599,23921678-239220...    30   1.8  
12_02_0723 - 22532379-22532902,22533060-22533135,22533195-225333...    29   3.2  
12_01_0394 - 3105306-3106596,3107815-3107861                           29   5.5  
11_04_0326 - 16401027-16401210,16401503-16401768                       28   9.7  
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707...    28   9.7  

>12_02_0875 -
           23920023-23920967,23921045-23921599,23921678-23922083,
           23922175-23922452
          Length = 727

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 590 DLLYREIPRRVFHTDTRKHGGITDQVHAQRLSLPHRSAQD 709
           D   RE  RR  +   R HGG+      +RLS  H+S QD
Sbjct: 437 DAKLREDSRRRVNVGGRNHGGVGGGEATKRLSRGHKSMQD 476


>12_02_0723 -
           22532379-22532902,22533060-22533135,22533195-22533380,
           22533459-22534323,22534740-22534918,22535168-22535542
          Length = 734

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 244 QAKRALDEVFKKYCDKSAQLKGCISSVLQGVRPCVGNEYANHINDAQNSTNQLID 408
           Q K+ L   F  YC  S  L   I+ +L+ +   +  +  +HI++    T QLID
Sbjct: 122 QVKKELKAKFDSYCFVSVSLNPDINKILKNILLQLDEKMYSHIDETW-ETKQLID 175


>12_01_0394 - 3105306-3106596,3107815-3107861
          Length = 445

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = +2

Query: 113 VTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNVHSTR 268
           ++ +C++++  D V E +   R    C++G +  NVL  E E+   NV ST+
Sbjct: 284 ISDECSEHSTVDHVNEFKLVKRKLEGCIQGRIP-NVLGRE-EDDIGNVESTK 333


>11_04_0326 - 16401027-16401210,16401503-16401768
          Length = 149

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 756 MALVLTERSLTVQINLSWAERCGKESLCA*T*SVIPPCLRVS 631
           M  V +ER   V + ++WA RC  E  C  T S  PP  +++
Sbjct: 1   MEEVASERMAAVAMTVTWAWRCRSEGRC--TASTPPPTKKLT 40


>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
            27771407-27771773,27772104-27772217,27772307-27772403,
            27772968-27773088,27773168-27773252,27773349-27773498,
            27773630-27773746,27773819-27773905,27773981-27774049,
            27774125-27774181,27774266-27774349,27774477-27774513,
            27774721-27774869,27776053-27776538,27776743-27776886,
            27776961-27777509,27778332-27778526,27779226-27779310,
            27779570-27779670,27779689-27780360,27781101-27781433,
            27781957-27782038,27782258-27782334,27782713-27782817,
            27783810-27783944,27784437-27785159,27785882-27786663,
            27787480-27789187
          Length = 2891

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 80   LADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVD 211
            +AD   QI+A V  + T   A +    V+ A  ++G+C+  L +
Sbjct: 1320 MADSNGQISAAVMERLTSAAAAEPYESVKHAFVSYGSCIADLAE 1363


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,511,735
Number of Sequences: 37544
Number of extensions: 421699
Number of successful extensions: 1098
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)