Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0746
         (786 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK022007-1|BAB13952.1|  602|Homo sapiens protein ( Homo sapiens ...    31   6.2  
AJ224877-1|CAB82785.1|  560|Homo sapiens Huntingtin Associated P...    31   6.2  
AJ012824-1|CAC09418.1|  671|Homo sapiens huntingtin-associated p...    31   6.2  
AF040723-1|AAC39861.1|  619|Homo sapiens neuroan1 protein.             31   6.2  
AB209105-1|BAD92342.1|  593|Homo sapiens huntingtin-associated p...    31   6.2  

>AK022007-1|BAB13952.1|  602|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11945 fis, clone HEMBB1000693, highly similar to
           Homo sapiens neuroan1 mRNA. ).
          Length = 602

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 11/44 (25%), Positives = 27/44 (61%)
 Frame = -3

Query: 682 ESLRMNLISDSAMFAGVGVEHSSRDFTIQEVISSTFAHFSTRLK 551
           E+ RMN+++ +   +G+G  H   ++ +Q++ +   AH+  +L+
Sbjct: 532 EATRMNVVTSALEASGLGPSHLDMNYVLQQLANWQDAHYRRQLR 575


>AJ224877-1|CAB82785.1|  560|Homo sapiens Huntingtin Associated
           Protein protein.
          Length = 560

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 11/44 (25%), Positives = 27/44 (61%)
 Frame = -3

Query: 682 ESLRMNLISDSAMFAGVGVEHSSRDFTIQEVISSTFAHFSTRLK 551
           E+ RMN+++ +   +G+G  H   ++ +Q++ +   AH+  +L+
Sbjct: 490 EATRMNVVTSALEASGLGPSHLDMNYVLQQLANWQDAHYRRQLR 533


>AJ012824-1|CAC09418.1|  671|Homo sapiens huntingtin-associated
           protein 1 protein.
          Length = 671

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 11/44 (25%), Positives = 27/44 (61%)
 Frame = -3

Query: 682 ESLRMNLISDSAMFAGVGVEHSSRDFTIQEVISSTFAHFSTRLK 551
           E+ RMN+++ +   +G+G  H   ++ +Q++ +   AH+  +L+
Sbjct: 601 EATRMNVVTSALEASGLGPSHLDMNYVLQQLANWQDAHYRRQLR 644


>AF040723-1|AAC39861.1|  619|Homo sapiens neuroan1 protein.
          Length = 619

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 11/44 (25%), Positives = 27/44 (61%)
 Frame = -3

Query: 682 ESLRMNLISDSAMFAGVGVEHSSRDFTIQEVISSTFAHFSTRLK 551
           E+ RMN+++ +   +G+G  H   ++ +Q++ +   AH+  +L+
Sbjct: 549 EATRMNVVTSALEASGLGPSHLDMNYVLQQLANWQDAHYRRQLR 592


>AB209105-1|BAD92342.1|  593|Homo sapiens huntingtin-associated
           protein 1 isoform 2 variant protein.
          Length = 593

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 11/44 (25%), Positives = 27/44 (61%)
 Frame = -3

Query: 682 ESLRMNLISDSAMFAGVGVEHSSRDFTIQEVISSTFAHFSTRLK 551
           E+ RMN+++ +   +G+G  H   ++ +Q++ +   AH+  +L+
Sbjct: 523 EATRMNVVTSALEASGLGPSHLDMNYVLQQLANWQDAHYRRQLR 566


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,884,544
Number of Sequences: 237096
Number of extensions: 2297508
Number of successful extensions: 9435
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9435
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)