Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0746
         (786 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    30   1.6  
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81586-1|CAB04690.1|  579|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   3.8  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      29   3.8  
Z75546-8|CAC42331.2|  640|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical ...    28   8.7  

>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +2

Query: 68  AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 181
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +2

Query: 68  AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 181
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>Z81586-1|CAB04690.1|  579|Caenorhabditis elegans Hypothetical
           protein T05F1.2 protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 754 GTSINGKKSNGANQSVLGRAVWQGESLRMNLIS 656
           G+ ++G  SNG   S  GR VW G +  +  IS
Sbjct: 518 GSGVSGTSSNGEVSSTPGRTVWHGGACALLQIS 550


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 367 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 462
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 367 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 462
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 367 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 462
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z75546-8|CAC42331.2|  640|Caenorhabditis elegans Hypothetical
           protein R05D11.9 protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -2

Query: 581 NFCAFFNKAQVIGGFHSGEALFQI*KHVLRFSVFCWKHSGPPSAMN 444
           NFC F  K+     F +   L  I   + +F VFC   +G P   N
Sbjct: 195 NFCNFVTKSCTTAQFTNANKLLLIRYLLKQFHVFCQFSTGDPEVDN 240


>AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.4 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 155 PEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 253
           PE E  +RT G+   G++D+N  +   + A+PN
Sbjct: 64  PEFEVEIRTNGHIYAGILDINGAEPGDKGAEPN 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,552,001
Number of Sequences: 27780
Number of extensions: 363405
Number of successful extensions: 965
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)