Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0742
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 1e-45
SB_56| Best HMM Match : Actin (HMM E-Value=0) 180 1e-45
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 180 1e-45
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 1e-45
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 3e-45
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 4e-45
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 154 8e-38
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 49 4e-06
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 43 2e-04
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_54| Best HMM Match : Actin (HMM E-Value=0) 36 0.043
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 30 1.6
SB_35821| Best HMM Match : TUDOR (HMM E-Value=0) 30 2.1
SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13) 29 2.8
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_45868| Best HMM Match : 7tm_3 (HMM E-Value=0) 29 4.9
SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 28 8.6
SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25) 28 8.6
SB_41368| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 180 bits (438), Expect = 1e-45
Identities = 94/140 (67%), Positives = 101/140 (72%)
Frame = -2
Query: 713 EKSYELPRRXRSSPSETKDSVAQRLSSNPRFLGMEACGIHETTYNSIMKVRRGHP*GLVR 534
EKSYELP + + + + P FLGME+ GIHETTYNSIMK L
Sbjct: 238 EKSYELPDGQVITIGNERFRCPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 296
Query: 533 QHRIVRWYPMYPGIADRMQKEITAXAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 354
+ MYPGIADRMQKEIT+ AP TMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 353 WISKQEYDESGPSIVHRKCF 294
WISKQEYDESGPSIVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 180 bits (438), Expect = 1e-45
Identities = 94/140 (67%), Positives = 101/140 (72%)
Frame = -2
Query: 713 EKSYELPRRXRSSPSETKDSVAQRLSSNPRFLGMEACGIHETTYNSIMKVRRGHP*GLVR 534
EKSYELP + + + + P FLGME+ GIHETTYNSIMK L
Sbjct: 237 EKSYELPDGQVITIGNERFRCPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 295
Query: 533 QHRIVRWYPMYPGIADRMQKEITAXAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 354
+ MYPGIADRMQKEIT+ AP TMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 296 NTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 355
Query: 353 WISKQEYDESGPSIVHRKCF 294
WISKQEYDESGPSIVHRKCF
Sbjct: 356 WISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 180 bits (437), Expect = 1e-45
Identities = 94/140 (67%), Positives = 101/140 (72%)
Frame = -2
Query: 713 EKSYELPRRXRSSPSETKDSVAQRLSSNPRFLGMEACGIHETTYNSIMKVRRGHP*GLVR 534
EKSYELP + + + + P FLGME+ GIHETTYNSIMK L
Sbjct: 238 EKSYELPDGQVITIGNERFRCPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 296
Query: 533 QHRIVRWYPMYPGIADRMQKEITAXAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 354
+ MYPGIADRMQKEI+A AP TMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 353 WISKQEYDESGPSIVHRKCF 294
WISKQEYDESGPSIVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 180 bits (437), Expect = 1e-45
Identities = 94/140 (67%), Positives = 102/140 (72%)
Frame = -2
Query: 713 EKSYELPRRXRSSPSETKDSVAQRLSSNPRFLGMEACGIHETTYNSIMKVRRGHP*GLVR 534
EKSYELP + + + L P FLGME+ GIHETTYNSIMK L
Sbjct: 211 EKSYELPDGQVITIGNERFRCPEALLQ-PSFLGMESSGIHETTYNSIMKCDVDIRKDLYA 269
Query: 533 QHRIVRWYPMYPGIADRMQKEITAXAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 354
+ MYPG+ADRMQKEI+A APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 270 NTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 329
Query: 353 WISKQEYDESGPSIVHRKCF 294
WISKQEYDESGP+IVHRKCF
Sbjct: 330 WISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 178 bits (434), Expect = 3e-45
Identities = 93/140 (66%), Positives = 101/140 (72%)
Frame = -2
Query: 713 EKSYELPRRXRSSPSETKDSVAQRLSSNPRFLGMEACGIHETTYNSIMKVRRGHP*GLVR 534
EKSYELP + + + + P FLGME+ GIHETTYNSIMK L
Sbjct: 200 EKSYELPDGQVITIGNERFRCPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 258
Query: 533 QHRIVRWYPMYPGIADRMQKEITAXAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 354
+ MYPGIADRMQKEI+A AP TMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 259 NTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 318
Query: 353 WISKQEYDESGPSIVHRKCF 294
WISKQEYDESGP+IVHRKCF
Sbjct: 319 WISKQEYDESGPAIVHRKCF 338
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 178 bits (433), Expect = 4e-45
Identities = 93/140 (66%), Positives = 101/140 (72%)
Frame = -2
Query: 713 EKSYELPRRXRSSPSETKDSVAQRLSSNPRFLGMEACGIHETTYNSIMKVRRGHP*GLVR 534
EKSYELP + + + + P FLGME+ GIHETTYNSIMK L
Sbjct: 237 EKSYELPDGQVITIGNERFRCPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 295
Query: 533 QHRIVRWYPMYPGIADRMQKEITAXAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 354
+ M+PGIADRMQKEI+A AP TMKIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 296 NTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 355
Query: 353 WISKQEYDESGPSIVHRKCF 294
WISKQEYDESGPSIVHRKCF
Sbjct: 356 WISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 154 bits (373), Expect = 8e-38
Identities = 81/140 (57%), Positives = 93/140 (66%)
Frame = -2
Query: 713 EKSYELPRRXRSSPSETKDSVAQRLSSNPRFLGMEACGIHETTYNSIMKVRRGHP*GLVR 534
EK+YELP S + + + P FLGMEA GIHE YN IMK L
Sbjct: 11 EKTYELPDGQVISIGNERFRCPEAMFQ-PAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYS 69
Query: 533 QHRIVRWYPMYPGIADRMQKEITAXAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 354
+ M+PGIADRMQKEI A ++MK+K+IAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 70 NCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQM 129
Query: 353 WISKQEYDESGPSIVHRKCF 294
WI+K+EY E GP IVHRKCF
Sbjct: 130 WIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = -2
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THR 282
P ++ ++I+ ++Y+VW GGS+LAS F + +K +YDE GPSI F HR
Sbjct: 287 PKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-LHR 343
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 565 CDVDIRKDLYANTVLSGGT 509
C +D+R+ LY N VLSGG+
Sbjct: 234 CPIDVRRPLYKNIVLSGGS 252
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = -2
Query: 617 GMEACGIHETTYNSIMKVRRGHP*GLVRQHRIVRWYPMYPGIADRMQKEITAXAPSTMKI 438
G A G+ + S+ GL + + G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 437 KIIA---PPERKYSVWIGGSILASL 372
K+I+ E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = -2
Query: 443 KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 321
KI+I PP RK+ V++GG++LA + W++++EY+E G
Sbjct: 358 KIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 699 TSPTXQVITIGNERFRCPEAFFQPSFL 619
T P +V+ + ERF PEA FQP +
Sbjct: 245 TLPDGRVVKLSGERFEAPEALFQPHLI 271
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 35.5 bits (78), Expect = 0.043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -1
Query: 693 PTXQVITIGNERFRCPEAFFQPSFLG 616
P Q I IG+ERFR E FQPS LG
Sbjct: 2288 PDGQSIRIGSERFRAAEPLFQPSLLG 2313
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3
Query: 568 KCDVDIRKDLYANTVLSG 515
KCD+D+R +L+ N VLSG
Sbjct: 2329 KCDIDLRAELFHNIVLSG 2346
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = -3
Query: 568 KCDVDIRKDLYANTVLSGGT 509
K D+D+R+ LY+N VLSGG+
Sbjct: 267 KSDLDLRRVLYSNIVLSGGS 286
>SB_35821| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 754
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = -3
Query: 412 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTG------SASKRTARRCLQQPAAA 251
S YG +S+P S+ +NK R + PPL +G ++ K A PA
Sbjct: 571 SAGYGKEAKSAPVSIAANKPFIRPSQDQQVMPPLISGIQAMCETSPKEQAIASANLPAVG 630
Query: 250 AQFRLVIS 227
F+L+++
Sbjct: 631 ETFQLIVT 638
>SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 157 RPALRPAVTITLITIISYVQLN 222
RP + PA T TLIT+I YV+++
Sbjct: 125 RPLMTPAKTGTLITVIDYVEID 146
>SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13)
Length = 1217
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 477 LHTVGDSRVHGVPPDNTVLAYKSLRMSTS--HFHDGVICGLVDAASFHTQETRVG 635
L T GD +H +PP +T L+ +SL S S F D V S + E +G
Sbjct: 949 LFTTGDDFLHNIPPISTSLSNQSLNNSFSIPSFQDTVDTSSHQGTSNFSAEALIG 1003
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 412 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSAS 293
STP +V PP PSN+ + +K S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -3
Query: 370 LPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQP 260
L C SR K P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_45868| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 604
Score = 28.7 bits (61), Expect = 4.9
Identities = 27/97 (27%), Positives = 39/97 (40%)
Frame = +1
Query: 313 MEGPDSSYSCFEIHICWKVEREARIDPPIHTEYFLSGGAMILIFIVDGAXAVISFCIRSA 492
+EG Y CF C +AR P + E G AM ++ I V SF +R++
Sbjct: 475 LEGTMLIYLCFISLFCTFYAFKARKLPENYNETRYIGFAMYILII----SWVTSFPVRAS 530
Query: 493 IPGYMGYHRTIRCWRTSPYGCPRRTFMMELYVVSWMP 603
+ G H S YG F +LY++ P
Sbjct: 531 LDGTYLTHIACATSLVSAYGILVCMFAPKLYIILLHP 567
>SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 340 KSTTSLAPPLYTGSASKRTARRCLQQPAAAAQFRL 236
K+T P++T S K+T R C++ P + R+
Sbjct: 18 KNTLRFIMPVFTRSGRKKTNRTCIEDPTPQTERRV 52
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 394 VDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSA-SKRTA 281
VD+S P SLP+ K G + S P GS+ SK TA
Sbjct: 1939 VDKSEPGSLPTVKFGVTTTADASSMPKFQFGSSGSKDTA 1977
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 334 TTSLAPPLYTGSASKRTARRCLQQPAAAA 248
T+S+AP +TG+++ A +Q PAAAA
Sbjct: 2185 TSSVAPFSFTGTSTTTAAATGIQAPAAAA 2213
>SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25)
Length = 1641
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 550 GCPRRTFMMELYVVSWMPQASIPKKR-GLEESLWATESFVSDGDDL 684
GC F+ L + W+ + S +KR G++ +LW ++ DDL
Sbjct: 318 GCLLSPFLF-LLAIDWIMKTSTDQKRNGIQWTLWKQLDYLDFADDL 362
>SB_41368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -1
Query: 432 HCSSREEVLRMDRWIDPRLPLYLPTNVDLETRVRRVWPLHCTQEVLLNAPRVAASSSP 259
HC+ +E L+ W + LP+ + V+R + L Q+VL P +S+SP
Sbjct: 228 HCNFWDEKLKEGDWEPEEIASKLPSFLSFVRDVQRNFSLGDEQDVLERPPPRWSSNSP 285
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,302,996
Number of Sequences: 59808
Number of extensions: 492427
Number of successful extensions: 1619
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1595
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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