BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0742 (714 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 149 2e-38 DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 5.0 >AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. Length = 133 Score = 149 bits (362), Expect = 2e-38 Identities = 81/123 (65%), Positives = 86/123 (69%) Frame = -2 Query: 713 EKSYELPRRXRSSPSETKDSVAQRLSSNPRFLGMEACGIHETTYNSIMKVRRGHP*GLVR 534 EKSYELP + + + L P FLGMEACGIHETTYNSIMK L Sbjct: 12 EKSYELPDGQVITIGNERFRCPEALFQ-PSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 70 Query: 533 QHRIVRWYPMYPGIADRMQKEITAXAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 354 + MYPGIADRMQKEITA APSTMKIKIIAPPE+KYSVWIGGSILASLSTFQQM Sbjct: 71 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTFQQM 130 Query: 353 WIS 345 WIS Sbjct: 131 WIS 133 >DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. Length = 552 Score = 22.2 bits (45), Expect = 5.0 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = +1 Query: 553 CPRRTFMMELYVVSWMPQASIPKKRGLEESLW 648 CP F+ +L + + + IPK++ E+SL+ Sbjct: 277 CPPAIFIFDLTTDTLIRKYIIPKEQVKEDSLY 308 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 201,328 Number of Sequences: 438 Number of extensions: 4448 Number of successful extensions: 8 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22048515 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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