Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0741
         (541 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M26679-1|AAA58663.1|  270|Homo sapiens HOX 1.3 protein.                31   3.4  
CR542277-1|CAG47073.1|  270|Homo sapiens HOXA5 protein.                31   3.4  
CR542256-1|CAG47052.1|  270|Homo sapiens HOXA5 protein.                31   3.4  
BT009744-1|AAP88746.1|  270|Homo sapiens homeo box A5 protein.         31   3.4  
BC013682-1|AAH13682.1|  270|Homo sapiens homeobox A5 protein.          31   3.4  

>M26679-1|AAA58663.1|  270|Homo sapiens HOX 1.3 protein.
          Length = 270

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -1

Query: 442 YGYHAVDEEVLYSGRSXIGNFSSGRRSRCY 353
           YGY+ +D  V   GRS  G+F SG R+R Y
Sbjct: 47  YGYNGMDLSV---GRSGSGHFGSGERARSY 73


>CR542277-1|CAG47073.1|  270|Homo sapiens HOXA5 protein.
          Length = 270

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -1

Query: 442 YGYHAVDEEVLYSGRSXIGNFSSGRRSRCY 353
           YGY+ +D  V   GRS  G+F SG R+R Y
Sbjct: 47  YGYNGMDLSV---GRSGSGHFGSGERARSY 73


>CR542256-1|CAG47052.1|  270|Homo sapiens HOXA5 protein.
          Length = 270

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -1

Query: 442 YGYHAVDEEVLYSGRSXIGNFSSGRRSRCY 353
           YGY+ +D  V   GRS  G+F SG R+R Y
Sbjct: 47  YGYNGMDLSV---GRSGSGHFGSGERARSY 73


>BT009744-1|AAP88746.1|  270|Homo sapiens homeo box A5 protein.
          Length = 270

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -1

Query: 442 YGYHAVDEEVLYSGRSXIGNFSSGRRSRCY 353
           YGY+ +D  V   GRS  G+F SG R+R Y
Sbjct: 47  YGYNGMDLSV---GRSGSGHFGSGERARSY 73


>BC013682-1|AAH13682.1|  270|Homo sapiens homeobox A5 protein.
          Length = 270

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -1

Query: 442 YGYHAVDEEVLYSGRSXIGNFSSGRRSRCY 353
           YGY+ +D  V   GRS  G+F SG R+R Y
Sbjct: 47  YGYNGMDLSV---GRSGSGHFGSGERARSY 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,148,736
Number of Sequences: 237096
Number of extensions: 1235004
Number of successful extensions: 2137
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2137
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)