Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0741
         (541 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024791-37|AAF60671.1|  196|Caenorhabditis elegans Hypothetical...    29   2.1  
AL031627-22|CAI79188.1|  213|Caenorhabditis elegans Hypothetical...    28   4.9  
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr...    27   6.5  

>AC024791-37|AAF60671.1|  196|Caenorhabditis elegans Hypothetical
           protein Y47G6A.26 protein.
          Length = 196

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 324 SEPISGSCKR*QRLRRPEEKFPIXERPLYR 413
           S+ +  SC R +R R P  ++ I ERPLYR
Sbjct: 122 SKLVDHSCSRPKRNRIPPLRYWIGERPLYR 151


>AL031627-22|CAI79188.1|  213|Caenorhabditis elegans Hypothetical
           protein Y102A5C.36 protein.
          Length = 213

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 8/27 (29%), Positives = 20/27 (74%)
 Frame = -1

Query: 223 NNIHPSRRRSMIXPWSSAWRRSFLNGP 143
           +++ PSR++ +  PW+++W+ + +N P
Sbjct: 101 SHVSPSRQQIIRKPWTTSWKPTRINYP 127


>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
           protein C27B7.7 protein.
          Length = 1471

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +1

Query: 112 RXMXAESSDKVAHLENYDAMLRTMXKSLNVCGKDGCYSEIQLDNXLLEKXTVQ 270
           R    +SS+ + HLEN++   +T  K+  +      +    +DN +  K  V+
Sbjct: 9   RFQMQQSSNILKHLENHEVFCKTELKTCQINDDSPLFISTSIDNSMNLKILVE 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,901,061
Number of Sequences: 27780
Number of extensions: 186706
Number of successful extensions: 395
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)