Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0740
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     25   0.65 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.6  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   6.1  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +2

Query: 38  GDHSSYA*FNEKTPNMTLCDFVPGCYY*YYKSIQRFSEHF 157
           G H   + + +  P +T C   PG  + Y+ ++     HF
Sbjct: 137 GHHQKNSPYMDGVPFVTQCPIHPGMTFRYHFNVHNSGTHF 176


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -3

Query: 574 QSWIRPWVKEYLVEATFHSTRDFIFT 497
           ++W  P+V   ++   FH+   F++T
Sbjct: 108 KAWFLPFVVTNIIFVLFHTYEAFVWT 133


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -3

Query: 586 PSWRQSWIRPWVKEYLVEATFHSTRDF 506
           PS+   W  P+  +YL  A  +    F
Sbjct: 31  PSYCDPWYNPYYYQYLQNAALYHKLQF 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,653
Number of Sequences: 336
Number of extensions: 2870
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)