Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0738
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038618-8|AAB92071.1| 276|Caenorhabditis elegans Iron-sulfur p... 154 8e-38
Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical... 29 4.0
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 7.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.0
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 7.0
AY825249-1|AAX24101.1| 728|Caenorhabditis elegans sodium-couple... 28 7.0
AL110485-24|CAB60372.4| 728|Caenorhabditis elegans Hypothetical... 28 7.0
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 9.2
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 9.2
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 9.2
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 9.2
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 9.2
AF016688-2|AAB66078.1| 649|Caenorhabditis elegans Hypothetical ... 28 9.2
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 9.2
>AF038618-8|AAB92071.1| 276|Caenorhabditis elegans Iron-sulfur
protein protein 1 protein.
Length = 276
Score = 154 bits (373), Expect = 8e-38
Identities = 66/90 (73%), Positives = 74/90 (82%)
Frame = +3
Query: 492 KTIVYPHRTADEISTEKAVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEF 671
K + HRT EI+ EKAVPV LR PQHDD+R Q +W VVIGVCTHLGCVP+A+AG++
Sbjct: 173 KPVFVKHRTKAEIAKEKAVPVADLRHPQHDDERVQKDEWSVVIGVCTHLGCVPIADAGDY 232
Query: 672 GGY*CPCHGSHYDASGRIRKGPAPLNLEVP 761
GGY CPCHGSHYDASGRIRKGPAPLNL VP
Sbjct: 233 GGYYCPCHGSHYDASGRIRKGPAPLNLHVP 262
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 235 PGFLGLPRKETQDPTSKANETIDERQSF-TYLIXXXXXXXXXXXXXXXXTHFVSSMSAAA 411
P R T++ A +T D+R++ T L VS + AA
Sbjct: 86 PDMSNYRRDSTKNTQVPARDTEDQRRALPTALYYGAGGVLSLWAGKEVVQTLVSYKAMAA 145
Query: 412 DVLALAKIEIKLAEIPEGKSVTFKWRGKPLFI 507
D ALA IEI +A+IPEGK+ TF+WRGKP+F+
Sbjct: 146 DQRALASIEINMADIPEGKTKTFEWRGKPVFV 177
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 149 GSLPIQGLKVKAGTRVPAQVRFAHTDISYPDFSAY 253
G + GL VK G V ++ R AHTD+++PD S Y
Sbjct: 59 GGVFTNGLAVK-GINVTSR-RLAHTDVTFPDMSNY 91
>Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical
protein R06C1.3 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 649 P*PMLVNSGVTN-VPATAPTTMLPDESAKAPPLST*KCPP 765
P P+L+N+ + + +PA AP+T+ E + APP + PP
Sbjct: 323 PPPLLMNTSIVHQLPAEAPSTIQFVEPSAAPPTNIPPPPP 362
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/71 (30%), Positives = 28/71 (39%)
Frame = +1
Query: 553 STRSVTLSTTINAPKTPSGWS*SAYAPTWDACP*PMLVNSGVTNVPATAPTTMLPDESAK 732
+T S T P+ + +A PT +A P P T P T P + K
Sbjct: 144 ATNSTVKPATAPVTPEPTVKNTTAAEPTTEAPPPP------TTKAPPPPTTKAPPPPTTK 197
Query: 733 APPLST*KCPP 765
APP T K PP
Sbjct: 198 APPPPTTKAPP 208
>AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical
protein Y54E2A.11a protein.
Length = 725
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 98 KTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVPAQVRFAHTDISYPDFSAY 253
+TV P S + T+H QG+ + G RFAHT++ Y DFS +
Sbjct: 207 ETVFTWSPHGSYLSTIHK----QGIILWGGKDYARAHRFAHTNVQYIDFSPW 254
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 553 STRSVTLSTTINAPKTPSGWS*SAYAPTWDACP*PMLVNSGVTNVPATAPTTMLP 717
+T + T +TT P TP + S PT P S PAT PTT +P
Sbjct: 694 TTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPA---SQPATQPATTPTTTIP 745
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 553 STRSVTLSTTINAPKTPSGWS*SAYAPTWDACP*PMLVNSGVTNVPATAPTTMLP 717
+T + T +TT P TP + S PT P S PAT PTT +P
Sbjct: 750 TTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPA---SQPATQPATTPTTTIP 801
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 553 STRSVTLSTTINAPKTPSGWS*SAYAPTWDACP*PMLVNSGVTNVPATAPTTMLP 717
+T + T +TT P TP + S PT P S PAT PTT +P
Sbjct: 573 TTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPA---SQPATQPATTPTTTIP 624
>AY825249-1|AAX24101.1| 728|Caenorhabditis elegans sodium-coupled
neutral amino acidtransporter protein.
Length = 728
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 531 STEKAVPVDTLRDPQHDDQ-RTQNPKWLVVIGVCTHLGCVPVANAGEFGGY 680
STE A+ VD +D R +N KW+VVI C+ L C+ + + G Y
Sbjct: 472 STEIAL-VDVFCSCIYDQYPRFRNRKWIVVIAWCSVLYCIGLVFSTRAGYY 521
>AL110485-24|CAB60372.4| 728|Caenorhabditis elegans Hypothetical
protein Y46G5A.30 protein.
Length = 728
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 531 STEKAVPVDTLRDPQHDDQ-RTQNPKWLVVIGVCTHLGCVPVANAGEFGGY 680
STE A+ VD +D R +N KW+VVI C+ L C+ + + G Y
Sbjct: 472 STEIAL-VDVFCSCIYDQYPRFRNRKWIVVIAWCSVLYCIGLVFSTRAGYY 521
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 684 ISNPRIHQHWLRARIPSGCIRRSRPT-TWGFGCVD 583
I++PR+H WLR P R +PT +GF +D
Sbjct: 3210 INDPRLHVEWLRNGAPLPEASRFKPTFEFGFVSLD 3244
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 684 ISNPRIHQHWLRARIPSGCIRRSRPT-TWGFGCVD 583
I++PR+H WLR P R +PT +GF +D
Sbjct: 3127 INDPRLHVEWLRNGAPLPEASRFKPTFEFGFVSLD 3161
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 684 ISNPRIHQHWLRARIPSGCIRRSRPT-TWGFGCVD 583
I++PR+H WLR P R +PT +GF +D
Sbjct: 3448 INDPRLHVEWLRNGAPLPEASRFKPTFEFGFVSLD 3482
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 684 ISNPRIHQHWLRARIPSGCIRRSRPT-TWGFGCVD 583
I++PR+H WLR P R +PT +GF +D
Sbjct: 3448 INDPRLHVEWLRNGAPLPEASRFKPTFEFGFVSLD 3482
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 684 ISNPRIHQHWLRARIPSGCIRRSRPT-TWGFGCVD 583
I++PR+H WLR P R +PT +GF +D
Sbjct: 3448 INDPRLHVEWLRNGAPLPEASRFKPTFEFGFVSLD 3482
>AF016688-2|AAB66078.1| 649|Caenorhabditis elegans Hypothetical
protein F18A12.6 protein.
Length = 649
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 493 KPLFILTGQQTKSRPRRLCLSTRSVTLSTTINAPKTPS 606
KP I + QT PR +C S +TL+ ++ K PS
Sbjct: 59 KPATIDSETQTVDEPRNVCESPECITLAHELHNYKDPS 96
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 684 ISNPRIHQHWLRARIPSGCIRRSRPT-TWGFGCVD 583
I++PR+H WLR P R +PT +GF +D
Sbjct: 3143 INDPRLHVEWLRNGAPLPEASRFKPTFEFGFVSLD 3177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,431,152
Number of Sequences: 27780
Number of extensions: 431880
Number of successful extensions: 1302
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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