Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0736
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   2.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   8.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.1  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 97  YQRNAFTILQIITRTRLWLNI 159
           Y +N +T+L  +T+  LW  +
Sbjct: 76  YVQNIYTVLTALTKKPLWFKL 96


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 97  YQRNAFTILQIITRTRLWLNI 159
           Y +N +T+L  +T+  LW  +
Sbjct: 76  YVQNIYTVLTALTKKPLWFKL 96


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 435 SLISHIIVEVVYDCC 391
           SL  + I+ V++DCC
Sbjct: 239 SLFGYQIILVIFDCC 253


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 240 PCSSLWTGRQ*GHNQIHRRWRKPSYGW 320
           PCS   T  Q    QIH++     Y W
Sbjct: 182 PCSINSTSSQPVGTQIHQQTNHTFYPW 208


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 395 AADSSSISNPHSEAISLYTSPAAAL 321
           ++ S S S+P   + S  TSPAA +
Sbjct: 36  SSSSPSGSSPQHSSSSASTSPAARM 60


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 395 AADSSSISNPHSEAISLYTSPAAAL 321
           ++ S S S+P   + S  TSPAA +
Sbjct: 36  SSSSPSGSSPQHSSSSASTSPAARM 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,555
Number of Sequences: 336
Number of extensions: 2201
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)