Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0736
         (494 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0771 + 5917550-5917829,5918390-5918526,5918617-5918742,591...    75   2e-14
04_03_0052 + 10257109-10257337,10257580-10257668,10257708-102582...    33   0.17 
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749...    29   1.6  

>07_01_0771 +
           5917550-5917829,5918390-5918526,5918617-5918742,
           5919168-5919221,5919344-5919457,5919895-5919950,
           5920017-5920058,5920580-5920655,5920765-5920836,
           5920908-5921033,5921117-5921221,5921333-5921416,
           5921636-5921683
          Length = 439

 Score = 75.4 bits (177), Expect = 2e-14
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = +2

Query: 74  LVLIDNLNIKETHSQFFKSLQERGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPSVLEF 253
           LVL+D+L ++ +HS FF SLQ RG+ L F+LADD  L L +YG+YLY  L++FAPS   F
Sbjct: 36  LVLVDDLAVRSSHSAFFASLQGRGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRF 95



 Score = 57.2 bits (132), Expect = 7e-09
 Identities = 32/70 (45%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
 Frame = +1

Query: 247 RVCGQVDSEAITKFIDDXXXXXXXXXXXXXDVYREIASECGFEMDEE-SAAVIDHFNYDV 423
           R  G VD  +I +FID              D+ R IA+ECG + DE+  A VIDH NY  
Sbjct: 94  RFGGSVDQNSILEFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHINYAA 153

Query: 424 TD-EGDHTRI 450
           TD EGDHT I
Sbjct: 154 TDAEGDHTLI 163


>04_03_0052 +
           10257109-10257337,10257580-10257668,10257708-10258289,
           10258477-10258668,10259392-10259563,10260190-10260461,
           10260682-10260801,10260912-10260968,10261631-10261831,
           10262451-10262511,10262712-10263013
          Length = 758

 Score = 32.7 bits (71), Expect = 0.17
 Identities = 20/74 (27%), Positives = 31/74 (41%)
 Frame = -1

Query: 392 ADSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPQTRARKERIL*DSC 213
           AD S+++N  + A+     P           P S+  + +     P T+ R  R++  SC
Sbjct: 524 ADRSNVNNSDATALHTQERPVHTPETTNEIDPKSV--ITSEKENRPPTKQRLRRLIIRSC 581

Query: 212 INILRILTGPDLHH 171
            NIL  L     HH
Sbjct: 582 NNILSWLKNHHRHH 595


>02_05_1052 +
           33770355-33773981,33774217-33774336,33774880-33774996,
           33775322-33775411,33775971-33776078,33776304-33776351
          Length = 1369

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 23/72 (31%), Positives = 37/72 (51%)
 Frame = -1

Query: 446 RVWSPSSVTS*LKWSMTAADSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASL 267
           R+ +P+S +S    S  ++ SSS S P  +A++  +  A    A  R PP  +   M SL
Sbjct: 102 RISAPTSPSS--APSSPSSSSSSSSTPVRDAVAAESQSAPRRLAGGRAPPDGLWPSMRSL 159

Query: 266 STCPQTRARKER 231
           S+  Q  A+ +R
Sbjct: 160 SSSLQLEAKGKR 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,165,196
Number of Sequences: 37544
Number of extensions: 234926
Number of successful extensions: 683
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)