Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0734
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.8  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.7  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 388 VGCASVCDRSAPGSRWPGPATCRMPLSSHL 299
           V    V   +  G R PGPA  R  L +HL
Sbjct: 316 VAAVQVPQLAGGGRRGPGPARSRRHLPAHL 345


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 241 NHERADSLRQEAETLKNAIR 300
           N ++  +LRQE ETLK+ ++
Sbjct: 342 NQDKIVALRQEQETLKSQVQ 361


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +3

Query: 336 PGHLEPGADRSHTDAHPTNLARSSREDLRHA 428
           P H  P +D+ H   H T +  ++  D   A
Sbjct: 32  PRHFNPPSDKLHHPIHQTVIYHNNPRDPNRA 62


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 657 SSRNRRSCLRASSAINRADVVQSTA 583
           SS+N RS    +SA N +   QST+
Sbjct: 337 SSKNYRSATGGNSASNSSGDAQSTS 361


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +3

Query: 348 EPGADRSHTDAHPTNLARSSREDLRHALG 434
           +P  D SH   H T+L         H LG
Sbjct: 126 QPPTDNSHVHHHQTSLLGKVEGAATHHLG 154


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 469 PDWPTPSSWNHCP 431
           P WP+P   +H P
Sbjct: 275 PQWPSPIGASHLP 287


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 448 NLVSASQDGKLIVWDSHTT 504
           + V+ + D  +I+W SH T
Sbjct: 424 DFVARNSDTPIILWTSHLT 442


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,408
Number of Sequences: 336
Number of extensions: 3004
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)