Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0734
(701 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 32 0.020
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 27 0.57
DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domai... 26 1.3
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 26 1.3
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 25 1.7
AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. 25 1.7
AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant r... 25 3.0
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 24 5.3
DQ370044-1|ABD18605.1| 99|Anopheles gambiae putative salivary ... 23 7.0
AY994094-1|AAX86007.1| 41|Anopheles gambiae metallothionein 2 ... 23 7.0
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 9.3
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 31.9 bits (69), Expect = 0.020
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 376 MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 489
+RT LRGH + + + W + L S G + VW
Sbjct: 54 LRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVW 91
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
cell-adhesion protein protein.
Length = 1881
Score = 27.1 bits (57), Expect = 0.57
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -3
Query: 504 GRVAVPHDQLTVLTGRHQVPGITAPVHGVDLREMTAQGSSGAHLYATD 361
GR + ++ VL P + PV+ +D+ E G+ L ATD
Sbjct: 493 GRTSTAQIRVVVLDQNDNFPEFSQPVYDIDVPENVIAGTVLLQLQATD 540
>DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 168
Score = 25.8 bits (54), Expect = 1.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 395 CAVISRRSTPCTGAVIPGTWCRP 463
CA ++ PCT I G +C+P
Sbjct: 52 CADLNELQKPCTKQCIQGCFCKP 74
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 25.8 bits (54), Expect = 1.3
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 659 AARGTGAVAFARLQL*IEQMLSSPPQAT*EARGRVGAGHHPG*AQRDR 516
AA +V + + + Q P+A EA GR+ G PG A+R R
Sbjct: 287 AAAANVSVEVIKEAIRVRQQELRGPEAVREAAGRLRTGPVPGAAERHR 334
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 25.4 bits (53), Expect = 1.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 238 INHERADSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPI 363
IN+E + R+E++ + A++DA A D S +N E +
Sbjct: 1027 INNEAHKTTREESQRIYKAVKDAVVFALDLSQFGMLTNQEGV 1068
>AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein.
Length = 506
Score = 25.4 bits (53), Expect = 1.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 654 SRNRRSCLRASSAINRADVVQSTASDVG 571
S + R CL S +NR +VV+ T +G
Sbjct: 345 SNSERFCLGLLSNVNRNEVVEQTRRHIG 372
>AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant
receptor Or4 protein.
Length = 397
Score = 24.6 bits (51), Expect = 3.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 401 VISRRSTPCTGAVIPGTWCRPVRTVS*SCGTATRPTGARDP 523
+I++ T C GAV W P+ ++ C R T + +P
Sbjct: 126 IIAKVQTTCMGAVTLFYWIAPIPSI---CAHYYRSTNSTEP 163
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 415 IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNRCT 516
I+ + W S S++LVS + D WD +T + T
Sbjct: 15 IFGVFWASLSKSLVSQAPDE--CRWDGYTEDDLT 46
>DQ370044-1|ABD18605.1| 99|Anopheles gambiae putative salivary
secreted peptide withTIL domain protein.
Length = 99
Score = 23.4 bits (48), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 425 CTGAVIPGTWCRP 463
CTG + G +CRP
Sbjct: 52 CTGVCVSGCFCRP 64
>AY994094-1|AAX86007.1| 41|Anopheles gambiae metallothionein 2
protein.
Length = 41
Score = 23.4 bits (48), Expect = 7.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 164 CVACCTCAAPGC 199
CVA C C +P C
Sbjct: 6 CVADCKCTSPNC 17
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.0 bits (47), Expect = 9.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 128 RRSKGHC*QKDRCVACCTCAA 190
RRS HC Q+ R +C AA
Sbjct: 38 RRSSAHCTQQTRQASCSDNAA 58
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,310
Number of Sequences: 2352
Number of extensions: 14698
Number of successful extensions: 56
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -