Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0731
(565 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 33 0.12
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 33 0.12
07_03_1201 + 24791588-24792619 29 3.4
08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821 28 4.5
03_06_0672 + 35443883-35444051,35444151-35444482 28 4.5
03_02_0859 - 11853928-11854138,11854225-11854683,11854760-118549... 28 4.5
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 28 4.5
02_01_0462 + 3332464-3332470,3333606-3335806 28 4.5
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 28 4.5
11_01_0461 + 3569700-3572373,3572477-3572847 28 5.9
11_01_0456 + 3522599-3523921,3524005-3524027,3524097-3525265,352... 28 5.9
04_04_1373 + 33025059-33025422,33025510-33025551,33025836-330260... 28 5.9
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 28 5.9
01_06_0705 + 31342236-31342415,31343086-31343391,31343555-313437... 28 5.9
09_01_0087 + 1245890-1246565,1247409-1247484,1247774-1247893,124... 27 7.8
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 33.5 bits (73), Expect = 0.12
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 LTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVAR 169
+T P P T + + R + IYP ++ L S SR+M I +H +V+
Sbjct: 378 ITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSN 437
Query: 170 GVQKILQDYKSLQDIIAILGMDELSEED 253
+ K +Q + A++G + LS ED
Sbjct: 438 QLYANYAIGKDVQAMKAVVGEEALSSED 465
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 33.5 bits (73), Expect = 0.12
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 LTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVAR 169
+T P P T + + R + IYP ++ L S SR+M I +H +V+
Sbjct: 348 ITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSN 407
Query: 170 GVQKILQDYKSLQDIIAILGMDELSEED 253
+ K +Q + A++G + LS ED
Sbjct: 408 QLYANYAIGKDVQAMKAVVGEEALSSED 435
>07_03_1201 + 24791588-24792619
Length = 343
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 274 RKIQRFLSQPFQVAEVFTGHAGKLVPL--EETIKGFS---KILAGDYDHLPEVAFYMVG 435
R + RF+ +PF AE G +V L E +K + AG Y +P AF+ G
Sbjct: 251 RAMARFMGRPFSAAEEAAGAVASVVELCSFERMKALEVNRRGTAGSYKSMPRDAFFRKG 309
>08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821
Length = 716
Score = 28.3 bits (60), Expect = 4.5
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 LTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPL--DSTSRIMDPNIIGAEHYNVARGV 175
L + A T LDA+ L +A I + PL D S + PN GAE N+AR +
Sbjct: 514 LLESAEDTALDILDASDELGLFLARAVIDDVLAPLNLDEISGKLPPNCSGAETLNMARSL 573
>03_06_0672 + 35443883-35444051,35444151-35444482
Length = 166
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 161 VARGVQKILQDYKSLQDIIAILGMDELSEED 253
VA GVQ++++ KSL I A+ +E EE+
Sbjct: 84 VATGVQRLIKGIKSLSQIFAMYDDEEEDEEE 114
>03_02_0859 -
11853928-11854138,11854225-11854683,11854760-11854991,
11855064-11855187,11855276-11855960,11856429-11856735,
11856832-11858188
Length = 1124
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 158 NVARGVQKILQDYKSLQDIIAILGMDELSEEDS*QWHV 271
+V R +K L Y SL ++G+ ELS+E+ +W +
Sbjct: 604 DVVRATEKHLHAYSSLGLRTLVIGVRELSQEEFQEWQM 641
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 335 ACPVNTSATWKGCERNL*ILR 273
A P NTS TWKG E L +L+
Sbjct: 440 AFPSNTSPTWKGIEHGLELLK 460
>02_01_0462 + 3332464-3332470,3333606-3335806
Length = 735
Score = 28.3 bits (60), Expect = 4.5
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = -1
Query: 310 LGKVVRGTSEFYVHVPLSTVFFRQLVHTQNSNNVLQGFVVLKNFLNSTCNIVVLSSNNIG 131
L ++V ++ +P S +QL NN + G + L+ F N T ++ SNN+
Sbjct: 252 LEELVLSSNRLVGSLPPSFARMQQLSFFAIDNNYINGSIPLEMFSNCTQLMIFDVSNNM- 310
Query: 130 VHDTGS*VKRIHSWVDTQF 74
TGS I +W Q+
Sbjct: 311 --LTGSIPSLISNWTHLQY 327
>01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +3
Query: 66 PLLNWVSTQLWI-----LLTQLPVSWTPILLELSTTMLHVEFRKFFRTTN 200
P W+S ++I ++ V+W ++L + ML++ FRK++ +T+
Sbjct: 1079 PFFVWMSVSMYITVIGVVIMTCQVAWPSVVLVVPLLMLNLWFRKYYISTS 1128
>11_01_0461 + 3569700-3572373,3572477-3572847
Length = 1014
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -1
Query: 313 LLGKVVRGTSEFYVHVPLSTVFFRQLVHTQNSNNVLQGFVVLKNFLNSTCNIVVLSSNNI 134
LL VV +++FY H+P + L NN L G + + F T + L SN +
Sbjct: 441 LLENVVLDSNQFYGHIPRGLESLKVLQVLSIPNNNLHGSIPRELFSIPTIREIWLYSNRL 500
>11_01_0456 +
3522599-3523921,3524005-3524027,3524097-3525265,
3525373-3525737
Length = 959
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 289 TSEFYVHVPLSTVFFRQLVHTQNSNNVLQGFVVLKNFLNST-CNIVVLSSNNI 134
T+ F +PLS L + SNN LQG + +F NS+ +++L+ N++
Sbjct: 107 TNSFTGEIPLSLGHLHHLQNLYLSNNTLQG--KIPDFTNSSNLKVLLLNGNHL 157
>04_04_1373 +
33025059-33025422,33025510-33025551,33025836-33026054,
33026145-33026384,33026483-33027508,33027770-33028545
Length = 888
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 286 SEFYVHVPLSTVFFRQLVHTQNSNNVLQGFVVLKNFL-NSTCNIVVLSSNNIG 131
+E Y H+P+ RQL + SNN + G V F ++ + +S N +G
Sbjct: 506 NEIYGHIPIELCQIRQLRYLDLSNNSISGEVPACLFTDHAVLESLKVSKNKLG 558
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 367 KGFSKILAGD--YDHLPEVAFYMVGPIEEVVAK 459
KG +++AG + H FYM+ P EEVV K
Sbjct: 163 KGTERLVAGAQLFGHSTRQPFYMIQPSEEVVQK 195
>01_06_0705 + 31342236-31342415,31343086-31343391,31343555-31343796,
31343927-31344122,31344419-31344602,31344984-31345147,
31345454-31345981,31346530-31346630,31347619-31347634,
31347834-31347941,31348028-31348078,31349059-31349100,
31349442-31349541,31350039-31350256,31350367-31350807,
31350916-31351043,31351131-31351992
Length = 1288
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 450 NLLNRSNHVECYFWQMIIVPC*NFGESFDSFLKWY*FTRMSSEHL 316
N +NR NH++ +FW + ++ NF ++ + WY + S H+
Sbjct: 1240 NNINR-NHLDLFFWLLAVLSFLNF-LNYLFWASWYKYKPQQSAHV 1282
>09_01_0087 +
1245890-1246565,1247409-1247484,1247774-1247893,
1248927-1249002,1250767-1250835,1251019-1251099,
1251298-1251369,1251600-1251692,1251904-1252083,
1252558-1252641,1252729-1252872,1253089-1253178,
1255982-1256064,1256140-1256421,1256722-1256959,
1258307-1258957
Length = 1004
Score = 27.5 bits (58), Expect = 7.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 210 TLLLFWVWTSCLKK 251
+LLLFW W CLK+
Sbjct: 277 SLLLFWYWEDCLKQ 290
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,613,691
Number of Sequences: 37544
Number of extensions: 305252
Number of successful extensions: 900
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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