Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0729
         (731 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7FT94 Cluster: Glycosyl hydrolase, family 18; n=5; Clo...    37   0.59 
UniRef50_Q2LS10 Cluster: Hypothetical membrane protein; n=1; Syn...    36   0.77 
UniRef50_UPI00006A1D97 Cluster: UPI00006A1D97 related cluster; n...    34   4.1  
UniRef50_Q74YJ4 Cluster: Putative uncharacterized protein; n=2; ...    33   7.2  

>UniRef50_A7FT94 Cluster: Glycosyl hydrolase, family 18; n=5;
           Clostridium|Rep: Glycosyl hydrolase, family 18 -
           Clostridium botulinum (strain ATCC 19397 / Type A)
          Length = 504

 Score = 36.7 bits (81), Expect = 0.59
 Identities = 20/49 (40%), Positives = 28/49 (57%)
 Frame = +2

Query: 503 STYIQNARKVRRKAHYLILQVPSRR*TEKVSSFPFSPFEYERDGRITGN 649
           S Y++  R+ RRK ++L   +PSR     VS  PF+PF    D RI G+
Sbjct: 308 SLYLEMGREFRRKGYFLSASIPSR-----VSDEPFNPFSDPFDYRIIGS 351


>UniRef50_Q2LS10 Cluster: Hypothetical membrane protein; n=1;
           Syntrophus aciditrophicus SB|Rep: Hypothetical membrane
           protein - Syntrophus aciditrophicus (strain SB)
          Length = 319

 Score = 36.3 bits (80), Expect = 0.77
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = +2

Query: 107 ENYRQNQRLS*RLTTQSLRVVN*NPSIAWRIVGNNMIWLIAWSLWVHGVLPNAPRCSRNS 286
           E  +QN+    RLT  ++R++N      W   GN  IW+ A   +     P A  CS+ +
Sbjct: 104 EKKKQNRDFDYRLTGTAIRILNKKEMAQWS-KGNRGIWIEAEVPYTPKTFP-ADDCSQPT 161

Query: 287 MESHRSSFIDLPL 325
           +E H    +D+ L
Sbjct: 162 LERHSGEMLDVRL 174


>UniRef50_UPI00006A1D97 Cluster: UPI00006A1D97 related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A1D97 UniRef100 entry -
           Xenopus tropicalis
          Length = 820

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
 Frame = +2

Query: 308 FIDLPLLFTCIYRRNAAGYNFGLVCAS------VFL*ECY 409
           FI  P  FTC++R+ AA   FG++C+S      +FL +CY
Sbjct: 760 FIGQPHRFTCLFRQMAAVEVFGIICSSAGILVCIFLPKCY 799


>UniRef50_Q74YJ4 Cluster: Putative uncharacterized protein; n=2;
           Yersinia pestis|Rep: Putative uncharacterized protein -
           Yersinia pestis
          Length = 89

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +1

Query: 352 RCRIQFWPRVCECISLRVLLTKFDTHFSFSQATRSSASQFYNLLYVPGKTVHLYSKC 522
           RC      R+C      V +  +  H   S +TRS   ++Y LLY  G  +HLY  C
Sbjct: 29  RCHAIHPERICMSNLKGVQIRSYIFHLISSNSTRSKVRKYYYLLYQYG--IHLYQIC 83


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,184,602
Number of Sequences: 1657284
Number of extensions: 14896123
Number of successful extensions: 33246
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33239
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)