Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0727
(788 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 58 6e-09
01_06_0663 - 30991390-30992340 48 1e-05
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 46 3e-05
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 42 7e-04
05_07_0134 - 27911920-27912762 42 7e-04
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 32 0.45
02_04_0045 - 19205992-19206318 31 1.4
02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,758... 29 3.2
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 24 3.8
09_02_0024 + 3084891-3086165 29 4.2
07_03_1086 + 23858419-23859423,23859527-23859610 29 4.2
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 29 5.6
10_08_0426 - 17817975-17818582,17819068-17819209,17819648-178197... 29 5.6
07_01_0408 - 3137705-3138017,3139361-3139371,3140693-3140770,314... 29 5.6
04_04_1662 - 35149985-35150290,35150548-35150929,35150953-351510... 29 5.6
01_07_0345 + 42877363-42878367 29 5.6
12_01_0849 + 7948693-7948996,7949829-7950610 28 7.4
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 28 7.4
04_03_0708 + 18888085-18889337,18889583-18889661,18890458-18890781 28 7.4
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 28 9.7
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 58.4 bits (135), Expect = 6e-09
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +2
Query: 512 FMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIK 691
FM GG +E + + PLL MG K +CG G+G VAK+ NNM M I+ + +E +G
Sbjct: 132 FMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISMLGVSEAFALGQN 191
Query: 692 MGLE 703
+G++
Sbjct: 192 LGIK 195
Score = 38.3 bits (85), Expect = 0.007
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 12/83 (14%)
Frame = +3
Query: 297 SILTSNKVVLDVYLGKDGVVAHAK-KGS-LLIDSSTIDPNVPKQ----IFPIALEKGLGF 458
++L S+ VLDVY G++G++A+ G L IDSST+DP ++ I L++ +
Sbjct: 48 TMLPSSAHVLDVYNGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAY 107
Query: 459 T------DAPVSGGVMGAQNATL 509
DAPVSGGV A+ L
Sbjct: 108 AEKPMMLDAPVSGGVPAAEAGKL 130
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 694 GTRTEVLLDVLNNSSARSWSTEVTVQFPGLV 786
G + VL D+ N SSAR WS++ PG++
Sbjct: 193 GIKASVLTDIFNCSSARCWSSDTYNPVPGVM 223
>01_06_0663 - 30991390-30992340
Length = 316
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +3
Query: 348 GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATL 509
G +A G LL+D +T DP + +I A K DAPVSGG GA++ATL
Sbjct: 99 GALAGLAPGGLLVDMTTSDPTLAAEIAEAAAAKSCAAVDAPVSGGDRGARSATL 152
Score = 35.1 bits (77), Expect = 0.064
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +2
Query: 509 AFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGI 688
+ AGG R PL K+MG + G G+GQ AKL N + + T + E M
Sbjct: 153 SIFAGGDAAVVARLAPLFKLMG-NALYMGGPGAGQRAKLGNQIAIASTMVGLVEGMVYAH 211
Query: 689 KMGLE 703
K GL+
Sbjct: 212 KAGLD 216
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2
Query: 515 MAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKM 694
+A G K ++ +P V+G K F G+IG+G KL NM+MG A +E +++
Sbjct: 135 LAAGDKVLYDDMVPAFDVLGKKSFFLGEIGNGAKMKLVVNMIMGSMMNALSEGLSLADNS 194
Query: 695 GLEPK 709
GL P+
Sbjct: 195 GLSPQ 199
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 121 VAFLGLGNMGGFMAANLVKKGFTV 192
V FLGLG MG MAANL++ GF V
Sbjct: 3 VGFLGLGIMGKAMAANLLRHGFRV 26
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Frame = +1
Query: 61 STQCLYTAARRA----YSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDAL 222
++Q +Y A++ A + T K + F+GLG MG MA++L+K GF+V YD K L
Sbjct: 302 ASQQIYDASKLADQLVMACKTAKTIGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTL 359
Score = 35.1 bits (77), Expect = 0.064
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 300 ILTSNKVVLD-VYLGKDGVVAHAKKGSLLIDSSTIDPN-VPKQIFPIALE-KGLGFTDAP 470
I+ +N+V + V G G V+ G+ +I SST+ P V K + E + + DAP
Sbjct: 385 IMVANEVQAENVLYGNAGAVSVMAAGTSIILSSTVSPGFVIKLKERLEAECRDIKLVDAP 444
Query: 471 VSGGVMGAQNATL 509
VSGGV A TL
Sbjct: 445 VSGGVKRAAEGTL 457
>05_07_0134 - 27911920-27912762
Length = 280
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +3
Query: 318 VVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQ 497
VVLD GV+A + G +L+D ++ P++ +++ A G D+PVSGG +GA+
Sbjct: 59 VVLDA---ASGVLAGLRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGAR 115
Query: 498 NATL 509
+ L
Sbjct: 116 DGAL 119
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 581 QFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEP 706
+F G +G G KL NM+MG ++ +E + + K+GL+P
Sbjct: 209 RFFLGDVGKGADMKLVVNMVMGSMMVSFSEGLLLSEKVGLDP 250
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +1
Query: 46 ARTILSTQCLYTAARRAYSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKD--- 216
AR + S C +++ + V FLGLG MG MA+NL+ G V ++ ++
Sbjct: 30 ARLVFS--CSASSSSPSGEGGFSGKVGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCD 87
Query: 217 -ALNAAAKNGVTPA 255
L+ AK +PA
Sbjct: 88 PLLSLGAKYEPSPA 101
>02_04_0045 - 19205992-19206318
Length = 108
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 205 PSKDALNAAAKNGVTPATPLLQPLMESTWSFP 300
P K A AAA G P PL L +S W P
Sbjct: 43 PEKKAAAAAAAGGRRPLAPLATELQDSPWDLP 74
>02_02_0184 -
7581345-7581769,7581880-7582296,7582891-7583661,
7583894-7584437,7584794-7584961,7585019-7585101,
7585190-7585631
Length = 949
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 157 MAANLVKKGFTVRGYDPSKDALN 225
+A L+K+G RGYD SKD+ N
Sbjct: 251 VARRLLKQGLPFRGYDESKDSYN 273
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 23.8 bits (49), Expect(2) = 3.8
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 341 QRWRCGSCEKRIA 379
++WRC C KR A
Sbjct: 122 KKWRCDKCSKRYA 134
Score = 23.8 bits (49), Expect(2) = 3.8
Identities = 20/87 (22%), Positives = 32/87 (36%)
Frame = +2
Query: 410 CSQTDLPYSPRERAGIHRCTCIWRSHGCSERYPAFMAGGRKEDFERSLPLLKVMGAKQFH 589
C + Y+ + H TC R + C R++ F + +
Sbjct: 126 CDKCSKRYAVQSDWKAHSKTCGTREYRCD----CGTLFSRRDSFITHRAFCDALAQENAR 181
Query: 590 CGQIGSGQVAKLTNNMLMGITGMATAE 670
IG+G V NM +G+TGMA +
Sbjct: 182 MPPIGAG-VYGGAGNMTLGLTGMAAPQ 207
>09_02_0024 + 3084891-3086165
Length = 424
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 720 RAEQLIGSLLVDRGDCPVPR 779
R L+G +L DRGD PVPR
Sbjct: 69 RRPPLVGFILTDRGDKPVPR 88
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 344 RWRCGSCEKRIASDRFEYNRSECSQTDLPYSPRERAGIHR 463
R R SC SEC DL ++P AGIHR
Sbjct: 10 RRRSTSCYSDSGDSSCSEPFSECGSDDLSFTPAAAAGIHR 49
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 491 THDSSRYRCICESQPFL*GYREDLFGNIRIYC 396
+H +S Y + E L +DL GNIR+YC
Sbjct: 370 SHAASGYHKVLEENRKLYNQIQDLRGNIRVYC 401
>10_08_0426 - 17817975-17818582,17819068-17819209,17819648-17819745,
17820070-17821897,17822331-17822738,17822891-17822943,
17823461-17823877,17824401-17824605
Length = 1252
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 192 NCETLFNQVRSHEPSHVSEAEESHILVG 109
N + + N V SH PSH SE E+ +L G
Sbjct: 1072 NSDKISNDVGSHSPSH-SERNEARVLTG 1098
>07_01_0408 -
3137705-3138017,3139361-3139371,3140693-3140770,
3141105-3141206,3141309-3141380,3141484-3141558
Length = 216
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 190 VRGYDPSKDALNAAAKNGVTPATPLLQPLMESTWSFPY*PAIKSCSTCT--WAKMAL 354
+RG P A+ AAA TPA + T SFP A +S +T T WA AL
Sbjct: 44 IRGATPFSSAVAAAAAAASTPARS--SSALTQTLSFPI-QATRSAATSTPPWASSAL 97
>04_04_1662 -
35149985-35150290,35150548-35150929,35150953-35151055,
35151186-35151252
Length = 285
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -1
Query: 407 RIYC-TRIDQKRSFFRMSHNAIFAQVHVEHDFIAGQYGNDHVDSINGCSN-GVAGVTPFL 234
R+ C R+ Q+R +R + I A + D A GND + C N VAG F
Sbjct: 117 RVCCWRRLLQRRRRYRRGKDDIDAAAAGKDDIDAAATGNDEFATAAACFNAAVAGKDEFD 176
Query: 233 AAA 225
AAA
Sbjct: 177 AAA 179
>01_07_0345 + 42877363-42878367
Length = 334
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = +2
Query: 353 CGSCEKRIASDRFEYNRSECSQTDLPYSPRERAGIHRCTCIWRSHGCSERYPAFMAGGRK 532
C C R+ +D + + +Q S + + T IWR G F A G
Sbjct: 168 CPVCRHRMPTDDHDSTNAAAAQAAAGSSDEDATTVGTLT-IWRLPGGGYAVGRFAAAGGT 226
Query: 533 EDFERSLPLL 562
ER LP+L
Sbjct: 227 RAGERELPVL 236
>12_01_0849 + 7948693-7948996,7949829-7950610
Length = 361
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 339 PGTRRARLYCWSIWKRPRRLHQRLQQWSCWRH-SVLGR 229
P RR L C W RP +H R QQW +RH SV GR
Sbjct: 151 PPLRRPALCC--PW-RPLEVHPRRQQWR-YRHCSVFGR 184
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 121 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVT 249
+A +G GN G F+A ++G T+ + S D + AA G +
Sbjct: 704 IAIVGFGNFGQFLARTFARQGHTLLAHSRS-DYSSLAASVGAS 745
>04_03_0708 + 18888085-18889337,18889583-18889661,18890458-18890781
Length = 551
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 104 LTPTRMWLSSASETWEGSWLRTW 172
L P RMWL+S W+G TW
Sbjct: 523 LRPQRMWLASTVSGWDGLPRPTW 545
>04_04_0179 -
23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 527 DLRP*RQGSVLSTHDSSRYRCICESQPFL*GYREDLFGNIRIYC 396
DLR R S H+ + Y + E L +DL G+IR+YC
Sbjct: 347 DLR--RLESYFEAHNHNAYHKLLEENRKLYNQVQDLKGSIRVYC 388
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,437,625
Number of Sequences: 37544
Number of extensions: 616274
Number of successful extensions: 1878
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1875
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -