Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0727
         (788 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-8|CAB03798.1|  299|Caenorhabditis elegans Hypothetical pr...    64   1e-10
AL031630-23|CAA21003.1|  299|Caenorhabditis elegans Hypothetical...    64   1e-10
Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical pr...    33   0.31 
Z22178-1|CAA80153.1|  298|Caenorhabditis elegans Hypothetical pr...    32   0.54 
Z99281-40|CAB16512.1|  268|Caenorhabditis elegans Hypothetical p...    31   0.94 
AC024859-26|AAK29977.2|  300|Caenorhabditis elegans Hypothetical...    29   5.0  

>Z81453-8|CAB03798.1|  299|Caenorhabditis elegans Hypothetical
           protein B0250.5 protein.
          Length = 299

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +2

Query: 488 GCSERYPAFMAG-GRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMAT 664
           G  +    FM G G    F+R+  +L +MG    + G +G+G  AK+ NNML+GI  +A 
Sbjct: 127 GAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAV 186

Query: 665 AECMNMGIKMGLEPK 709
           AE MN+GI MGL+ K
Sbjct: 187 AETMNLGISMGLDAK 201



 Score = 54.8 bits (126), Expect = 7e-08
 Identities = 30/71 (42%), Positives = 42/71 (59%)
 Frame = +3

Query: 297 SILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVS 476
           ++L S+  V  VY G+ G+    + G+L +DSSTID  V  ++   A      + DAP+S
Sbjct: 63  TVLPSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPIS 122

Query: 477 GGVMGAQNATL 509
           GGV GAQ ATL
Sbjct: 123 GGVTGAQQATL 133



 Score = 38.7 bits (86), Expect = 0.005
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = +1

Query: 127 FLGLGNMGGFMAANLVKKGFTVRGYDPSK 213
           F+GLGNMGG MA NL+K G  +  YD +K
Sbjct: 6   FIGLGNMGGHMARNLIKNGKKLIVYDVNK 34


>AL031630-23|CAA21003.1|  299|Caenorhabditis elegans Hypothetical
           protein B0250.5 protein.
          Length = 299

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +2

Query: 488 GCSERYPAFMAG-GRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMAT 664
           G  +    FM G G    F+R+  +L +MG    + G +G+G  AK+ NNML+GI  +A 
Sbjct: 127 GAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAV 186

Query: 665 AECMNMGIKMGLEPK 709
           AE MN+GI MGL+ K
Sbjct: 187 AETMNLGISMGLDAK 201



 Score = 54.8 bits (126), Expect = 7e-08
 Identities = 30/71 (42%), Positives = 42/71 (59%)
 Frame = +3

Query: 297 SILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVS 476
           ++L S+  V  VY G+ G+    + G+L +DSSTID  V  ++   A      + DAP+S
Sbjct: 63  TVLPSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPIS 122

Query: 477 GGVMGAQNATL 509
           GGV GAQ ATL
Sbjct: 123 GGVTGAQQATL 133



 Score = 38.7 bits (86), Expect = 0.005
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = +1

Query: 127 FLGLGNMGGFMAANLVKKGFTVRGYDPSK 213
           F+GLGNMGG MA NL+K G  +  YD +K
Sbjct: 6   FIGLGNMGGHMARNLIKNGKKLIVYDVNK 34


>Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical
           protein C31C9.2 protein.
          Length = 322

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +1

Query: 115 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKN 240
           + +A LGLG +G  +A  L   G  V G+DP      A AKN
Sbjct: 146 RTLAVLGLGRIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKN 187


>Z22178-1|CAA80153.1|  298|Caenorhabditis elegans Hypothetical
           protein F54C8.1 protein.
          Length = 298

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +1

Query: 115 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAK 237
           +NVA +G G MG  +A      GF V   D +K AL+ A K
Sbjct: 12  RNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMK 52


>Z99281-40|CAB16512.1|  268|Caenorhabditis elegans Hypothetical
           protein Y57G11C.11a protein.
          Length = 268

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 136 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPATPL 264
           +G+ GG ++  L + GF V G D +K A+ AA  N    A PL
Sbjct: 82  VGSGGGLLSIPLARSGFDVTGIDATKQAVEAA--NQSLTAKPL 122


>AC024859-26|AAK29977.2|  300|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.2 protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 645 PINMLLVSLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPP 520
           P N LL+  A+     CP+ NC   ITL   RD   +++R P
Sbjct: 103 PCNCLLICKASSTRIACPRNNCRRVITLAGQRD-PGTAIRAP 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,279,695
Number of Sequences: 27780
Number of extensions: 466519
Number of successful extensions: 1256
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)