Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0726
         (436 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0147 + 17690840-17691687,17692328-17692532,17693048-176931...    31   0.31 
03_05_0875 - 28434894-28435082,28435173-28435247,28435399-284354...    29   1.6  
04_01_0625 - 8222105-8222462,8222574-8222926,8223029-8223204,822...    29   2.2  
04_01_0624 - 8202783-8203140,8203242-8203594,8203697-8203872,820...    28   2.9  
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053...    27   6.6  
09_02_0327 - 7284829-7284889,7284946-7286126                           27   8.7  
04_04_1171 - 31455136-31455482,31455805-31458982                       27   8.7  

>03_04_0147 +
           17690840-17691687,17692328-17692532,17693048-17693199,
           17693306-17693597,17693807-17693962,17694561-17694764,
           17694875-17694987,17695078-17695192,17695293-17695382,
           17695463-17695666,17695764-17695859,17696094-17696216,
           17696308-17696400,17696477-17696641,17697179-17697268,
           17697356-17697520
          Length = 1036

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = +3

Query: 99  VRNASSGMLRNLSAVKLDICDSLMDQ 176
           +++ASSGM  NLSAV L +C+  +D+
Sbjct: 355 LKSASSGMFVNLSAVMLRLCEPFLDR 380


>03_05_0875 -
           28434894-28435082,28435173-28435247,28435399-28435490,
           28435721-28435835,28436019-28436188,28436237-28436310,
           28436397-28436553,28436658-28436730,28436898-28436960,
           28437067-28437341,28437710-28437816,28437884-28438788,
           28439742-28440032
          Length = 861

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 219 LHVHENSRSTVS*YPDPSENHKYPA*QQIDFEAYQMM--HFSQN*PGSSNKGAA 64
           L++H N   T     +PS+ H YPA  + D  A++ +  + S+  PGS N   A
Sbjct: 107 LNIHVNELHTSQLARNPSQEHDYPA--KSDHAAHEAIVEYHSRRSPGSRNHNEA 158


>04_01_0625 -
           8222105-8222462,8222574-8222926,8223029-8223204,
           8223318-8223555,8226983-8227423
          Length = 521

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 180 IMTPLTCYFHEHAESWIPDPISKSRMKILIHLFNVLICC*ICV 308
           ++TPL   F + AES+   P+ K  M     LF  LI C I +
Sbjct: 281 LLTPLRWIFSKFAESYYSIPMKKYGMVPDHSLFEALITCLIAI 323


>04_01_0624 -
           8202783-8203140,8203242-8203594,8203697-8203872,
           8203993-8204230,8208308-8208748
          Length = 521

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 180 IMTPLTCYFHEHAESWIPDPISKSRMKILIHLFNVLICC*ICV 308
           ++TPL   F + AES+   P+ K  M     LF  LI C + +
Sbjct: 281 LLTPLRWIFSKFAESYYSIPMKKYDMVPDHSLFEALITCLVAI 323


>02_05_1074 -
           33904518-33904697,33904886-33904985,33905085-33905311,
           33905511-33908384,33908467-33908643,33908786-33909008,
           33909727-33909806,33910657-33910817,33910892-33910937,
           33911129-33911251,33911730-33911804,33911920-33912120
          Length = 1488

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = +3

Query: 84  ILASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPLTCYFHEHAESWIPDPISKSRMKI 263
           +L S +R+     LR  S + L IC + +D D    L      +  + + DP +  R   
Sbjct: 543 LLCSCIRSVKKPELRRASLILLKICSTYIDDDSRLQLVI---PYVIAMLSDPAAIVRCAA 599

Query: 264 LIHLFNVL 287
           L  L +VL
Sbjct: 600 LETLSDVL 607


>09_02_0327 - 7284829-7284889,7284946-7286126
          Length = 413

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 20/78 (25%), Positives = 37/78 (47%)
 Frame = +3

Query: 120 MLRNLSAVKLDICDSLMDQDIMTPLTCYFHEHAESWIPDPISKSRMKILIHLFNVLICC* 299
           +L  + +  LD+ + L+   +  P +   H H  ++I D + K RM++ + +   L    
Sbjct: 234 LLSGMVSYVLDLQEHLLITALKNPRSVRKHRH--NYIFD-LKKGRMRVRMKVALALTVVA 290

Query: 300 ICVKVLTXXXNMLVNLGY 353
           ICV V       + NLG+
Sbjct: 291 ICVGVGAAVLKRVENLGW 308


>04_04_1171 - 31455136-31455482,31455805-31458982
          Length = 1174

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 145  LTADRFRSIPDDAFLTELARIQQ*RSSNFYKTLVY 41
            L  ++F S  D  FLTELA + + R  N  + + Y
Sbjct: 901  LNLEQFPSKSDKCFLTELATLSRLRHKNLARVVGY 935


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,891,639
Number of Sequences: 37544
Number of extensions: 177735
Number of successful extensions: 364
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)