Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0726
         (436 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058346-1|AAL13575.1|  625|Drosophila melanogaster GH12023p pro...    40   0.001
AE014297-451|AAF54129.1|  625|Drosophila melanogaster CG10286-PA...    40   0.001

>AY058346-1|AAL13575.1|  625|Drosophila melanogaster GH12023p
           protein.
          Length = 625

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = +3

Query: 93  SSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 194
           S++RNA++G  RNLS    ++CD L++ DI+T L
Sbjct: 88  SAIRNAAAGAFRNLSVFGTEVCDFLVENDILTAL 121



 Score = 36.7 bits (81), Expect = 0.014
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +2

Query: 266 DTFVQCVNLLLNLCESSDLXXKYVGQSRILDILPRYLDMAXFGID 400
           DTF Q ++LL NLCESS    + + Q+  L  L    D   FG++
Sbjct: 142 DTFQQAIHLLRNLCESSPTATEALNQANFLSSLLLGFDYRKFGLE 186


>AE014297-451|AAF54129.1|  625|Drosophila melanogaster CG10286-PA
           protein.
          Length = 625

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = +3

Query: 93  SSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 194
           S++RNA++G  RNLS    ++CD L++ DI+T L
Sbjct: 88  SAIRNAAAGAFRNLSVFGTEVCDFLVENDILTAL 121



 Score = 36.7 bits (81), Expect = 0.014
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +2

Query: 266 DTFVQCVNLLLNLCESSDLXXKYVGQSRILDILPRYLDMAXFGID 400
           DTF Q ++LL NLCESS    + + Q+  L  L    D   FG++
Sbjct: 142 DTFQQAIHLLRNLCESSPTATEALNQANFLSSLLLGFDYRKFGLE 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,001,580
Number of Sequences: 53049
Number of extensions: 324112
Number of successful extensions: 737
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)