Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0726
         (436 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95559-7|CAB76730.2|  329|Caenorhabditis elegans Hypothetical pr...    27   5.9  
AF106579-8|AAC78201.1|  710|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z95559-7|CAB76730.2|  329|Caenorhabditis elegans Hypothetical
           protein Y41E3.14 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 186 TPLTCYFHEHAESWIPDPISK 248
           TP+ C F+  A +WIP+P+S+
Sbjct: 168 TPIIC-FNSKALAWIPEPLSE 187


>AF106579-8|AAC78201.1|  710|Caenorhabditis elegans Hypothetical
           protein F54E2.5 protein.
          Length = 710

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 275 VQCVNLLLNLCESSDLXXKYVGQSRILDILPRYLDMAXFGI 397
           + C NLL+N+  +  L  K   QS I   +   +D   + I
Sbjct: 454 ISCANLLINVPATLSLISKDSVQSEIFSFISHLIDFCHYSI 494


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,804,115
Number of Sequences: 27780
Number of extensions: 167950
Number of successful extensions: 319
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)