Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0723
(670 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK000340-1|BAA91095.1| 706|Homo sapiens protein ( Homo sapiens ... 34 0.40
BC054517-1|AAH54517.1| 375|Homo sapiens Fanconi anemia, complem... 34 0.53
BC009042-1|AAH09042.1| 375|Homo sapiens Fanconi anemia, complem... 34 0.53
BC000973-1|AAH00973.2| 706|Homo sapiens KIAA1333 protein. 34 0.53
AK001197-1|BAA91548.1| 375|Homo sapiens protein ( Homo sapiens ... 34 0.53
AC007250-1|AAY15020.1| 375|Homo sapiens unknown protein. 34 0.53
AB037754-1|BAA92571.1| 741|Homo sapiens KIAA1333 protein protein. 34 0.53
BC117686-1|AAI17687.1| 1683|Homo sapiens SHPRH protein protein. 33 0.70
AY163808-1|AAO06907.1| 1659|Homo sapiens helicase-like protein p... 33 0.70
AY161136-1|AAO26201.1| 1683|Homo sapiens SNF2 histone linker PHD... 33 0.70
AL451145-1|CAH70765.1| 1683|Homo sapiens SNF2 histone linker PHD... 33 0.70
AL356599-2|CAI41120.1| 1683|Homo sapiens SNF2 histone linker PHD... 33 0.70
AB095943-1|BAC23119.1| 1092|Homo sapiens KIAA2023 protein protein. 33 0.70
BC028986-1|AAH28986.1| 458|Homo sapiens UBXD7 protein protein. 30 6.5
AB018337-1|BAA34514.1| 490|Homo sapiens KIAA0794 protein protein. 30 6.5
AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens ... 30 8.6
>AK000340-1|BAA91095.1| 706|Homo sapiens protein ( Homo sapiens
cDNA FLJ20333 fis, clone HEP11252. ).
Length = 706
Score = 34.3 bits (75), Expect = 0.40
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 253 KDSQVCSICL-CVE-LPDVQGVPQPLCSNLSCGAYFHRTCLHMVYINFDYLSFYFPNCVL 426
++S C+ICL +E +P + P C N A+FHR CL + IN +F+F C +
Sbjct: 139 RESLPCTICLEFIEPIPSYNILRSPCCKN----AWFHRDCLQVQAINAG--AFFF-RCTI 191
Query: 427 C 429
C
Sbjct: 192 C 192
>BC054517-1|AAH54517.1| 375|Homo sapiens Fanconi anemia,
complementation group L protein.
Length = 375
Score = 33.9 bits (74), Expect = 0.53
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 268 CSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLH 372
C IC +L +P +C N CG FH+ CL+
Sbjct: 307 CGICYAYQLDGT--IPDQVCDNSQCGQPFHQICLY 339
>BC009042-1|AAH09042.1| 375|Homo sapiens Fanconi anemia,
complementation group L protein.
Length = 375
Score = 33.9 bits (74), Expect = 0.53
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 268 CSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLH 372
C IC +L +P +C N CG FH+ CL+
Sbjct: 307 CGICYAYQLDGT--IPDQVCDNSQCGQPFHQICLY 339
>BC000973-1|AAH00973.2| 706|Homo sapiens KIAA1333 protein.
Length = 706
Score = 33.9 bits (74), Expect = 0.53
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 253 KDSQVCSICL-CVE-LPDVQGVPQPLCSNLSCGAYFHRTCLHMVYINFDYLSFYFPNCVL 426
++S C+ICL +E +P + P C N A+FHR CL + IN +F C +
Sbjct: 139 RESLPCTICLEFIEPIPSYNILRSPCCKN----AWFHRDCLQVQAIN---AGVFFFRCTI 191
Query: 427 C 429
C
Sbjct: 192 C 192
>AK001197-1|BAA91548.1| 375|Homo sapiens protein ( Homo sapiens
cDNA FLJ10335 fis, clone NT2RM2000669. ).
Length = 375
Score = 33.9 bits (74), Expect = 0.53
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 268 CSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLH 372
C IC +L +P +C N CG FH+ CL+
Sbjct: 307 CGICYAYQLDGT--IPDQVCDNSQCGQPFHQICLY 339
>AC007250-1|AAY15020.1| 375|Homo sapiens unknown protein.
Length = 375
Score = 33.9 bits (74), Expect = 0.53
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 268 CSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLH 372
C IC +L +P +C N CG FH+ CL+
Sbjct: 307 CGICYAYQLDGT--IPDQVCDNSQCGQPFHQICLY 339
>AB037754-1|BAA92571.1| 741|Homo sapiens KIAA1333 protein protein.
Length = 741
Score = 33.9 bits (74), Expect = 0.53
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 253 KDSQVCSICL-CVE-LPDVQGVPQPLCSNLSCGAYFHRTCLHMVYINFDYLSFYFPNCVL 426
++S C+ICL +E +P + P C N A+FHR CL + IN +F C +
Sbjct: 174 RESLPCTICLEFIEPIPSYNILRSPCCKN----AWFHRDCLQVQAIN---AGVFFFRCTI 226
Query: 427 C 429
C
Sbjct: 227 C 227
>BC117686-1|AAI17687.1| 1683|Homo sapiens SHPRH protein protein.
Length = 1683
Score = 33.5 bits (73), Expect = 0.70
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 277 CLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMVYINFDYLSFYFPNCVLCI 432
C+C EL + P+ C L C + H C++ N FY P+C++ +
Sbjct: 661 CICGELDQIDRKPRVQC--LKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAM 710
>AY163808-1|AAO06907.1| 1659|Homo sapiens helicase-like protein
protein.
Length = 1659
Score = 33.5 bits (73), Expect = 0.70
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 277 CLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMVYINFDYLSFYFPNCVLCI 432
C+C EL + P+ C L C + H C++ N FY P+C++ +
Sbjct: 661 CICGELDQIDRKPRVQC--LKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAM 710
>AY161136-1|AAO26201.1| 1683|Homo sapiens SNF2 histone linker PHD
RING helicase protein.
Length = 1683
Score = 33.5 bits (73), Expect = 0.70
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 277 CLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMVYINFDYLSFYFPNCVLCI 432
C+C EL + P+ C L C + H C++ N FY P+C++ +
Sbjct: 661 CICGELDQIDRKPRVQC--LKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAM 710
>AL451145-1|CAH70765.1| 1683|Homo sapiens SNF2 histone linker PHD
RING helicase protein.
Length = 1683
Score = 33.5 bits (73), Expect = 0.70
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 277 CLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMVYINFDYLSFYFPNCVLCI 432
C+C EL + P+ C L C + H C++ N FY P+C++ +
Sbjct: 661 CICGELDQIDRKPRVQC--LKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAM 710
>AL356599-2|CAI41120.1| 1683|Homo sapiens SNF2 histone linker PHD
RING helicase protein.
Length = 1683
Score = 33.5 bits (73), Expect = 0.70
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 277 CLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMVYINFDYLSFYFPNCVLCI 432
C+C EL + P+ C L C + H C++ N FY P+C++ +
Sbjct: 661 CICGELDQIDRKPRVQC--LKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAM 710
>AB095943-1|BAC23119.1| 1092|Homo sapiens KIAA2023 protein protein.
Length = 1092
Score = 33.5 bits (73), Expect = 0.70
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 277 CLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMVYINFDYLSFYFPNCVLCI 432
C+C EL + P+ C L C + H C++ N FY P+C++ +
Sbjct: 246 CICGELDQIDRKPRVQC--LKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAM 295
>BC028986-1|AAH28986.1| 458|Homo sapiens UBXD7 protein protein.
Length = 458
Score = 30.3 bits (65), Expect = 6.5
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = -3
Query: 350 YAPQDKLLHKG-WGTP*TSGNSTHKQML---QTCESFHCQCLYSDFFHIEEILQYQRFVK 183
+ P L+HKG + T G +K ++ Q + F CQCL D + E + R +
Sbjct: 111 FRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIR--E 168
Query: 182 YFLLY-LYHD 156
+F+ + +YHD
Sbjct: 169 HFIFWQVYHD 178
>AB018337-1|BAA34514.1| 490|Homo sapiens KIAA0794 protein protein.
Length = 490
Score = 30.3 bits (65), Expect = 6.5
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = -3
Query: 350 YAPQDKLLHKG-WGTP*TSGNSTHKQML---QTCESFHCQCLYSDFFHIEEILQYQRFVK 183
+ P L+HKG + T G +K ++ Q + F CQCL D + E + R +
Sbjct: 143 FRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIR--E 200
Query: 182 YFLLY-LYHD 156
+F+ + +YHD
Sbjct: 201 HFIFWQVYHD 210
>AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45488 fis, clone BRTHA2003759. ).
Length = 130
Score = 29.9 bits (64), Expect = 8.6
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 293 YLMFKVCPSLYAAIYLVEHIFTGPAYIWFILILIIYHSIFLIVYCVLVNF*FVETLMN 466
Y+ + LY +Y+ +IFT YI+ L + IY IF+ + L F +V +N
Sbjct: 48 YIFIYIYICLYIYLYIYLYIFT---YIYIYLHIFIYLHIFIYICICLYIFIYVFIYIN 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,246,802
Number of Sequences: 237096
Number of extensions: 1894819
Number of successful extensions: 7321
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7320
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -