Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0718
(506 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 89 6e-18
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 89 6e-18
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 89 6e-18
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 89 6e-18
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 89 6e-18
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 89 6e-18
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 89 6e-18
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 89 6e-18
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 89 6e-18
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 89 6e-18
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 89 6e-18
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 89 6e-18
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 87 3e-17
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 87 3e-17
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 87 3e-17
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 87 3e-17
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 87 3e-17
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 87 3e-17
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 87 3e-17
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 87 3e-17
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 87 3e-17
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 87 3e-17
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 87 3e-17
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 87 3e-17
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 87 3e-17
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 87 3e-17
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 87 3e-17
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 87 3e-17
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 87 3e-17
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 87 3e-17
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 87 3e-17
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 87 3e-17
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 87 3e-17
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 82 9e-16
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 82 9e-16
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 70 4e-12
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 70 4e-12
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 66 7e-11
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 66 7e-11
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 65 1e-10
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 65 1e-10
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 64 3e-10
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 64 3e-10
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 64 3e-10
BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein. 64 3e-10
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 64 3e-10
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 64 3e-10
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 64 3e-10
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 64 3e-10
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 64 3e-10
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 64 3e-10
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 64 3e-10
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 64 3e-10
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 64 3e-10
U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein. 64 4e-10
M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2 ... 64 4e-10
M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein. 64 4e-10
D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein. 64 4e-10
D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein. 64 4e-10
BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein. 64 4e-10
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 62 8e-10
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 62 8e-10
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 62 1e-09
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 62 1e-09
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 62 1e-09
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 62 1e-09
U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous ribonucleop... 56 7e-08
CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein. 56 7e-08
BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear r... 56 7e-08
BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear r... 56 7e-08
BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear r... 56 7e-08
BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear r... 56 7e-08
BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear r... 56 7e-08
BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear r... 56 7e-08
BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear r... 56 7e-08
BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear r... 56 7e-08
BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear r... 56 7e-08
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 54 2e-07
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 54 2e-07
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 54 2e-07
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 54 2e-07
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 54 2e-07
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 54 2e-07
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 54 2e-07
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 54 2e-07
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 54 2e-07
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 53 5e-07
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 53 5e-07
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 53 5e-07
X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRN... 53 7e-07
S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein. 52 2e-06
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 50 6e-06
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 50 6e-06
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 50 6e-06
AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA seq... 48 1e-05
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 48 2e-05
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 48 2e-05
AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein. 48 2e-05
L26405-1|AAA58677.1| 359|Homo sapiens huc protein. 48 2e-05
AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein. 48 2e-05
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 46 8e-05
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 45 1e-04
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 45 2e-04
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 45 2e-04
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 45 2e-04
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 45 2e-04
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 45 2e-04
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 45 2e-04
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 45 2e-04
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 45 2e-04
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 45 2e-04
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 45 2e-04
BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein. 44 3e-04
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 42 0.002
BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein. 41 0.002
BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA bindi... 41 0.002
AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like f... 41 0.002
AB209067-1|BAD92304.1| 421|Homo sapiens bruno-like 5, RNA bindi... 41 0.002
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 40 0.004
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 40 0.004
BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein. 40 0.004
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 40 0.004
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 40 0.004
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 40 0.004
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 40 0.004
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 40 0.004
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 40 0.005
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 40 0.005
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 40 0.005
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 40 0.005
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 40 0.005
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 40 0.005
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 40 0.005
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 40 0.005
AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein BRU... 40 0.005
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 39 0.012
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 39 0.012
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 39 0.012
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 39 0.012
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 39 0.012
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 39 0.012
AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein... 39 0.012
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 39 0.012
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 39 0.012
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 39 0.012
AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein... 39 0.012
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 39 0.012
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 39 0.012
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 39 0.012
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 39 0.012
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 39 0.012
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 39 0.012
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 39 0.012
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 38 0.015
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 38 0.015
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 38 0.015
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 38 0.015
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 38 0.015
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 38 0.015
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 38 0.015
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 38 0.015
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 38 0.015
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 38 0.015
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 38 0.015
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 38 0.020
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 38 0.020
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 38 0.020
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 38 0.020
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 38 0.020
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 38 0.020
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 38 0.027
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 38 0.027
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 38 0.027
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 38 0.027
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 38 0.027
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 38 0.027
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 37 0.046
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 37 0.046
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 37 0.046
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 37 0.046
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 37 0.046
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 37 0.046
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 37 0.046
AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b, sub... 36 0.061
AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b, sub... 36 0.061
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 36 0.061
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 36 0.081
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 36 0.081
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 36 0.081
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 36 0.081
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 36 0.081
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 36 0.081
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 36 0.081
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 36 0.081
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 36 0.081
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 36 0.081
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 36 0.081
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 36 0.081
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 36 0.11
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 36 0.11
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 36 0.11
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 36 0.11
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 36 0.11
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 36 0.11
AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor... 36 0.11
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 36 0.11
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 36 0.11
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 35 0.14
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 35 0.14
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 35 0.19
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 35 0.19
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 35 0.19
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 35 0.19
AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein pro... 35 0.19
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 35 0.19
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 35 0.19
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 34 0.33
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 34 0.33
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 34 0.33
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 34 0.33
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 34 0.33
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 34 0.33
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 34 0.33
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 34 0.33
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 34 0.33
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 34 0.33
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 34 0.33
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 34 0.33
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 34 0.33
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 34 0.33
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 34 0.33
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 34 0.33
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 34 0.33
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 34 0.33
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 34 0.33
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 34 0.33
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 34 0.33
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 34 0.33
U77476-1|AAB84361.1| 295|Homo sapiens DAZLA protein protein. 33 0.43
AL136097-15|CAI16208.1| 227|Homo sapiens nucleolar protein 8 pr... 33 0.43
AL136097-14|CAI16209.1| 205|Homo sapiens nucleolar protein 8 pr... 33 0.43
AL136097-13|CAC12712.1| 427|Homo sapiens nucleolar protein 8 pr... 33 0.43
AK001049-1|BAA91479.1| 427|Homo sapiens protein ( Homo sapiens ... 33 0.43
AF141345-1|AAG49448.1| 213|Homo sapiens LYST-interacting protei... 33 0.43
AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein. 33 0.43
AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8 pro... 33 0.43
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 33 0.57
U66726-1|AAB39935.1| 295|Homo sapiens germline specific RNA bin... 33 0.57
U66078-1|AAB63596.1| 295|Homo sapiens DAZLA protein. 33 0.57
U65918-1|AAC50813.1| 295|Homo sapiens RNA binding protein protein. 33 0.57
EF055888-1|ABK58591.1| 80|Homo sapiens DAZL protein. 33 0.57
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 33 0.57
BC027595-1|AAH27595.1| 295|Homo sapiens deleted in azoospermia-... 33 0.57
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 33 0.57
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 33 0.57
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 33 0.57
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 33 0.57
AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens ... 33 0.57
AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens ... 33 0.57
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 33 0.57
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 33 0.57
BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating prote... 33 0.76
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 33 0.76
AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein iso... 33 0.76
AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding pro... 33 0.76
AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein. 33 0.76
X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein. 32 1.0
D50912-1|BAA09471.1| 1010|Homo sapiens KIAA0122 protein. 32 1.0
BX538213-1|CAD98072.1| 729|Homo sapiens hypothetical protein pr... 32 1.0
BX537969-1|CAD97933.1| 995|Homo sapiens hypothetical protein pr... 32 1.0
BC117150-1|AAI17151.1| 729|Homo sapiens cytoplasmic polyadenyla... 32 1.0
BC036899-1|AAH36899.1| 322|Homo sapiens CPEB4 protein protein. 32 1.0
BC024153-1|AAH24153.1| 930|Homo sapiens RNA binding motif prote... 32 1.0
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 32 1.0
BC008733-1|AAH08733.1| 930|Homo sapiens RNA binding motif prote... 32 1.0
BC004181-1|AAH04181.1| 930|Homo sapiens RNA binding motif prote... 32 1.0
BC003089-1|AAH03089.1| 852|Homo sapiens RNA binding motif prote... 32 1.0
BC000681-1|AAH00681.1| 541|Homo sapiens RBM10 protein protein. 32 1.0
AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. 32 1.0
AL513366-5|CAI41701.1| 930|Homo sapiens RNA binding motif prote... 32 1.0
AL513366-4|CAI41700.1| 853|Homo sapiens RNA binding motif prote... 32 1.0
AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA seq... 32 1.0
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 32 1.0
AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens ... 32 1.0
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 32 1.0
AB051460-1|BAB21764.1| 712|Homo sapiens KIAA1673 protein protein. 32 1.0
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 32 1.3
BC105925-1|AAI05926.1| 562|Homo sapiens CPEB2 protein protein. 32 1.3
BC103942-1|AAI03943.1| 575|Homo sapiens CPEB2 protein protein. 32 1.3
BC103941-1|AAI03942.1| 568|Homo sapiens CPEB2 protein protein. 32 1.3
BC103940-1|AAI03941.1| 589|Homo sapiens cytoplasmic polyadenyla... 32 1.3
BC103939-1|AAI03940.2| 548|Homo sapiens CPEB2 protein protein. 32 1.3
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 32 1.3
BC036444-1|AAH36444.1| 697|Homo sapiens cytoplasmic polyadenyla... 32 1.3
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 32 1.3
AY255519-1|AAP41553.1| 559|Homo sapiens cytoplasmic polyadenyla... 32 1.3
AY247744-1|AAP37585.1| 589|Homo sapiens cytoplasmic polyadenyla... 32 1.3
AL365398-3|CAI14105.1| 684|Homo sapiens cytoplasmic polyadenyla... 32 1.3
AL365398-2|CAI14104.1| 698|Homo sapiens cytoplasmic polyadenyla... 32 1.3
AL158040-5|CAI13637.1| 684|Homo sapiens cytoplasmic polyadenyla... 32 1.3
AL158040-4|CAI13636.1| 698|Homo sapiens cytoplasmic polyadenyla... 32 1.3
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 32 1.3
AB023157-1|BAA76784.2| 699|Homo sapiens KIAA0940 protein protein. 32 1.3
U72355-1|AAC00056.1| 915|Homo sapiens Hsp27 ERE-TATA-binding pr... 31 1.7
U38449-1|AAB49814.1| 33|Homo sapiens RBM protein. 31 1.7
L43631-1|AAC18697.1| 864|Homo sapiens scaffold attachment facto... 31 1.7
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 31 1.7
BC126219-1|AAI26220.1| 917|Homo sapiens scaffold attachment fac... 31 1.7
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 31 1.7
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 31 1.7
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 31 1.7
AB208780-1|BAD92017.1| 772|Homo sapiens scaffold attachment fac... 31 1.7
X75314-1|CAA53063.1| 229|Homo sapiens SEB4D protein. 31 2.3
U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein. 31 2.3
U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein p... 31 2.3
CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein. 31 2.3
BX322635-2|CAI42531.1| 693|Homo sapiens TSPY-like 2 protein. 31 2.3
BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating p... 31 2.3
BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating prote... 31 2.3
BC024270-1|AAH24270.1| 693|Homo sapiens TSPY-like 2 protein. 31 2.3
BC018711-1|AAH18711.1| 216|Homo sapiens RBM38 protein protein. 31 2.3
BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating prote... 31 2.3
BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif prote... 31 2.3
BC001566-1|AAH01566.1| 338|Homo sapiens TSPYL2 protein protein. 31 2.3
AY040871-1|AAK72407.1| 693|Homo sapiens cell division autoantig... 31 2.3
AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating p... 31 2.3
AK130003-1|BAC85272.1| 307|Homo sapiens protein ( Homo sapiens ... 31 2.3
AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens ... 31 2.3
AF432218-1|AAL99924.1| 216|Homo sapiens CLL-associated antigen ... 31 2.3
AF273046-1|AAG34906.1| 693|Homo sapiens CTCL tumor antigen se20... 31 2.3
AB209182-1|BAD92419.1| 334|Homo sapiens TSPY-like 2 variant pro... 31 2.3
AB015345-1|BAA34802.1| 486|Homo sapiens HRIHFB2216 protein. 31 2.3
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 31 3.1
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 31 3.1
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 31 3.1
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 31 3.1
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 31 3.1
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 31 3.1
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 31 3.1
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 31 3.1
AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding pro... 31 3.1
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 31 3.1
X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1) ribonucleopro... 30 4.0
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 30 4.0
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 30 4.0
X06815-1|CAA29964.1| 216|Homo sapiens hU1-70K-like protein (216... 30 4.0
X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for ... 30 4.0
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 30 4.0
U13897-1|AAA50599.1| 904|Homo sapiens homolog of Drosophila dis... 30 4.0
M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen... 30 4.0
M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen... 30 4.0
M57935-1|AAA36571.1| 166|Homo sapiens ribonucleoprotein antigen... 30 4.0
M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small ... 30 4.0
BC100928-1|AAI00929.1| 333|Homo sapiens DEPDC4 protein protein. 30 4.0
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 30 4.0
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 30 4.0
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 30 4.0
BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear ribonucle... 30 4.0
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 30 4.0
AF254794-1|AAG53596.1| 633|Homo sapiens differentially expresse... 30 4.0
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 30 5.3
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 30 5.3
U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein. 30 5.3
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 30 5.3
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 30 5.3
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 30 5.3
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 30 5.3
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 30 5.3
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 30 5.3
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 30 5.3
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 30 5.3
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 30 5.3
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 30 5.3
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 30 5.3
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 30 5.3
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 30 5.3
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 30 5.3
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 30 5.3
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 30 5.3
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 30 5.3
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 30 5.3
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 30 5.3
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 30 5.3
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 30 5.3
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 30 5.3
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 30 5.3
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 30 5.3
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 29 7.1
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 29 7.1
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 29 7.1
BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein. 29 7.1
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 29 7.1
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 29 7.1
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 29 7.1
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 29 7.1
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 29 7.1
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 29 7.1
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 29 7.1
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 29 7.1
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 29 7.1
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 29 7.1
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 29 7.1
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 29 7.1
AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma apoptosis... 29 7.1
AF186379-1|AAD56250.1| 798|Homo sapiens ligand effect modulator... 29 7.1
AF159714-1|AAD51615.1| 798|Homo sapiens PPAR gamma coactivator-... 29 7.1
AF108205-1|AAF19083.1| 798|Homo sapiens PPAR gamma coactivator-... 29 7.1
AF106698-1|AAF18573.1| 798|Homo sapiens PPAR gamma coactivator-... 29 7.1
AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA b... 29 7.1
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 29 7.1
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 29 7.1
AC092834-1|AAY41058.1| 798|Homo sapiens unknown protein. 29 7.1
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 29 7.1
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 29 7.1
U37766-1|AAB49819.1| 36|Homo sapiens RNA binding protein protein. 29 9.3
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 29 9.3
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 29 9.3
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 29 9.3
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 29 9.3
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 29 9.3
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 29 9.3
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 29 9.3
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 29 9.3
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 29 9.3
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 29 9.3
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 29 9.3
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 29 9.3
AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein. 29 9.3
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 29 9.3
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 29 9.3
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 29 9.3
AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2 pro... 29 9.3
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 29 9.3
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 29 9.3
>D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA binding
factor protein.
Length = 271
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 30 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 89
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 90 GLSPDTSEEQIKEYFGAFGEI 110
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 47 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 106
Query: 248 YGE 256
+GE
Sbjct: 107 FGE 109
Score = 34.7 bits (76), Expect = 0.19
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 185 LFVGGLSWETTXKELRDHFGAYGE 256
+F+GGLSW+T+ K+L ++ +GE
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGE 24
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 60 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 119
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 120 GLSPDTSEEQIKEYFGAFGEI 140
Score = 41.1 bits (92), Expect = 0.002
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ DD K+F+GGLSW+T+ K+L ++ +GE
Sbjct: 25 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGE 54
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 77 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 136
Query: 248 YGE 256
+GE
Sbjct: 137 FGE 139
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E K++ K + GK+F+GGLS + S ++ + S FG +++
Sbjct: 11 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 57
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEI 259
Score = 41.1 bits (92), Expect = 0.002
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ DD K+F+GGLSW+T+ K+L ++ +GE
Sbjct: 144 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGE 173
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 196 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 255
Query: 248 YGE 256
+GE
Sbjct: 256 FGE 258
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E K++ K + GK+F+GGLS + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEI 259
Score = 41.1 bits (92), Expect = 0.002
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ DD K+F+GGLSW+T+ K+L ++ +GE
Sbjct: 144 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGE 173
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 196 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 255
Query: 248 YGE 256
+GE
Sbjct: 256 FGE 258
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E K++ K + GK+F+GGLS + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEI 259
Score = 41.1 bits (92), Expect = 0.002
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ DD K+F+GGLSW+T+ K+L ++ +GE
Sbjct: 144 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGE 173
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 196 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 255
Query: 248 YGE 256
+GE
Sbjct: 256 FGE 258
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E K++ K + GK+F+GGLS + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein.
Length = 415
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 174 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 233
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 234 GLSPDTSEEQIKEYFGAFGEI 254
Score = 41.1 bits (92), Expect = 0.002
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ DD K+F+GGLSW+T+ K+L ++ +GE
Sbjct: 139 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGE 168
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 191 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 250
Query: 248 YGE 256
+GE
Sbjct: 251 FGE 253
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E K++ K + GK+F+GGLS + S ++ + S FG +++
Sbjct: 125 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 171
>AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor
protein.
Length = 298
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 57 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 116
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 117 GLSPDTSEEQIKEYFGAFGEI 137
Score = 41.1 bits (92), Expect = 0.002
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ DD K+F+GGLSW+T+ K+L ++ +GE
Sbjct: 22 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGE 51
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 74 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 133
Query: 248 YGE 256
+GE
Sbjct: 134 FGE 136
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E K++ K + GK+F+GGLS + S ++ + S FG +++
Sbjct: 8 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 54
>AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEI 259
Score = 41.1 bits (92), Expect = 0.002
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ DD K+F+GGLSW+T+ K+L ++ +GE
Sbjct: 144 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGE 173
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 196 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 255
Query: 248 YGE 256
+GE
Sbjct: 256 FGE 258
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E K++ K + GK+F+GGLS + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein.
Length = 244
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 60 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 119
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 120 GLSPDTSEEQIKEYFGAFGEI 140
Score = 41.1 bits (92), Expect = 0.002
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ DD K+F+GGLSW+T+ K+L ++ +GE
Sbjct: 25 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGE 54
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 77 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 136
Query: 248 YGE 256
+GE
Sbjct: 137 FGE 139
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E K++ K + GK+F+GGLS + S ++ + S FG +++
Sbjct: 11 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 57
>AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEI 259
Score = 41.1 bits (92), Expect = 0.002
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ DD K+F+GGLSW+T+ K+L ++ +GE
Sbjct: 144 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGE 173
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 196 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 255
Query: 248 YGE 256
+GE
Sbjct: 256 FGE 258
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E K++ K + GK+F+GGLS + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein.
Length = 301
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 60 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 119
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 120 GLSPDTSEEQIKEYFGAFGEI 140
Score = 41.1 bits (92), Expect = 0.002
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ DD K+F+GGLSW+T+ K+L ++ +GE
Sbjct: 25 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGE 54
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 77 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 136
Query: 248 YGE 256
+GE
Sbjct: 137 FGE 139
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E K++ K + GK+F+GGLS + S ++ + S FG +++
Sbjct: 11 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 57
>AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 89.4 bits (212), Expect = 6e-18
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 435
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + S+++I+ +F FG I
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEI 259
Score = 41.1 bits (92), Expect = 0.002
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ DD K+F+GGLSW+T+ K+L ++ +GE
Sbjct: 144 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGE 173
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + D L G D A+A G++ +K+FVGGLS +T+ ++++++FGA
Sbjct: 196 FKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 255
Query: 248 YGE 256
+GE
Sbjct: 256 FGE 258
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E K++ K + GK+F+GGLS + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 107 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 166
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 167 GLSPDTPEEKIREYFGGFGEV 187
Score = 50.4 bits (115), Expect = 4e-06
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +2
Query: 113 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
A G +S+ + +D+ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 54 APKGSAESEGAKIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGE 101
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 187 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 239
Score = 40.3 bits (90), Expect = 0.004
Identities = 14/40 (35%), Positives = 29/40 (72%)
Frame = +1
Query: 385 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+D K + GK+F+GGLS + + +++++FS+FG +++
Sbjct: 65 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVD 104
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 124 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 183
Query: 248 YGE 256
+GE
Sbjct: 184 FGE 186
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 107 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 166
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 167 GLSPDTPEEKIREYFGGFGEV 187
Score = 50.0 bits (114), Expect = 5e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 116 ENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ G +S +S A + ++ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 55 DEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGE 101
Score = 39.5 bits (88), Expect = 0.007
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RG FI FK E + K+M H + K + K A ++
Sbjct: 187 VESIELPMDNKTNKRRGLCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 239
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 124 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 183
Query: 248 YGE 256
+GE
Sbjct: 184 FGE 186
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A+ K+F+GGLS + + +++++FS+FG +++
Sbjct: 71 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 104
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 188 GLSPDTPEEKIREYFGGFGEV 208
Score = 50.0 bits (114), Expect = 5e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 116 ENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ G +S +S A + ++ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 76 DEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGE 122
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 145 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 248 YGE 256
+GE
Sbjct: 205 FGE 207
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A+ K+F+GGLS + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 37 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 96
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 97 GLSPDTPEEKIREYFGGFGEV 117
Score = 44.0 bits (99), Expect = 3e-04
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
++ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 4 EEWKMFIGGLSWDTTKKDLKDYFSKFGE 31
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 117 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 169
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 54 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 113
Query: 248 YGE 256
+GE
Sbjct: 114 FGE 116
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A+ K+F+GGLS + + +++++FS+FG +++
Sbjct: 1 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 34
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 188 GLSPDTPEEKIREYFGGFGEV 208
Score = 50.0 bits (114), Expect = 5e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 116 ENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ G +S +S A + ++ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 76 DEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGE 122
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 145 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 248 YGE 256
+GE
Sbjct: 205 FGE 207
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A+ K+F+GGLS + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 40 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 99
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 100 GLSPDTPEEKIREYFGGFGEV 120
Score = 46.8 bits (106), Expect = 4e-05
Identities = 16/29 (55%), Positives = 25/29 (86%)
Frame = +2
Query: 170 DDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+D+ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 6 EDEGKMFIGGLSWDTTKKDLKDYFSKFGE 34
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 120 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 172
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 57 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 116
Query: 248 YGE 256
+GE
Sbjct: 117 FGE 119
Score = 35.1 bits (77), Expect = 0.14
Identities = 12/35 (34%), Positives = 26/35 (74%)
Frame = +1
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K + GK+F+GGLS + + +++++FS+FG +++
Sbjct: 3 KNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVD 37
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 188 GLSPDTPEEKIREYFGGFGEV 208
Score = 50.0 bits (114), Expect = 5e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 116 ENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ G +S +S A + ++ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 76 DEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGE 122
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 145 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 248 YGE 256
+GE
Sbjct: 205 FGE 207
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A+ K+F+GGLS + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 188 GLSPDTPEEKIREYFGGFGEV 208
Score = 50.0 bits (114), Expect = 5e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 116 ENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ G +S +S A + ++ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 76 DEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGE 122
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 145 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 248 YGE 256
+GE
Sbjct: 205 FGE 207
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A+ K+F+GGLS + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 188 GLSPDTPEEKIREYFGGFGEV 208
Score = 50.0 bits (114), Expect = 5e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 116 ENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ G +S +S A + ++ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 76 DEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGE 122
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 145 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 248 YGE 256
+GE
Sbjct: 205 FGE 207
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A+ K+F+GGLS + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 120 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 179
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 180 GLSPDTPEEKIREYFGGFGEV 200
Score = 50.0 bits (114), Expect = 5e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 116 ENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ G +S +S A + ++ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 68 DEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGE 114
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 200 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 252
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 137 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 196
Query: 248 YGE 256
+GE
Sbjct: 197 FGE 199
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A+ K+F+GGLS + + +++++FS+FG +++
Sbjct: 84 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 117
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 109 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 168
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 169 GLSPDTPEEKIREYFGGFGEV 189
Score = 54.0 bits (124), Expect = 3e-07
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 104 NGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+G E G +S+ + +D+ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 53 SGGTEGGSAESEGAKIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGE 103
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 189 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 241
Score = 40.3 bits (90), Expect = 0.004
Identities = 14/40 (35%), Positives = 29/40 (72%)
Frame = +1
Query: 385 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+D K + GK+F+GGLS + + +++++FS+FG +++
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVD 106
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 126 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 185
Query: 248 YGE 256
+GE
Sbjct: 186 FGE 188
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 188 GLSPDTPEEKIREYFGGFGEV 208
Score = 50.0 bits (114), Expect = 5e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 116 ENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ G +S +S A + ++ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 76 DEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGE 122
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 145 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 248 YGE 256
+GE
Sbjct: 205 FGE 207
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A+ K+F+GGLS + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 188 GLSPDTPEEKIREYFGGFGEV 208
Score = 50.0 bits (114), Expect = 5e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 116 ENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ G +S +S A + ++ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 76 DEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGE 122
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 145 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 248 YGE 256
+GE
Sbjct: 205 FGE 207
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A+ K+F+GGLS + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 435
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 436 GLSSEISDDEIRNFFSEFGTI 498
GLS + +++IR +F FG +
Sbjct: 188 GLSPDTPEEKIREYFGGFGEV 208
Score = 50.0 bits (114), Expect = 5e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 116 ENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ G +S +S A + ++ K+F+GGLSW+TT K+L+D+F +GE
Sbjct: 76 DEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGE 122
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ESI + D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 37.1 bits (82), Expect = 0.035
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 FAQDITTDNQLNGNAENGGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGA 247
F + + D ++ G D A+A ++ +K+FVGGLS +T +++R++FG
Sbjct: 145 FKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 248 YGE 256
+GE
Sbjct: 205 FGE 207
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A+ K+F+GGLS + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 438
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 439 LSSEISDDEIRNFFSEFGTI 498
L+ E ++++IR +F EFG I
Sbjct: 161 LNPEATEEKIREYFGEFGEI 180
Score = 45.2 bits (102), Expect = 1e-04
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 104 NGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+GN GD + + E +D K+FVGGLSW+T+ K+L+D+F +GE
Sbjct: 49 SGNQNGAEGDQINASKNE----EDAGKMFVGGLSWDTSKKDLKDYFTKFGE 95
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I + DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 39.9 bits (89), Expect = 0.005
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 140 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
D A A +D +K+FVGGL+ E T +++R++FG +GE
Sbjct: 141 DPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGE 179
Score = 36.3 bits (80), Expect = 0.061
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +1
Query: 385 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+++ K + GK+FVGGLS + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 438
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 439 LSSEISDDEIRNFFSEFGTI 498
L+ E ++++IR +F EFG I
Sbjct: 161 LNPEATEEKIREYFGEFGEI 180
Score = 45.2 bits (102), Expect = 1e-04
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 104 NGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+GN GD + + E +D K+FVGGLSW+T+ K+L+D+F +GE
Sbjct: 49 SGNQNGAEGDQINASKNE----EDAGKMFVGGLSWDTSKKDLKDYFTKFGE 95
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I + DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 39.9 bits (89), Expect = 0.005
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 140 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
D A A +D +K+FVGGL+ E T +++R++FG +GE
Sbjct: 141 DPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGE 179
Score = 36.3 bits (80), Expect = 0.061
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +1
Query: 385 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+++ K + GK+FVGGLS + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 438
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 439 LSSEISDDEIRNFFSEFGTI 498
L+ E ++++IR +F EFG I
Sbjct: 161 LNPEATEEKIREYFGEFGEI 180
Score = 45.2 bits (102), Expect = 1e-04
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 104 NGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+GN GD + + E +D K+FVGGLSW+T+ K+L+D+F +GE
Sbjct: 49 SGNQNGAEGDQINASKNE----EDAGKMFVGGLSWDTSKKDLKDYFTKFGE 95
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I + DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 39.9 bits (89), Expect = 0.005
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 140 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
D A A +D +K+FVGGL+ E T +++R++FG +GE
Sbjct: 141 DPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGE 179
Score = 36.3 bits (80), Expect = 0.061
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +1
Query: 385 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+++ K + GK+FVGGLS + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 438
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 439 LSSEISDDEIRNFFSEFGTI 498
L+ E ++++IR +F EFG I
Sbjct: 161 LNPEATEEKIREYFGEFGEI 180
Score = 45.2 bits (102), Expect = 1e-04
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 104 NGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+GN GD + + E +D K+FVGGLSW+T+ K+L+D+F +GE
Sbjct: 49 SGNQNGAEGDQINASKNE----EDAGKMFVGGLSWDTSKKDLKDYFTKFGE 95
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I + DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 39.9 bits (89), Expect = 0.005
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 140 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
D A A +D +K+FVGGL+ E T +++R++FG +GE
Sbjct: 141 DPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGE 179
Score = 36.3 bits (80), Expect = 0.061
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +1
Query: 385 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+++ K + GK+FVGGLS + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 438
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 439 LSSEISDDEIRNFFSEFGTI 498
L+ E ++++IR +F EFG I
Sbjct: 161 LNPEATEEKIREYFGEFGEI 180
Score = 45.2 bits (102), Expect = 1e-04
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 104 NGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+GN GD + + E +D K+FVGGLSW+T+ K+L+D+F +GE
Sbjct: 49 SGNQNGAEGDQINASKNE----EDAGKMFVGGLSWDTSKKDLKDYFTKFGE 95
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I + DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 39.9 bits (89), Expect = 0.005
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 140 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
D A A +D +K+FVGGL+ E T +++R++FG +GE
Sbjct: 141 DPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGE 179
Score = 36.3 bits (80), Expect = 0.061
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +1
Query: 385 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+++ K + GK+FVGGLS + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 438
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 439 LSSEISDDEIRNFFSEFGTI 498
L+ E ++++IR +F EFG I
Sbjct: 161 LNPEATEEKIREYFGEFGEI 180
Score = 45.2 bits (102), Expect = 1e-04
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 104 NGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+GN GD + + E +D K+FVGGLSW+T+ K+L+D+F +GE
Sbjct: 49 SGNQNGAEGDQINASKNE----EDAGKMFVGGLSWDTSKKDLKDYFTKFGE 95
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I + DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 39.9 bits (89), Expect = 0.005
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 140 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
D A A +D +K+FVGGL+ E T +++R++FG +GE
Sbjct: 141 DPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGE 179
Score = 36.3 bits (80), Expect = 0.061
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +1
Query: 385 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+++ K + GK+FVGGLS + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 438
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 439 LSSEISDDEIRNFFSEFGTI 498
L+ E ++++IR +F EFG I
Sbjct: 161 LNPEATEEKIREYFGEFGEI 180
Score = 45.2 bits (102), Expect = 1e-04
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 104 NGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+GN GD + + E +D K+FVGGLSW+T+ K+L+D+F +GE
Sbjct: 49 SGNQNGAEGDQINASKNE----EDAGKMFVGGLSWDTSKKDLKDYFTKFGE 95
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I + DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 39.9 bits (89), Expect = 0.005
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 140 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
D A A +D +K+FVGGL+ E T +++R++FG +GE
Sbjct: 141 DPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGE 179
Score = 36.3 bits (80), Expect = 0.061
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +1
Query: 385 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+++ K + GK+FVGGLS + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 82.2 bits (194), Expect = 9e-16
Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 438
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 99 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 158
Query: 439 LSSEI-SDDEIRNFFSEFGTI 498
L+ E ++++IR +F EFG I
Sbjct: 159 LNPESPTEEKIREYFGEFGEI 179
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I + DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 179 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 231
Score = 43.2 bits (97), Expect = 5e-04
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +2
Query: 170 DDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+D K+FVGGLSW+T+ K+L+D+F +GE
Sbjct: 65 EDAGKMFVGGLSWDTSKKDLKDYFTKFGE 93
Score = 39.5 bits (88), Expect = 0.007
Identities = 16/49 (32%), Positives = 32/49 (65%)
Frame = +1
Query: 358 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
AG T +++ K + GK+FVGGLS + S +++++F++FG +++
Sbjct: 48 AGIRTAPRDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 96
Score = 35.9 bits (79), Expect = 0.081
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 140 DHNSAEAPGRDDDRKLFVGGLSWET-TXKELRDHFGAYGE 256
D A A +D +K+FVGGL+ E+ T +++R++FG +GE
Sbjct: 139 DPKKAMAMKKDPVKKIFVGGLNPESPTEEKIREYFGEFGE 178
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 82.2 bits (194), Expect = 9e-16
Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 438
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 99 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 158
Query: 439 LSSEI-SDDEIRNFFSEFGTI 498
L+ E ++++IR +F EFG I
Sbjct: 159 LNPESPTEEKIREYFGEFGEI 179
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I + DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 179 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 231
Score = 43.2 bits (97), Expect = 5e-04
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +2
Query: 170 DDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+D K+FVGGLSW+T+ K+L+D+F +GE
Sbjct: 65 EDAGKMFVGGLSWDTSKKDLKDYFTKFGE 93
Score = 39.5 bits (88), Expect = 0.007
Identities = 16/49 (32%), Positives = 32/49 (65%)
Frame = +1
Query: 358 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
AG T +++ K + GK+FVGGLS + S +++++F++FG +++
Sbjct: 48 AGIRTAPRDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 96
Score = 35.9 bits (79), Expect = 0.081
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 140 DHNSAEAPGRDDDRKLFVGGLSWET-TXKELRDHFGAYGE 256
D A A +D +K+FVGGL+ E+ T +++R++FG +GE
Sbjct: 139 DPKKAMAMKKDPVKKIFVGGLNPESPTEEKIREYFGEFGE 178
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 70.1 bits (164), Expect = 4e-12
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAK 408
I V DP T RSRGF F+ F P S+DKV+ H +++K +DPK K
Sbjct: 47 IRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMV 106
Query: 409 ARHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
R KIFVGGLS+ ++++ +F +FG +
Sbjct: 107 TRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 134 SQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE*RVLM 271
SQ + + + D K+F+GGLSW+T+ LRD+F +GE R M
Sbjct: 6 SQGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECM 51
Score = 44.0 bits (99), Expect = 3e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+E + D T R RGF F+ F+ + ++KV H INNK V+ KKA+ +
Sbjct: 136 VEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 188
Score = 39.5 bits (88), Expect = 0.007
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +1
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
GK+F+GGLS + S D +R++FS+FG I E
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRE 49
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVLM*RQIQTQXDHEG 307
+K+FVGGLS T ++++ +F +G+ M +T H G
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRG 152
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 70.1 bits (164), Expect = 4e-12
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAK 408
I V DP T RSRGF F+ F P S+DKV+ H +++K +DPK K
Sbjct: 43 IRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMV 102
Query: 409 ARHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
R KIFVGGLS+ ++++ +F +FG +
Sbjct: 103 TRTKKIFVGGLSANTVVEDVKQYFEQFGKV 132
Score = 44.0 bits (99), Expect = 3e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+E + D T R RGF F+ F+ + ++KV H INNK V+ KKA+ +
Sbjct: 132 VEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 184
Score = 41.1 bits (92), Expect = 0.002
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYGE*RVLM 271
K+F+GGLSW+T+ LRD+F +GE R M
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECM 47
Score = 37.1 bits (82), Expect = 0.035
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGLS + S D +R++FS+FG I E
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRE 45
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVLM*RQIQTQXDHEG 307
+K+FVGGLS T ++++ +F +G+ M +T H G
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRG 148
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 66.1 bits (154), Expect = 7e-11
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGK 423
V DP T RSRGF F+ F +DKV+A H +++K +DPK K R K
Sbjct: 51 VMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKK 110
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTI 498
IFVGGLS + ++++ +F +FG +
Sbjct: 111 IFVGGLSVNTTVEDVKQYFEQFGKV 135
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 143 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 43.6 bits (98), Expect = 4e-04
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 131 DSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
D+ A D K+F+GGLSW+TT + LR++FG +GE
Sbjct: 4 DAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGE 45
Score = 31.9 bits (69), Expect = 1.3
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGLS + + + +R +F +FG + E
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKE 48
Score = 30.7 bits (66), Expect = 3.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+FVGGLS TT ++++ +F +G+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGK 134
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 66.1 bits (154), Expect = 7e-11
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGK 423
V DP T RSRGF F+ F +DKV+A H +++K +DPK K R K
Sbjct: 51 VMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKK 110
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTI 498
IFVGGLS + ++++ +F +FG +
Sbjct: 111 IFVGGLSVNTTVEDVKQYFEQFGKV 135
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 143 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 43.6 bits (98), Expect = 4e-04
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 131 DSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
D+ A D K+F+GGLSW+TT + LR++FG +GE
Sbjct: 4 DAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGE 45
Score = 31.9 bits (69), Expect = 1.3
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGLS + + + +R +F +FG + E
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKE 48
Score = 30.7 bits (66), Expect = 3.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+FVGGLS TT ++++ +F +G+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGK 134
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 65.3 bits (152), Expect = 1e-10
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F +FG I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQFGKI 131
Score = 48.0 bits (109), Expect = 2e-05
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ +GFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F +G+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQFGKIEVI 134
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 65.3 bits (152), Expect = 1e-10
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F +FG I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQFGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F +G+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQFGKIEVI 134
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 39.1 bits (87), Expect = 0.009
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RKLF+GGLS+ETT + LR HF +G
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWG 38
Score = 37.1 bits (82), Expect = 0.035
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSASPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein.
Length = 267
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for
IMAGE:3615335) protein.
Length = 298
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 23 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 82
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 83 KKIFVGGIKEDTEEHHLRDYFEQYGKI 109
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 109 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 161
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 83 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 112
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 64.1 bits (149), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 NSAEAPGRDDD-RKLFVGGLSWETTXKELRDHFGAYG 253
+ +E+P + RKLF+GGLS+ETT + LR HF +G
Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWG 38
Score = 36.3 bits (80), Expect = 0.061
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein.
Length = 341
Score = 63.7 bits (148), Expect = 4e-10
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 417
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGG+ + + +R++F E+G I
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKI 126
Score = 46.8 bits (106), Expect = 4e-05
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
I++I + TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 126 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 178
Score = 36.7 bits (81), Expect = 0.046
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
++ RKLF+GGLS+ETT + LR+++ +G+
Sbjct: 5 KEQFRKLFIGGLSFETTEESLRNYYEQWGK 34
Score = 35.1 bits (77), Expect = 0.14
Identities = 11/36 (30%), Positives = 26/36 (72%)
Frame = +1
Query: 397 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
++ K + K+F+GGLS E +++ +RN++ ++G + +
Sbjct: 2 EREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 37
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+KLFVGG+ +T LRD+F YG+
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGK 125
>M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2
protein mRNA. ).
Length = 341
Score = 63.7 bits (148), Expect = 4e-10
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 417
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGG+ + + +R++F E+G I
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKI 126
Score = 46.8 bits (106), Expect = 4e-05
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
I++I + TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 126 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 178
Score = 36.7 bits (81), Expect = 0.046
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
++ RKLF+GGLS+ETT + LR+++ +G+
Sbjct: 5 KEQFRKLFIGGLSFETTEESLRNYYEQWGK 34
Score = 35.1 bits (77), Expect = 0.14
Identities = 11/36 (30%), Positives = 26/36 (72%)
Frame = +1
Query: 397 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
++ K + K+F+GGLS E +++ +RN++ ++G + +
Sbjct: 2 EREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 37
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+KLFVGG+ +T LRD+F YG+
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGK 125
>M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein.
Length = 353
Score = 63.7 bits (148), Expect = 4e-10
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 417
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 52 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 111
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGG+ + + +R++F E+G I
Sbjct: 112 KKLFVGGIKEDTEEHHLRDYFEEYGKI 138
Score = 46.8 bits (106), Expect = 4e-05
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
I++I + TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 138 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 190
Score = 37.1 bits (82), Expect = 0.035
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +1
Query: 364 EHTINNKKVDPKKA-KARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E T+ ++ KK K + K+F+GGLS E +++ +RN++ ++G + +
Sbjct: 2 EKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 49
Score = 36.7 bits (81), Expect = 0.046
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
++ RKLF+GGLS+ETT + LR+++ +G+
Sbjct: 17 KEQFRKLFIGGLSFETTEESLRNYYEQWGK 46
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+KLFVGG+ +T LRD+F YG+
Sbjct: 112 KKLFVGGIKEDTEEHHLRDYFEEYGK 137
>D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein.
Length = 341
Score = 63.7 bits (148), Expect = 4e-10
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 417
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGG+ + + +R++F E+G I
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKI 126
Score = 46.8 bits (106), Expect = 4e-05
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
I++I + TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 126 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 178
Score = 36.7 bits (81), Expect = 0.046
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
++ RKLF+GGLS+ETT + LR+++ +G+
Sbjct: 5 KEQFRKLFIGGLSFETTEESLRNYYEQWGK 34
Score = 35.1 bits (77), Expect = 0.14
Identities = 11/36 (30%), Positives = 26/36 (72%)
Frame = +1
Query: 397 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
++ K + K+F+GGLS E +++ +RN++ ++G + +
Sbjct: 2 EREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 37
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+KLFVGG+ +T LRD+F YG+
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGK 125
>D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein.
Length = 353
Score = 63.7 bits (148), Expect = 4e-10
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 417
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 52 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 111
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGG+ + + +R++F E+G I
Sbjct: 112 KKLFVGGIKEDTEEHHLRDYFEEYGKI 138
Score = 46.8 bits (106), Expect = 4e-05
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
I++I + TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 138 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 190
Score = 37.1 bits (82), Expect = 0.035
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +1
Query: 364 EHTINNKKVDPKKA-KARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E T+ ++ KK K + K+F+GGLS E +++ +RN++ ++G + +
Sbjct: 2 EKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 49
Score = 36.7 bits (81), Expect = 0.046
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
++ RKLF+GGLS+ETT + LR+++ +G+
Sbjct: 17 KEQFRKLFIGGLSFETTEESLRNYYEQWGK 46
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+KLFVGG+ +T LRD+F YG+
Sbjct: 112 KKLFVGGIKEDTEEHHLRDYFEEYGK 137
>BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein.
Length = 249
Score = 63.7 bits (148), Expect = 4e-10
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 417
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGG+ + + +R++F E+G I
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKI 126
Score = 46.8 bits (106), Expect = 4e-05
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
I++I + TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 126 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 178
Score = 36.7 bits (81), Expect = 0.046
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
++ RKLF+GGLS+ETT + LR+++ +G+
Sbjct: 5 KEQFRKLFIGGLSFETTEESLRNYYEQWGK 34
Score = 35.1 bits (77), Expect = 0.14
Identities = 11/36 (30%), Positives = 26/36 (72%)
Frame = +1
Query: 397 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
++ K + K+F+GGLS E +++ +RN++ ++G + +
Sbjct: 2 EREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 37
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+KLFVGG+ +T LRD+F YG+
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGK 125
>BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1-like protein.
Length = 320
Score = 62.5 bits (145), Expect = 8e-10
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 46.4 bits (105), Expect = 6e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 405
IE I + TD +G+ RGFAF+ F +S+DK++ HT+ + +KA
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKA 180
Score = 39.1 bits (87), Expect = 0.009
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RKLF+GGLS+ETT + LR HF +G
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWG 38
Score = 37.1 bits (82), Expect = 0.035
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSASPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA
sequence from clone RP11-78J21 on chromosome
13q32.2-33.3 Contains 2 novel genes, a pseudogene
similar to part of TPTE and ).
Length = 320
Score = 62.5 bits (145), Expect = 8e-10
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DPNT RSRGF F+ + E +D M H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKI 131
Score = 46.4 bits (105), Expect = 6e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 405
IE I + TD +G+ RGFAF+ F +S+DK++ HT+ + +KA
Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKA 180
Score = 39.1 bits (87), Expect = 0.009
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RKLF+GGLS+ETT + LR HF +G
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWG 38
Score = 37.1 bits (82), Expect = 0.035
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSASPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVL 268
+K+FVGG+ +T LRD+F YG+ V+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 61.7 bits (143), Expect = 1e-09
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DP T RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKI 152
Score = 49.2 bits (112), Expect = 8e-06
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I V D +G+ RGFAF+ F +++DK++ HTIN + KKA ++
Sbjct: 152 IETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 204
Score = 39.1 bits (87), Expect = 0.009
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RKLF+GGLS+ETT LR+HF +G
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWG 59
Score = 37.9 bits (84), Expect = 0.020
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1
Query: 391 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
DPK+ + K+F+GGLS E +DD +R F ++GT+ +
Sbjct: 27 DPKEPEQLR-KLFIGGLSFETTDDSLREHFEKWGTLTD 63
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+FVGG+ +T LRD+F YG+
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGK 151
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 61.7 bits (143), Expect = 1e-09
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DP T RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKI 152
Score = 49.2 bits (112), Expect = 8e-06
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I V D +G+ RGFAF+ F +++DK++ HTIN + KKA ++
Sbjct: 152 IETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 204
Score = 39.1 bits (87), Expect = 0.009
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RKLF+GGLS+ETT LR+HF +G
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWG 59
Score = 37.9 bits (84), Expect = 0.020
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1
Query: 391 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
DPK+ + K+F+GGLS E +DD +R F ++GT+ +
Sbjct: 27 DPKEPEQLR-KLFIGGLSFETTDDSLREHFEKWGTLTD 63
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+FVGG+ +T LRD+F YG+
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGK 151
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 61.7 bits (143), Expect = 1e-09
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DP T RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKI 152
Score = 49.2 bits (112), Expect = 8e-06
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I V D +G+ RGFAF+ F +++DK++ HTIN + KKA ++
Sbjct: 152 IETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 204
Score = 39.1 bits (87), Expect = 0.009
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RKLF+GGLS+ETT LR+HF +G
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWG 59
Score = 37.9 bits (84), Expect = 0.020
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1
Query: 391 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
DPK+ + K+F+GGLS E +DD +R F ++GT+ +
Sbjct: 27 DPKEPEQLR-KLFIGGLSFETTDDSLREHFEKWGTLTD 63
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+FVGG+ +T LRD+F YG+
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGK 151
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 61.7 bits (143), Expect = 1e-09
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DP T RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVGG+ + + +R++F ++G I
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKI 152
Score = 49.2 bits (112), Expect = 8e-06
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I V D +G+ RGFAF+ F +++DK++ HTIN + KKA ++
Sbjct: 152 IETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 204
Score = 39.1 bits (87), Expect = 0.009
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RKLF+GGLS+ETT LR+HF +G
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWG 59
Score = 37.9 bits (84), Expect = 0.020
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1
Query: 391 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
DPK+ + K+F+GGLS E +DD +R F ++GT+ +
Sbjct: 27 DPKEPEQLR-KLFIGGLSFETTDDSLREHFEKWGTLTD 63
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+FVGG+ +T LRD+F YG+
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGK 151
>U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous
ribonucleoprotein A0 protein.
Length = 305
Score = 56.0 bits (129), Expect = 7e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 420
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL ++++ ++ FS+FGT+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTV 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+E + D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ G
Sbjct: 124 VEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSG 182
Query: 436 G 438
G
Sbjct: 183 G 183
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYG 253
KLF+GGL+ +T+ LR HF A+G
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFG 31
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGL+ + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein.
Length = 305
Score = 56.0 bits (129), Expect = 7e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 420
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL ++++ ++ FS+FGT+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTV 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+E + D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ G
Sbjct: 124 VEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSG 182
Query: 436 G 438
G
Sbjct: 183 G 183
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYG 253
KLF+GGL+ +T+ LR HF A+G
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFG 31
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGL+ + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 56.0 bits (129), Expect = 7e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 420
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL ++++ ++ FS+FGT+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTV 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+E + D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ G
Sbjct: 124 VEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSG 182
Query: 436 G 438
G
Sbjct: 183 G 183
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYG 253
KLF+GGL+ +T+ LR HF A+G
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFG 31
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGL+ + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 56.0 bits (129), Expect = 7e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 420
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL ++++ ++ FS+FGT+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTV 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+E + D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ G
Sbjct: 124 VEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSG 182
Query: 436 G 438
G
Sbjct: 183 G 183
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYG 253
KLF+GGL+ +T+ LR HF A+G
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFG 31
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGL+ + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 56.0 bits (129), Expect = 7e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 420
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL ++++ ++ FS+FGT+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTV 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+E + D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ G
Sbjct: 124 VEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSG 182
Query: 436 G 438
G
Sbjct: 183 G 183
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYG 253
KLF+GGL+ +T+ LR HF A+G
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFG 31
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGL+ + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 56.0 bits (129), Expect = 7e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 420
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL ++++ ++ FS+FGT+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTV 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+E + D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ G
Sbjct: 124 VEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSG 182
Query: 436 G 438
G
Sbjct: 183 G 183
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYG 253
KLF+GGL+ +T+ LR HF A+G
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFG 31
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGL+ + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 56.0 bits (129), Expect = 7e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 420
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL ++++ ++ FS+FGT+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTV 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+E + D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ G
Sbjct: 124 VEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSG 182
Query: 436 G 438
G
Sbjct: 183 G 183
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYG 253
KLF+GGL+ +T+ LR HF A+G
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFG 31
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGL+ + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 56.0 bits (129), Expect = 7e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 420
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL ++++ ++ FS+FGT+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTV 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+E + D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ G
Sbjct: 124 VEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSG 182
Query: 436 G 438
G
Sbjct: 183 G 183
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYG 253
KLF+GGL+ +T+ LR HF A+G
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFG 31
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGL+ + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 56.0 bits (129), Expect = 7e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 420
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL ++++ ++ FS+FGT+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTV 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+E + D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ G
Sbjct: 124 VEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSG 182
Query: 436 G 438
G
Sbjct: 183 G 183
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYG 253
KLF+GGL+ +T+ LR HF A+G
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFG 31
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGL+ + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 56.0 bits (129), Expect = 7e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 420
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL ++++ ++ FS+FGT+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTV 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+E + D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ G
Sbjct: 124 VEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSG 182
Query: 436 G 438
G
Sbjct: 183 G 183
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYG 253
KLF+GGL+ +T+ LR HF A+G
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFG 31
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGL+ + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 56.0 bits (129), Expect = 7e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 420
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL ++++ ++ FS+FGT+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTV 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+E + D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ G
Sbjct: 124 VEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSG 182
Query: 436 G 438
G
Sbjct: 183 G 183
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYG 253
KLF+GGL+ +T+ LR HF A+G
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFG 31
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGL+ + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 54.4 bits (125), Expect = 2e-07
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------- 420
+ VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++
Sbjct: 133 VQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSR 191
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG + ++++DE+R FFS++G +++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMD 219
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 185 LFVGGLSWETTXKELRDHFGAYGE 256
L V GL W+TT ++L+++F +GE
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGE 129
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 54.4 bits (125), Expect = 2e-07
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------- 420
+ VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++
Sbjct: 133 VQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSR 191
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG + ++++DE+R FFS++G +++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMD 219
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 185 LFVGGLSWETTXKELRDHFGAYGE 256
L V GL W+TT ++L+++F +GE
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGE 129
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 54.4 bits (125), Expect = 2e-07
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------- 420
+ VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++
Sbjct: 133 VQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSR 191
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG + ++++DE+R FFS++G +++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMD 219
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 185 LFVGGLSWETTXKELRDHFGAYGE 256
L V GL W+TT ++L+++F +GE
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGE 129
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 54.4 bits (125), Expect = 2e-07
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------- 420
+ VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++
Sbjct: 133 VQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSR 191
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG + ++++DE+R FFS++G +++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMD 219
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 185 LFVGGLSWETTXKELRDHFGAYGE 256
L V GL W+TT ++L+++F +GE
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGE 129
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 54.4 bits (125), Expect = 2e-07
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------- 420
+ VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++
Sbjct: 133 VQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSR 191
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG + ++++DE+R FFS++G +++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMD 219
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 185 LFVGGLSWETTXKELRDHFGAYGE 256
L V GL W+TT ++L+++F +GE
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGE 129
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 54.4 bits (125), Expect = 2e-07
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------- 420
+ VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++
Sbjct: 133 VQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSR 191
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG + ++++DE+R FFS++G +++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMD 219
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 185 LFVGGLSWETTXKELRDHFGAYGE 256
L V GL W+TT ++L+++F +GE
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGE 129
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 54.4 bits (125), Expect = 2e-07
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------- 420
+ VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++
Sbjct: 133 VQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSR 191
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG + ++++DE+R FFS++G +++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMD 219
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 185 LFVGGLSWETTXKELRDHFGAYGE 256
L V GL W+TT ++L+++F +GE
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGE 129
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 54.4 bits (125), Expect = 2e-07
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------- 420
+ VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++
Sbjct: 133 VQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSR 191
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG + ++++DE+R FFS++G +++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMD 219
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 185 LFVGGLSWETTXKELRDHFGAYGE 256
L V GL W+TT ++L+++F +GE
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGE 129
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 54.4 bits (125), Expect = 2e-07
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------- 420
+ VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++
Sbjct: 133 VQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSR 191
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG + ++++DE+R FFS++G +++
Sbjct: 192 KVFVGRCTGDMTEDELREFFSQYGDVMD 219
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 185 LFVGGLSWETTXKELRDHFGAYGE 256
L V GL W+TT ++L+++F +GE
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGE 129
Score = 29.1 bits (62), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
RK+FVG + + T ELR+ F YG+
Sbjct: 191 RKVFVGRCTGDMTEDELREFFSQYGD 216
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 53.2 bits (122), Expect = 5e-07
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK----------KAKARHG 420
+ D T +SRGF F+ FK P + V+A+ HT++ + +DPK + + + G
Sbjct: 41 IMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
Query: 421 -------------KIFVGGLSSEISDDEIRNFFSEFGTILE 504
KIFVGG+ + E+R +F +FG + E
Sbjct: 101 WQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTE 141
Score = 43.2 bits (97), Expect = 5e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 164 GRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
G D+ KLFVGGL W TT + LR +F YGE
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGE 35
Score = 39.9 bits (89), Expect = 0.005
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 423
D R RGF FI F+ +S+D+ + H I KKV+ K+A+ R K
Sbjct: 147 DAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSK 194
Score = 33.9 bits (74), Expect = 0.33
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
GK+FVGGL + + +R++FS++G +++
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVD 38
>AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion
protein protein.
Length = 454
Score = 53.2 bits (122), Expect = 5e-07
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK----------KAKARHG 420
+ D T +SRGF F+ FK P + V+A+ HT++ + +DPK + + + G
Sbjct: 41 IMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
Query: 421 -------------KIFVGGLSSEISDDEIRNFFSEFGTILE 504
KIFVGG+ + E+R +F +FG + E
Sbjct: 101 WQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTE 141
Score = 43.2 bits (97), Expect = 5e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 164 GRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
G D+ KLFVGGL W TT + LR +F YGE
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGE 35
Score = 33.9 bits (74), Expect = 0.33
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
GK+FVGGL + + +R++FS++G +++
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVD 38
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 53.2 bits (122), Expect = 5e-07
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK----------KAKARHG 420
+ D T +SRGF F+ FK P + V+A+ HT++ + +DPK + + + G
Sbjct: 41 IMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
Query: 421 -------------KIFVGGLSSEISDDEIRNFFSEFGTILE 504
KIFVGG+ + E+R +F +FG + E
Sbjct: 101 WQKGPRSDYSKSNKIFVGGIPHNCGETELREYFKKFGVVTE 141
Score = 43.2 bits (97), Expect = 5e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 164 GRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
G D+ KLFVGGL W TT + LR +F YGE
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGE 35
Score = 39.9 bits (89), Expect = 0.005
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 423
D R RGF FI F+ +S+D+ + H I KKV+ K+A+ R K
Sbjct: 147 DAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSK 194
Score = 33.9 bits (74), Expect = 0.33
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
GK+FVGGL + + +R++FS++G +++
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVD 38
>X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRNA
fragment DNA binding protein UPI homologue
(C-terminus). ).
Length = 196
Score = 52.8 bits (121), Expect = 7e-07
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE I + TDP +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 7 IEVIEIMTDPGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 59
>S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein.
Length = 269
Score = 51.6 bits (118), Expect = 2e-06
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 420
V DP T RSRGF F+ + +D + A ++ + V+PK+A +R
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVTEVDAAIGARPFKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 421 -KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIFVG + + + +R++F ++G I
Sbjct: 126 KKIFVGSIKEDTEEYNLRDYFEKYGKI 152
Score = 47.2 bits (107), Expect = 3e-05
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I V D +G+ RGFA + F +++DK++ HTIN + KKA A+
Sbjct: 152 IETIEVMEDRQSGKKRGFASVTFDDHDTVDKIVVQKYHTINGHNCEVKKALAK 204
Score = 39.1 bits (87), Expect = 0.009
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RKLF+GGLS+ETT LR+HF +G
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWG 59
Score = 37.9 bits (84), Expect = 0.020
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1
Query: 391 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
DPK+ + K+F+GGLS E +DD +R F ++GT+ +
Sbjct: 27 DPKEPEQLR-KLFIGGLSFETTDDSLREHFEKWGTLTD 63
>AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 49.6 bits (113), Expect = 6e-06
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Frame = +1
Query: 313 FIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDE 465
F+ F +DKV+A H +++K +DPK K R KIFVGGLS + ++
Sbjct: 2 FVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVED 61
Query: 466 IRNFFSEFGTI 498
++ +F +FG +
Sbjct: 62 VKQYFEQFGKV 72
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 80 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 124
Score = 30.7 bits (66), Expect = 3.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+FVGGLS TT ++++ +F +G+
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGK 71
>AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 49.6 bits (113), Expect = 6e-06
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Frame = +1
Query: 313 FIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDE 465
F+ F +DKV+A H +++K +DPK K R KIFVGGLS + ++
Sbjct: 2 FVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVED 61
Query: 466 IRNFFSEFGTI 498
++ +F +FG +
Sbjct: 62 VKQYFEQFGKV 72
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 80 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 124
Score = 30.7 bits (66), Expect = 3.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+FVGGLS TT ++++ +F +G+
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGK 71
>AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein.
Length = 180
Score = 49.6 bits (113), Expect = 6e-06
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Frame = +1
Query: 313 FIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDE 465
F+ F +DKV+A H +++K +DPK K R KIFVGGLS + ++
Sbjct: 2 FVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVED 61
Query: 466 IRNFFSEFGTI 498
++ +F +FG +
Sbjct: 62 VKQYFEQFGKV 72
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 80 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 124
Score = 30.7 bits (66), Expect = 3.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+FVGGLS TT ++++ +F +G+
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGK 71
>AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA
sequence from clone RP11-223F20 on chromosome 13
Contains a novel heterogeneous nuclear ribonucleoprotein
family A protein and).
Length = 276
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
IE+I V D +G+ RGFAF+ F + IDK++ HTIN + KKA ++
Sbjct: 49 IETIEVMEDRQSGKKRGFAFVTFDDHDIIDKIVVQKYHTINGHNCEVKKALSK 101
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 48.0 bits (109), Expect = 2e-05
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P DK + TI P
Sbjct: 50 FGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPS 109
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL +S E+ FS++G I+
Sbjct: 110 SASIRDANLYVSGLPKTMSQKEMEQLFSQYGRII 143
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 48.0 bits (109), Expect = 2e-05
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P DK + TI P
Sbjct: 59 FGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPS 118
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL +S E+ FS++G I+
Sbjct: 119 SASIRDANLYVSGLPKTMSQKEMEQLFSQYGRII 152
>AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein.
Length = 318
Score = 48.0 bits (109), Expect = 2e-05
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P DK + TI P
Sbjct: 10 FGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPS 69
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL +S E+ FS++G I+
Sbjct: 70 SASIRDANLYVSGLPKTMSQKEMEQLFSQYGRII 103
>L26405-1|AAA58677.1| 359|Homo sapiens huc protein.
Length = 359
Score = 47.6 bits (108), Expect = 2e-05
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TGR G+ F+ + P DK + TI P
Sbjct: 59 FGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDADKAINTLNGLKLQTKTIKVSYARPS 118
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL +S E+ FS++G I+
Sbjct: 119 SASIRDANLYVSGLPKTMSQKEMEQLFSQYGRII 152
>AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein.
Length = 360
Score = 47.6 bits (108), Expect = 2e-05
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TGR G+ F+ + P DK + TI P
Sbjct: 59 FGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDADKAINTLNGLKLQTKTIKVSYARPS 118
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL +S E+ FS++G I+
Sbjct: 119 SASIRDANLYVSGLPKTMSQKEMEQLFSQYGRII 152
>AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein.
Length = 179
Score = 46.0 bits (104), Expect = 8e-05
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Frame = +1
Query: 322 FKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------KIFVGGLSSEISDDEIRN 474
F +DKV+A H +++K +DPK A R KIFVGGLS + ++++
Sbjct: 2 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQ 61
Query: 475 FFSEFGTI 498
+F +FG +
Sbjct: 62 YFEQFGKV 69
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 77 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 121
Score = 30.7 bits (66), Expect = 3.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+FVGGLS TT ++++ +F +G+
Sbjct: 43 KKIFVGGLSVNTTVEDVKQYFEQFGK 68
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 45.2 bits (102), Expect = 1e-04
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Frame = +1
Query: 298 SRGFAFIVFKAPESIDKVMAAGEHTINNKKV-DPKKAKARHGK-----IFVGGLSSEISD 459
S+ F + ++DKVM + IN+ KV DPK+AKA K IFVGGLS + +
Sbjct: 128 SQASRFALLFKESNVDKVMI--KKNINSWKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPE 185
Query: 460 DEIRNFFSEFGTI 498
++IR +F FG +
Sbjct: 186 EKIREYFGGFGEV 198
Score = 35.9 bits (79), Expect = 0.081
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+FVGGLS +T +++R++FG +GE
Sbjct: 172 KKIFVGGLSPDTPEEKIREYFGGFGE 197
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 59 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 118
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 119 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 59 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 118
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 119 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 66 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 125
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 126 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 66 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 125
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 126 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 59 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 118
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 119 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 66 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 125
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 126 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 66 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 125
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 126 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 83 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 142
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 143 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 176
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 66 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 125
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 126 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 71 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 130
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 131 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 164
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 71 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 130
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 131 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 164
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 66 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 125
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 126 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 66 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 125
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 126 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 83 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 142
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 143 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 176
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 66 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 125
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 126 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 71 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 130
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 131 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 164
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 71 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 130
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 131 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 164
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 66 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 125
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 126 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 66 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 125
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 126 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 83 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 142
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 143 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 176
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 66 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 125
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 126 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 159
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 87 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 146
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 147 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 180
>AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 189
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 59 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 118
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 119 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 59 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 118
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 119 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 59 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 118
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 119 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 152
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKV------MAAGEHTINNKKVDPK 399
F SI IES + D TG+S G+ F+ + P+ +K + TI P
Sbjct: 67 FGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 126
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
A R ++V GL ++ E+ FS++G I+
Sbjct: 127 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRII 160
>BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein.
Length = 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+E + D T R RGF F+ F+ + ++KV H INNK V+ KKA+ +
Sbjct: 32 VEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 84
Score = 31.9 bits (69), Expect = 1.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
R KIFVGGLS+ ++++ +F +FG +
Sbjct: 4 RTKKIFVGGLSANTVVEDVKQYFEQFGKV 32
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE*RVLM*RQIQTQXDHEG 307
+K+FVGGLS T ++++ +F +G+ M +T H G
Sbjct: 6 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRG 48
>AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein
protein.
Length = 544
Score = 41.5 bits (93), Expect = 0.002
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Frame = +1
Query: 256 IESINVKTD--PNTGRSRGFAFIVF-------KAPESID--KVMAAGEHTINNKKVDPKK 402
+ INV D N +S+G F+ F +A ++ KV+ H I K D +K
Sbjct: 101 VYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEK 160
Query: 403 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+G +S + ++++IR FS FG I E
Sbjct: 161 NNVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 194
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
+DRKLF+G +S + T ++R F ++G+
Sbjct: 164 EDRKLFIGMISKKCTENDIRVMFSSFGQ 191
>BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein.
Length = 402
Score = 41.1 bits (92), Expect = 0.002
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARH 417
I + V DP TG +G AF+ + A +S K A + T+ +V P +++R
Sbjct: 71 IYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG 130
Query: 418 G---KIFVGGLSSEISDDEIRNFFSEFGTILE 504
G K+FVG L+ + S++++ F FG I E
Sbjct: 131 GRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
>BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA binding
protein (Drosophila) protein.
Length = 485
Score = 41.1 bits (92), Expect = 0.002
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARH 417
I + V DP TG +G AF+ + A +S K A + T+ +V P +++R
Sbjct: 71 IYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG 130
Query: 418 G---KIFVGGLSSEISDDEIRNFFSEFGTILE 504
G K+FVG L+ + S++++ F FG I E
Sbjct: 131 GRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
>AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like
factor 5 protein.
Length = 481
Score = 41.1 bits (92), Expect = 0.002
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARH 417
I + V DP TG +G AF+ + A +S K A + T+ +V P +++R
Sbjct: 71 IYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG 130
Query: 418 G---KIFVGGLSSEISDDEIRNFFSEFGTILE 504
G K+FVG L+ + S++++ F FG I E
Sbjct: 131 GRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
>AB209067-1|BAD92304.1| 421|Homo sapiens bruno-like 5, RNA binding
protein variant protein.
Length = 421
Score = 41.1 bits (92), Expect = 0.002
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARH 417
I + V DP TG +G AF+ + A +S K A + T+ +V P +++R
Sbjct: 83 IYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG 142
Query: 418 G---KIFVGGLSSEISDDEIRNFFSEFGTILE 504
G K+FVG L+ + S++++ F FG I E
Sbjct: 143 GRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 174
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 40.3 bits (90), Expect = 0.004
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KA 411
I + V D TG +G AF+ + A +S K +A + T+ N+ + K A +
Sbjct: 33 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRG 92
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG L + +D+++R F FGTI E
Sbjct: 93 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 152 AEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
A++ R +DRKLFVG L + T +++R F +G
Sbjct: 86 ADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFG 119
>BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 464
Score = 40.3 bits (90), Expect = 0.004
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KA 411
I + V D TG +G AF+ + A +S K +A + T+ N+ + K A +
Sbjct: 33 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRG 92
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG L + +D+++R F FGTI E
Sbjct: 93 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 152 AEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
A++ R +DRKLFVG L + T +++R F +G
Sbjct: 86 ADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFG 119
>BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein.
Length = 291
Score = 40.3 bits (90), Expect = 0.004
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARH 417
I + V D TG +G AF+ + A +S K +A + T+ +V P +++R
Sbjct: 25 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRG 84
Query: 418 G-KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG L + +D+++R F FGTI E
Sbjct: 85 DRKLFVGMLGKQQTDEDVRKMFEPFGTIDE 114
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 40.3 bits (90), Expect = 0.004
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KA 411
I + V D TG +G AF+ + A +S K +A + T+ N+ + K A +
Sbjct: 33 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRG 92
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG L + +D+++R F FGTI E
Sbjct: 93 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 152 AEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
A++ R +DRKLFVG L + T +++R F +G
Sbjct: 86 ADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFG 119
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 40.3 bits (90), Expect = 0.004
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARH 417
I + V D TG +G AF+ + A +S K +A + T+ +V P +++R
Sbjct: 34 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRG 93
Query: 418 G-KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG L + +D+++R F FGTI E
Sbjct: 94 DRKLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
>AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 415
Score = 40.3 bits (90), Expect = 0.004
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KA 411
I + V D TG +G AF+ + A +S K +A + T+ N+ + K A +
Sbjct: 33 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRG 92
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG L + +D+++R F FGTI E
Sbjct: 93 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 152 AEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
A++ R +DRKLFVG L + T +++R F +G
Sbjct: 86 ADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFG 119
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 40.3 bits (90), Expect = 0.004
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KA 411
I + V D TG +G AF+ + A +S K +A + T+ N+ + K A +
Sbjct: 33 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRG 92
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG L + +D+++R F FGTI E
Sbjct: 93 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 152 AEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
A++ R +DRKLFVG L + T +++R F +G
Sbjct: 86 ADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFG 119
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 40.3 bits (90), Expect = 0.004
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KA 411
I + V D TG +G AF+ + A +S K +A + T+ N+ + K A +
Sbjct: 33 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRG 92
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG L + +D+++R F FGTI E
Sbjct: 93 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 152 AEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
A++ R +DRKLFVG L + T +++R F +G
Sbjct: 86 ADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFG 119
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 39.9 bits (89), Expect = 0.005
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKA 411
I SI V D T RS G+A++ F+ P ++ + I K V DP K+
Sbjct: 12 ILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 71
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 72 GVGNIFIKNLDKSIDNKALYDTFSAFGNIL 101
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 39.9 bits (89), Expect = 0.005
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKA 411
I SI V D T RS G+A++ F+ P ++ + I K V DP K+
Sbjct: 37 ILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 96
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 97 GVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 39.9 bits (89), Expect = 0.005
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKA 411
I SI V D T RS G+A++ F+ P ++ + I K V DP K+
Sbjct: 37 ILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 96
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 97 GVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
>BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein.
Length = 448
Score = 39.9 bits (89), Expect = 0.005
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KA 411
I + V D TG +G AF+ + ES K +A + T+ N+ + K A +
Sbjct: 80 IYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRG 139
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG L+ + S+D++R F FG I E
Sbjct: 140 EDRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 170
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 152 AEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
A++ R +DRKLFVG L+ + + ++R F A+G
Sbjct: 133 ADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFG 166
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 39.9 bits (89), Expect = 0.005
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKA 411
I SI V D T RS G+A++ F+ P ++ + I K V DP K+
Sbjct: 37 ILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 96
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 97 GVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 39.9 bits (89), Expect = 0.005
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKA 411
I SI V D T RS G+A++ F+ P ++ + I K V DP K+
Sbjct: 37 ILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 96
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 97 GVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 39.9 bits (89), Expect = 0.005
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKA 411
I SI V D T RS G+A++ F+ P ++ + I K V DP K+
Sbjct: 37 ILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 96
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 97 GVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
>AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32288 fis, clone PROST2000325, highly similar to
Homo sapiens DAZ associated protein 1 (DAZAP1) mRNA. ).
Length = 289
Score = 39.9 bits (89), Expect = 0.005
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 423
D R RGF FI F+ +S+D+ + H I KKV+ K+A+ R K
Sbjct: 58 DAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSK 105
Score = 36.7 bits (81), Expect = 0.046
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 394 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
P+ ++ KIFVGG+ + E+R +F +FG + E
Sbjct: 16 PRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTE 52
>AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein
BRUNOL4 protein.
Length = 294
Score = 39.9 bits (89), Expect = 0.005
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KA 411
I + V D TG +G AF+ + ES K +A + T+ N+ + K A +
Sbjct: 80 IYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRG 139
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG L+ + S+D++R F FG I E
Sbjct: 140 EDRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 170
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 152 AEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
A++ R +DRKLFVG L+ + + ++R F A+G
Sbjct: 133 ADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFG 166
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Score = 33.1 bits (72), Expect = 0.57
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK--- 423
I S V D N S+G+AF+ F+ E+ DK + +N++KV + K+R +
Sbjct: 125 ILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 424 ----------IFVGGLSSEISDDEIRNFFSEFGTIL 501
+++ E+ D+ ++ FS+FG L
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 399
S+ V DPN G+S+GF F+ ++ E +K + +N K++ K
Sbjct: 219 SVKVMRDPN-GKSKGFGFVSYEKHEDANKAV----EEMNGKEISGK 259
>U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein.
Length = 482
Score = 38.7 bits (86), Expect = 0.012
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Frame = +1
Query: 256 IESINVKTD--PNTGRSRGFAFIVF-------KAPESID--KVMAAGEHTINNKKVDPKK 402
+ INV D N +S+G F+ F +A ++ KV+ H I K D +K
Sbjct: 42 VYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEK 101
Query: 403 AKA-RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A K+F+G +S + ++++IR FS FG I E
Sbjct: 102 NNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Score = 29.9 bits (64), Expect = 5.3
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 131 DSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
DS+ +N+ E DRKLF+G +S + T ++R F ++G+
Sbjct: 98 DSEKNNAVE------DRKLFIGMISKKCTENDIRVMFSSFGQ 133
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Score = 33.1 bits (72), Expect = 0.57
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK--- 423
I S V D N S+G+AF+ F+ E+ DK + +N++KV + K+R +
Sbjct: 125 ILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 424 ----------IFVGGLSSEISDDEIRNFFSEFGTIL 501
+++ E+ D+ ++ FS+FG L
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 399
S+ V DPN G+S+GF F+ ++ E +K + +N K++ K
Sbjct: 219 SVKVMRDPN-GKSKGFGFVSYEKHEDANKAV----EEMNGKEISGK 259
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Score = 33.1 bits (72), Expect = 0.57
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK--- 423
I S V D N S+G+AF+ F+ E+ DK + +N++KV + K+R +
Sbjct: 125 ILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 424 ----------IFVGGLSSEISDDEIRNFFSEFGTIL 501
+++ E+ D+ ++ FS+FG L
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 399
S+ V DPN G+S+GF F+ ++ E +K + +N K++ K
Sbjct: 219 SVKVMRDPN-GKSKGFGFVSYEKHEDANKAV----EEMNGKEISGK 259
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Score = 33.1 bits (72), Expect = 0.57
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK--- 423
I S V D N S+G+AF+ F+ E+ DK + +N++KV + K+R +
Sbjct: 125 ILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 424 ----------IFVGGLSSEISDDEIRNFFSEFGTIL 501
+++ E+ D+ ++ FS+FG L
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 399
S+ V DPN G+S+GF F+ ++ E +K + +N K++ K
Sbjct: 219 SVKVMRDPN-GKSKGFGFVSYEKHEDANKAV----EEMNGKEISGK 259
>BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA
binding protein 1 protein.
Length = 483
Score = 38.7 bits (86), Expect = 0.012
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Frame = +1
Query: 256 IESINVKTD--PNTGRSRGFAFIVF-------KAPESID--KVMAAGEHTINNKKVDPKK 402
+ INV D N +S+G F+ F +A ++ KV+ H I K D +K
Sbjct: 42 VYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEK 101
Query: 403 AKA-RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A K+F+G +S + ++++IR FS FG I E
Sbjct: 102 NNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Score = 29.9 bits (64), Expect = 5.3
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 131 DSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
DS+ +N+ E DRKLF+G +S + T ++R F ++G+
Sbjct: 98 DSEKNNAVE------DRKLFIGMISKKCTENDIRVMFSSFGQ 133
>AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeceptor 116 (GPR116) protein.
Length = 129
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Score = 33.1 bits (72), Expect = 0.57
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK--- 423
I S V D N S+G+AF+ F+ E+ DK + +N++KV + K+R +
Sbjct: 125 ILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 424 ----------IFVGGLSSEISDDEIRNFFSEFGTIL 501
+++ E+ D+ ++ FS+FG L
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 399
S+ V DPN G+S+GF F+ ++ E +K + +N K++ K
Sbjct: 219 SVKVMRDPN-GKSKGFGFVSYEKHEDANKAV----EEMNGKEISGK 259
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Score = 33.1 bits (72), Expect = 0.57
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK--- 423
I S V D N S+G+AF+ F+ E+ DK + +N++KV + K+R +
Sbjct: 125 ILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 424 ----------IFVGGLSSEISDDEIRNFFSEFGTIL 501
+++ E+ D+ ++ FS+FG L
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 399
S+ V DPN G+S+GF F+ ++ E +K + +N K++ K
Sbjct: 219 SVKVMRDPN-GKSKGFGFVSYEKHEDANKAV----EEMNGKEISGK 259
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Score = 33.1 bits (72), Expect = 0.57
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK--- 423
I S V D N S+G+AF+ F+ E+ DK + +N++KV + K+R +
Sbjct: 125 ILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 424 ----------IFVGGLSSEISDDEIRNFFSEFGTIL 501
+++ E+ D+ ++ FS+FG L
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 399
S+ V DPN G+S+GF F+ ++ E +K + +N K++ K
Sbjct: 219 SVKVMRDPN-GKSKGFGFVSYEKHEDANKAV----EEMNGKEISGK 259
>AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleg frame 148 protein.
Length = 129
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Score = 33.1 bits (72), Expect = 0.57
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK--- 423
I S V D N S+G+AF+ F+ E+ DK + +N++KV + K+R +
Sbjct: 125 ILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 424 ----------IFVGGLSSEISDDEIRNFFSEFGTIL 501
+++ E+ D+ ++ FS+FG L
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 399
S+ V DPN G+S+GF F+ ++ E +K + +N K++ K
Sbjct: 219 SVKVMRDPN-GKSKGFGFVSYEKHEDANKAV----EEMNGKEISGK 259
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Score = 33.1 bits (72), Expect = 0.57
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK--- 423
I S V D N S+G+AF+ F+ E+ DK + +N++KV + K+R +
Sbjct: 125 ILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 424 ----------IFVGGLSSEISDDEIRNFFSEFGTIL 501
+++ E+ D+ ++ FS+FG L
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 399
S+ V DPN G+S+GF F+ ++ E +K + +N K++ K
Sbjct: 219 SVKVMRDPN-GKSKGFGFVSYEKHEDANKAV----EEMNGKEISGK 259
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Score = 33.1 bits (72), Expect = 0.57
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK--- 423
I S V D N S+G+AF+ F+ E+ DK + +N++KV + K+R +
Sbjct: 125 ILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 424 ----------IFVGGLSSEISDDEIRNFFSEFGTIL 501
+++ E+ D+ ++ FS+FG L
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 399
S+ V DPN G+S+GF F+ ++ E +K + +N K++ K
Sbjct: 219 SVKVMRDPN-GKSKGFGFVSYEKHEDANKAV----EEMNGKEISGK 259
>AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor
CUG-BP protein.
Length = 486
Score = 38.7 bits (86), Expect = 0.012
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Frame = +1
Query: 256 IESINVKTD--PNTGRSRGFAFIVF-------KAPESID--KVMAAGEHTINNKKVDPKK 402
+ INV D N +S+G F+ F +A ++ KV+ H I K D +K
Sbjct: 42 VYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEK 101
Query: 403 AKA-RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A K+F+G +S + ++++IR FS FG I E
Sbjct: 102 NNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Score = 29.9 bits (64), Expect = 5.3
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 131 DSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
DS+ +N+ E DRKLF+G +S + T ++R F ++G+
Sbjct: 98 DSEKNNAVE------DRKLFIGMISKKCTENDIRVMFSSFGQ 133
>AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A
isoform protein.
Length = 483
Score = 38.7 bits (86), Expect = 0.012
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Frame = +1
Query: 256 IESINVKTD--PNTGRSRGFAFIVF-------KAPESID--KVMAAGEHTINNKKVDPKK 402
+ INV D N +S+G F+ F +A ++ KV+ H I K D +K
Sbjct: 42 VYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEK 101
Query: 403 AKA-RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A K+F+G +S + ++++IR FS FG I E
Sbjct: 102 NNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Score = 29.9 bits (64), Expect = 5.3
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 131 DSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
DS+ +N+ E DRKLF+G +S + T ++R F ++G+
Sbjct: 98 DSEKNNAVE------DRKLFIGMISKKCTENDIRVMFSSFGQ 133
>AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYLQ
isoform protein.
Length = 486
Score = 38.7 bits (86), Expect = 0.012
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Frame = +1
Query: 256 IESINVKTD--PNTGRSRGFAFIVF-------KAPESID--KVMAAGEHTINNKKVDPKK 402
+ INV D N +S+G F+ F +A ++ KV+ H I K D +K
Sbjct: 42 VYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEK 101
Query: 403 AKA-RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A K+F+G +S + ++++IR FS FG I E
Sbjct: 102 NNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Score = 29.9 bits (64), Expect = 5.3
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 131 DSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
DS+ +N+ E DRKLF+G +S + T ++R F ++G+
Sbjct: 98 DSEKNNAVE------DRKLFIGMISKKCTENDIRVMFSSFGQ 133
>AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein
BRUNOL2 protein.
Length = 486
Score = 38.7 bits (86), Expect = 0.012
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Frame = +1
Query: 256 IESINVKTD--PNTGRSRGFAFIVF-------KAPESID--KVMAAGEHTINNKKVDPKK 402
+ INV D N +S+G F+ F +A ++ KV+ H I K D +K
Sbjct: 42 VYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEK 101
Query: 403 AKA-RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
A K+F+G +S + ++++IR FS FG I E
Sbjct: 102 NNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
Score = 29.9 bits (64), Expect = 5.3
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 131 DSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
DS+ +N+ E DRKLF+G +S + T ++R F ++G+
Sbjct: 98 DSEKNNAVE------DRKLFIGMISKKCTENDIRVMFSSFGQ 133
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 38.3 bits (85), Expect = 0.015
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK-- 387
I+SI++ D T + +GFAF+ ++ PE+ ++ VM G + I +
Sbjct: 137 IKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPI 196
Query: 388 VDPKKAKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
+D +AR +I+V + ++SDD+I++ F FG I
Sbjct: 197 IDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKI 234
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 38.3 bits (85), Expect = 0.015
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK-- 387
I+SI++ D T + +GFAF+ ++ PE+ ++ VM G + I +
Sbjct: 155 IKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPI 214
Query: 388 VDPKKAKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
+D +AR +I+V + ++SDD+I++ F FG I
Sbjct: 215 IDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKI 252
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 38.3 bits (85), Expect = 0.015
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T RS G+A++ F+ P ++ + I K + DP K+
Sbjct: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGV 98
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + + FS FG IL
Sbjct: 99 GNVFIKNLDKSIDNKVLYDTFSAFGNIL 126
Score = 33.1 bits (72), Expect = 0.57
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK--- 423
I S V D N S+G+AF+ F+ E+ DK + +N++KV + K+R +
Sbjct: 125 ILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 424 ----------IFVGGLSSEISDDEIRNFFSEFGTIL 501
+++ E+ D+ ++ FS+FG L
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 399
S+ V DPN G+S+GF F+ ++ E +K + +N K++ K
Sbjct: 219 SVKVMRDPN-GKSKGFGFVSYEKHEDANKAV----EEMNGKEISGK 259
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 38.3 bits (85), Expect = 0.015
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKV-------DPKKAKA 411
I SI++ D T RS G+A++ ++ P + + I + V DP K+
Sbjct: 71 ILSISICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKS 130
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + N FS FG IL
Sbjct: 131 GVGNVFIKNLGKTIDNKALYNIFSAFGNIL 160
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 38.3 bits (85), Expect = 0.015
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK-- 387
I+SI++ D T + +GFAF+ ++ PE+ ++ VM G + I +
Sbjct: 112 IKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPI 171
Query: 388 VDPKKAKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
+D +AR +I+V + ++SDD+I++ F FG I
Sbjct: 172 IDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKI 209
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 38.3 bits (85), Expect = 0.015
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK-- 387
I+SI++ D T + +GFAF+ ++ PE+ ++ VM G + I +
Sbjct: 112 IKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPI 171
Query: 388 VDPKKAKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
+D +AR +I+V + ++SDD+I++ F FG I
Sbjct: 172 IDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKI 209
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 38.3 bits (85), Expect = 0.015
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK-- 387
I+SI++ D T + +GFAF+ ++ PE+ ++ VM G + I +
Sbjct: 95 IKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPI 154
Query: 388 VDPKKAKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
+D +AR +I+V + ++SDD+I++ F FG I
Sbjct: 155 IDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKI 192
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 38.3 bits (85), Expect = 0.015
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK-- 387
I+SI++ D T + +GFAF+ ++ PE+ ++ VM G + I +
Sbjct: 138 IKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPI 197
Query: 388 VDPKKAKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
+D +AR +I+V + ++SDD+I++ F FG I
Sbjct: 198 IDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKI 235
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 38.3 bits (85), Expect = 0.015
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK-- 387
I+SI++ D T + +GFAF+ ++ PE+ ++ VM G + I +
Sbjct: 138 IKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPI 197
Query: 388 VDPKKAKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
+D +AR +I+V + ++SDD+I++ F FG I
Sbjct: 198 IDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKI 235
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 38.3 bits (85), Expect = 0.015
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK-- 387
I+SI++ D T + +GFAF+ ++ PE+ ++ VM G + I +
Sbjct: 152 IKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPI 211
Query: 388 VDPKKAKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
+D +AR +I+V + ++SDD+I++ F FG I
Sbjct: 212 IDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKI 249
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 38.3 bits (85), Expect = 0.015
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK-- 387
I+SI++ D T + +GFAF+ ++ PE+ ++ VM G + I +
Sbjct: 155 IKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPI 214
Query: 388 VDPKKAKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
+D +AR +I+V + ++SDD+I++ F FG I
Sbjct: 215 IDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKI 252
>AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340530)
protein.
Length = 200
Score = 37.9 bits (84), Expect = 0.020
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKV-------DPKKAKA 411
I SI + D T RS G+A++ ++ P + + I + V DP K+
Sbjct: 28 ILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKS 87
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + N FS FG IL
Sbjct: 88 GVGNVFIKNLGKTIDNKALYNIFSAFGNIL 117
>AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340529)
protein.
Length = 200
Score = 37.9 bits (84), Expect = 0.020
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKV-------DPKKAKA 411
I SI + D T RS G+A++ ++ P + + I + V DP K+
Sbjct: 28 ILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKS 87
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G +F+ L I + + N FS FG IL
Sbjct: 88 GVGNVFIKNLGKTIDNKALYNIFSAFGNIL 117
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 37.9 bits (84), Expect = 0.020
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKV-------MAAGEHT-INNKKVDPKKAKA 411
I SI V D T RS G+A+I F+ P ++ M G+ I + DP K+
Sbjct: 37 ILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKS 96
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 97 GVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 37.9 bits (84), Expect = 0.020
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKV-------MAAGEHT-INNKKVDPKKAKA 411
I SI V D T RS G+A+I F+ P ++ M G+ I + DP K+
Sbjct: 37 ILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKS 96
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 97 GVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 37.9 bits (84), Expect = 0.020
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKV-------MAAGEHT-INNKKVDPKKAKA 411
I SI V D T RS G+A+I F+ P ++ M G+ I + DP K+
Sbjct: 37 ILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKS 96
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 97 GVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 37.9 bits (84), Expect = 0.020
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKV-------MAAGEHT-INNKKVDPKKAKA 411
I SI V D T RS G+A+I F+ P ++ M G+ I + DP K+
Sbjct: 37 ILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKS 96
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 97 GVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
>BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like
(Drosophila) protein.
Length = 283
Score = 37.5 bits (83), Expect = 0.027
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 373 INNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+NN P+ +IFVGG+ + ++ ++R FFS++G++ E
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKE 61
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 HNSAEAP--GRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
+N AP G ++FVGG+ ++T +LR F YG
Sbjct: 19 NNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYG 57
>AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein.
Length = 289
Score = 37.5 bits (83), Expect = 0.027
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 373 INNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+NN P+ +IFVGG+ + ++ ++R FFS++G++ E
Sbjct: 24 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKE 67
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 HNSAEAP--GRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
+N AP G ++FVGG+ ++T +LR F YG
Sbjct: 25 NNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYG 63
>AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
Homo sapiens germline specific RNA binding protein
(DAZL1) mRNA. ).
Length = 339
Score = 37.5 bits (83), Expect = 0.027
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 373 INNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+NN P+ +IFVGG+ + ++ ++R FFS++G++ E
Sbjct: 24 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKE 67
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 HNSAEAP--GRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
+N AP G ++FVGG+ ++T +LR F YG
Sbjct: 25 NNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYG 63
>AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens
cDNA FLJ25370 fis, clone TST01870. ).
Length = 283
Score = 37.5 bits (83), Expect = 0.027
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 373 INNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+NN P+ +IFVGG+ + ++ ++R FFS++G++ E
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKE 61
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 HNSAEAP--GRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
+N AP G ++FVGG+ ++T +LR F YG
Sbjct: 19 NNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYG 57
>AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein.
Length = 283
Score = 37.5 bits (83), Expect = 0.027
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 373 INNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+NN P+ +IFVGG+ + ++ ++R FFS++G++ E
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKE 61
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 HNSAEAP--GRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
+N AP G ++FVGG+ ++T +LR F YG
Sbjct: 19 NNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYG 57
>AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein.
Length = 283
Score = 37.5 bits (83), Expect = 0.027
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 373 INNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+NN P+ +IFVGG+ + ++ ++R FFS++G++ E
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKE 61
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 HNSAEAP--GRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
+N AP G ++FVGG+ ++T +LR F YG
Sbjct: 19 NNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYG 57
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.046
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH----- 417
+ + ++ D TG+ +G+ F+ F + E D + + K + KA A +
Sbjct: 39 VVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDV 98
Query: 418 -GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
IF+G L EI + + + FS FG IL+
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQ 128
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 378
+++ + DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.046
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH----- 417
+ + ++ D TG+ +G+ F+ F + E D + + K + KA A +
Sbjct: 39 VVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDV 98
Query: 418 -GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
IF+G L EI + + + FS FG IL+
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQ 128
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 378
+++ + DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.046
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH----- 417
+ + ++ D TG+ +G+ F+ F + E D + + K + KA A +
Sbjct: 39 VVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDV 98
Query: 418 -GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
IF+G L EI + + + FS FG IL+
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQ 128
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 378
+++ + DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.046
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH----- 417
+ + ++ D TG+ +G+ F+ F + E D + + K + KA A +
Sbjct: 39 VVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDV 98
Query: 418 -GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
IF+G L EI + + + FS FG IL+
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQ 128
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 378
+++ + DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.046
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH----- 417
+ + ++ D TG+ +G+ F+ F + E D + + K + KA A +
Sbjct: 39 VVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDV 98
Query: 418 -GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
IF+G L EI + + + FS FG IL+
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQ 128
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 378
+++ + DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.046
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH----- 417
+ + ++ D TG+ +G+ F+ F + E D + + K + KA A +
Sbjct: 39 VVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDV 98
Query: 418 -GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
IF+G L EI + + + FS FG IL+
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQ 128
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 378
+++ + DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.046
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHT-INNKKVDPKKAKARH----- 417
+ + ++ D TG+ +G+ F+ F + E D + + + K + KA A +
Sbjct: 39 VVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASAHNKNLDV 98
Query: 418 -GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
IF+G L EI + + + FS FG IL+
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQ 128
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 378
+++ + DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 36.3 bits (80), Expect = 0.061
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 438
D TG+ +G+ F+ F + E D + + K + KA A + IF+G
Sbjct: 4 DRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGN 63
Query: 439 LSSEISDDEIRNFFSEFGTILE 504
L EI + + + FS FG IL+
Sbjct: 64 LDPEIDEKLLYDTFSAFGVILQ 85
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 378
+++ + DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 84 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 126
>AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 36.3 bits (80), Expect = 0.061
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 438
D TG+ +G+ F+ F + E D + + K + KA A + IF+G
Sbjct: 4 DRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGN 63
Query: 439 LSSEISDDEIRNFFSEFGTILE 504
L EI + + + FS FG IL+
Sbjct: 64 LDPEIDEKLLYDTFSAFGVILQ 85
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 378
+++ + DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 84 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 126
>AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein.
Length = 562
Score = 36.3 bits (80), Expect = 0.061
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 188 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 247
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 248 GSIPKSKTKEQILEEFSQ 265
>BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein.
Length = 410
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 36 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 95
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 96 GSIPKSKTKEQILEEFSK 113
>BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein.
Length = 527
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 188 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 247
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 248 GSIPKSKTKEQILEEFSK 265
>BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for
IMAGE:4079825) protein.
Length = 453
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 224 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 283
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 284 GSIPKSKTKEQILEEFSK 301
>BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein.
Length = 417
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 188 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 247
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 248 GSIPKSKTKEQILEEFSK 265
>AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein.
Length = 561
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 188 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 247
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 248 GSIPKSKTKEQILEEFSK 265
>AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein.
Length = 588
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 188 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 247
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 248 GSIPKSKTKEQILEEFSK 265
>AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein.
Length = 623
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 188 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 247
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 248 GSIPKSKTKEQILEEFSK 265
>AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein.
Length = 623
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 188 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 247
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 248 GSIPKSKTKEQILEEFSK 265
>AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein.
Length = 562
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 188 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 247
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 248 GSIPKSKTKEQILEEFSK 265
>AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 623
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 188 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 247
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 248 GSIPKSKTKEQILEEFSK 265
>AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein.
Length = 623
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 188 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 247
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 248 GSIPKSKTKEQILEEFSK 265
>AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 534
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFV 432
I + + DP TG +RG+AF+ F E+ + V H I + K + ++FV
Sbjct: 160 IWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFV 219
Query: 433 GGLSSEISDDEIRNFFSE 486
G + + ++I FS+
Sbjct: 220 GSIPKSKTKEQILEEFSK 237
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 35.5 bits (78), Expect = 0.11
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH--GKIF 429
IESI + D TGRS+G+ FI F E K + +N ++ + K H +
Sbjct: 276 IESIQLMMDSETGRSKGYGFITFSDSECAKKAL----EQLNGFELAGRPMKVGHVTERTD 331
Query: 430 VGGLSSEISDDEIRNFFSEFGT 495
SS + DE+ + GT
Sbjct: 332 ASSASSFLDSDELERTGIDLGT 353
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.11
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH--GKIF 429
IESI + D TGRS+G+ FI F E K + +N ++ + K H +
Sbjct: 276 IESIQLMMDSETGRSKGYGFITFSDSECAKKAL----EQLNGFELAGRPMKVGHVTERTD 331
Query: 430 VGGLSSEISDDEIRNFFSEFGT 495
SS + DE+ + GT
Sbjct: 332 ASSASSFLDSDELERTGIDLGT 353
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 35.5 bits (78), Expect = 0.11
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH--GKIF 429
IESI + D TGRS+G+ FI F E K + +N ++ + K H +
Sbjct: 276 IESIQLMMDSETGRSKGYGFITFSDSECAKKAL----EQLNGFELAGRPMKVGHVTERTD 331
Query: 430 VGGLSSEISDDEIRNFFSEFGT 495
SS + DE+ + GT
Sbjct: 332 ASSASSFLDSDELERTGIDLGT 353
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.11
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH--GKIF 429
IESI + D TGRS+G+ FI F E K + +N ++ + K H +
Sbjct: 254 IESIQLMMDSETGRSKGYGFITFSDSECAKKAL----EQLNGFELAGRPMKVGHVTERTD 309
Query: 430 VGGLSSEISDDEIRNFFSEFGT 495
SS + DE+ + GT
Sbjct: 310 ASSASSFLDSDELERTGIDLGT 331
>BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 35.5 bits (78), Expect = 0.11
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKAR- 414
I + V D TG +G AF+ + ES K +A + T+ +V P +++R
Sbjct: 80 IYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRG 139
Query: 415 ----------HGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
H K+FVG L+ + S+D++R F FG I E
Sbjct: 140 GSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 179
>BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 35.5 bits (78), Expect = 0.11
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKAR- 414
I + V D TG +G AF+ + ES K +A + T+ +V P +++R
Sbjct: 80 IYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRG 139
Query: 415 ----------HGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
H K+FVG L+ + S+D++R F FG I E
Sbjct: 140 GSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 179
>AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor
2D/deleted in azoospermia associated protein 1 fusion p
protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.11
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 304 GFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 423
GF FI F+ +S+D+ + H I KKV+ K+A+ R K
Sbjct: 222 GFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSK 261
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.11
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH--GKIF 429
IESI + D TGRS+G+ FI F E K + +N ++ + K H +
Sbjct: 276 IESIQLMMDSETGRSKGYGFITFSDSECAKKAL----EQLNGFELAGRPMKVGHVTERTD 331
Query: 430 VGGLSSEISDDEIRNFFSEFGT 495
SS + DE+ + GT
Sbjct: 332 ASSASSFLDSDELERTGIDLGT 353
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 35.5 bits (78), Expect = 0.11
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH--GKIF 429
IESI + D TGRS+G+ FI F E K + +N ++ + K H +
Sbjct: 276 IESIQLMMDSETGRSKGYGFITFSDSECAKKAL----EQLNGFELAGRPMKVGHVTERTD 331
Query: 430 VGGLSSEISDDEIRNFFSEFGT 495
SS + DE+ + GT
Sbjct: 332 ASSASSFLDSDELERTGIDLGT 353
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.14
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG 420
+ TD TG S+GF F+ F + E + M GE N +D K K G
Sbjct: 600 IVTDRETGSSKGFGFVDFNSEEDAKEAMEDGEIDGNKVTLDWAKPKGEGG 649
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 35.1 bits (77), Expect = 0.14
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Frame = +1
Query: 295 RSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KARHGKIFVGGLSSE 450
R G AF+ + A +S K +A + T+ N+ + K A + K+FVG L +
Sbjct: 22 RHMGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQ 81
Query: 451 ISDDEIRNFFSEFGTILE 504
+D+++R F FGTI E
Sbjct: 82 QTDEDVRKMFEPFGTIDE 99
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 152 AEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
A++ R +DRKLFVG L + T +++R F +G
Sbjct: 62 ADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFG 95
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 34.7 bits (76), Expect = 0.19
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 408
+ +NV D TGRSRGFAF+ F E ID A E N ++D ++ +
Sbjct: 145 LSGVNVVYDQRTGRSRGFAFVYF---ERIDDSKEAMERA-NGMELDGRRIR 191
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 34.7 bits (76), Expect = 0.19
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYG 253
++ KLFVGGL++ T + L DHF ++G
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFG 30
Score = 33.9 bits (74), Expect = 0.33
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 417
F S I + V D T RSRGF FI F PE M A +N + +D ++ + H
Sbjct: 26 FSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA----MNGESLDGRQIRVDH 81
Score = 31.9 bits (69), Expect = 1.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 409 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+ GK+FVGGL+ + + + FS FG I E
Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISE 34
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 34.7 bits (76), Expect = 0.19
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 408
+ +NV D TGRSRGFAF+ F E ID A E N ++D ++ +
Sbjct: 145 LSGVNVVYDQRTGRSRGFAFVYF---ERIDDSKEAMERA-NGMELDGRRIR 191
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 34.7 bits (76), Expect = 0.19
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYG 253
++ KLFVGGL++ T + L DHF ++G
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFG 30
Score = 33.9 bits (74), Expect = 0.33
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 417
F S I + V D T RSRGF FI F PE M A +N + +D ++ + H
Sbjct: 26 FSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA----MNGESLDGRQIRVDH 81
Score = 31.9 bits (69), Expect = 1.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 409 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+ GK+FVGGL+ + + + FS FG I E
Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISE 34
>AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein
protein.
Length = 318
Score = 34.7 bits (76), Expect = 0.19
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
HGK+F+GGL+ E ++ ++ F++ G +LE
Sbjct: 7 HGKLFIGGLNREANEKVLKEVFAKHGPLLE 36
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 34.7 bits (76), Expect = 0.19
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 408
+ +NV D TGRSRGFAF+ F E ID A E N ++D ++ +
Sbjct: 145 LSGVNVVYDQRTGRSRGFAFVYF---ERIDDSKEAMERA-NGMELDGRRIR 191
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 34.7 bits (76), Expect = 0.19
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 408
+ +NV D TGRSRGFAF+ F E ID A E N ++D ++ +
Sbjct: 145 LSGVNVVYDQRTGRSRGFAFVYF---ERIDDSKEAMERA-NGMELDGRRIR 191
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+G L E ++ EIR+ F ++G +LE
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLE 30
Score = 29.1 bits (62), Expect = 9.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 379 NKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILE 504
N V+ K K++ K+ VG +S ++ E+R F E+G ++E
Sbjct: 64 NINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIE 106
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 33.9 bits (74), Expect = 0.33
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
D+ KLFVGGLS++T + L F YG+
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQ 31
Score = 33.1 bits (72), Expect = 0.57
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
GK+FVGGLS + ++ + FS++G I E
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISE 34
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNKKV 390
I + V D T RSRGF F+ F+ ++ D +MA +++ +++
Sbjct: 32 ISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
R GK+F+GGL++E ++ + F ++G I+E
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVE 36
Score = 32.7 bits (71), Expect = 0.76
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 170 DDDRKLFVGGLSWETTXKELRDHFGAYG 253
D KLF+GGL+ ET K L FG YG
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYG 32
Score = 31.9 bits (69), Expect = 1.3
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 250 R*IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 408
R +E + +K D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 33 RIVEVLLIK-DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 33.9 bits (74), Expect = 0.33
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 354
IESI + D TGRS+G+ FI F E K +
Sbjct: 119 IESIQLMMDSETGRSKGYGFITFSDSECAKKAL 151
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 33.9 bits (74), Expect = 0.33
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
D+ KLFVGGLS++T + L F YG+
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQ 31
Score = 33.1 bits (72), Expect = 0.57
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
GK+FVGGLS + ++ + FS++G I E
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISE 34
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNKKV 390
I + V D T RSRGF F+ F+ ++ D +MA +++ +++
Sbjct: 32 ISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77
>BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein.
Length = 143
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+G L E ++ EIR+ F ++G +LE
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLE 30
Score = 29.1 bits (62), Expect = 9.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 379 NKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILE 504
N V+ K K++ K+ VG +S ++ E+R F E+G ++E
Sbjct: 64 NINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIE 106
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+G L E ++ EIR+ F ++G +LE
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLE 30
Score = 29.1 bits (62), Expect = 9.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 379 NKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILE 504
N V+ K K++ K+ VG +S ++ E+R F E+G ++E
Sbjct: 64 NINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIE 106
>BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein.
Length = 177
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+G L E ++ EIR+ F ++G +LE
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLE 30
Score = 29.1 bits (62), Expect = 9.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 379 NKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILE 504
N V+ K K++ K+ VG +S ++ E+R F E+G ++E
Sbjct: 64 NINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIE 106
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
R GK+F+GGL++E ++ + F ++G I+E
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVE 36
Score = 32.7 bits (71), Expect = 0.76
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 170 DDDRKLFVGGLSWETTXKELRDHFGAYG 253
D KLF+GGL+ ET K L FG YG
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYG 32
Score = 31.9 bits (69), Expect = 1.3
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 250 R*IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 408
R +E + +K D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 33 RIVEVLLIK-DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+G L E ++ EIR+ F ++G +LE
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLE 30
Score = 31.1 bits (67), Expect = 2.3
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +1
Query: 295 RSRGFAFIVFK--APESIDKVMAAGEHTIN-NKKVDPKKAKARHGKIFVGGLSSEISDDE 465
++ GF I K A ++I + H +N N + K+KA K+ VG +S ++ E
Sbjct: 35 KNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSKAST-KLHVGNISPTCTNQE 93
Query: 466 IRNFFSEFGTILE 504
+R F E+G ++E
Sbjct: 94 LRAKFEEYGPVIE 106
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+G L E ++ EIR+ F ++G +LE
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLE 30
Score = 31.1 bits (67), Expect = 2.3
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +1
Query: 295 RSRGFAFIVFK--APESIDKVMAAGEHTIN-NKKVDPKKAKARHGKIFVGGLSSEISDDE 465
++ GF I K A ++I + H +N N + K+KA K+ VG +S ++ E
Sbjct: 35 KNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSKAST-KLHVGNISPTCTNQE 93
Query: 466 IRNFFSEFGTILE 504
+R F E+G ++E
Sbjct: 94 LRAKFEEYGPVIE 106
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 33.9 bits (74), Expect = 0.33
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
D+ KLFVGGLS++T + L F YG+
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQ 31
Score = 33.1 bits (72), Expect = 0.57
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
GK+FVGGLS + ++ + FS++G I E
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISE 34
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNKKV 390
I + V D T RSRGF F+ F+ ++ D +MA +++ +++
Sbjct: 32 ISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 33.9 bits (74), Expect = 0.33
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
D+ KLFVGGLS++T + L F YG+
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQ 31
Score = 33.1 bits (72), Expect = 0.57
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
GK+FVGGLS + ++ + FS++G I E
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISE 34
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNKKV 390
I + V D T RSRGF F+ F+ ++ D +MA +++ +++
Sbjct: 32 ISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+G L E ++ EIR+ F ++G +LE
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLE 30
Score = 29.1 bits (62), Expect = 9.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 379 NKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILE 504
N V+ K K++ K+ VG +S ++ E+R F E+G ++E
Sbjct: 64 NINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIE 106
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
R GK+F+GGL++E ++ + F ++G I+E
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVE 36
Score = 32.7 bits (71), Expect = 0.76
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 170 DDDRKLFVGGLSWETTXKELRDHFGAYG 253
D KLF+GGL+ ET K L FG YG
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYG 32
Score = 31.9 bits (69), Expect = 1.3
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 250 R*IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 408
R +E + +K D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 33 RIVEVLLIK-DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
R GK+F+GGL++E ++ + F ++G I+E
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVE 36
Score = 32.7 bits (71), Expect = 0.76
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 170 DDDRKLFVGGLSWETTXKELRDHFGAYG 253
D KLF+GGL+ ET K L FG YG
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYG 32
Score = 31.9 bits (69), Expect = 1.3
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 250 R*IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 408
R +E + +K D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 33 RIVEVLLIK-DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46566 fis, clone THYMU3040829, moderately
similar to Cold-inducible RNA-binding protein. ).
Length = 135
Score = 33.9 bits (74), Expect = 0.33
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
D+ KLFVGGLS++T + L F YG+
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQ 31
Score = 33.1 bits (72), Expect = 0.57
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
GK+FVGGLS + ++ + FS++G I E
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISE 34
>AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ90115 fis, clone HEMBA1006770, weakly similar to
FLOWERING TIME CONTROL PROTEIN FCA. ).
Length = 484
Score = 33.9 bits (74), Expect = 0.33
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKAR- 414
I + V D TG +G AF+ + ES K +A + T+ +V P +++R
Sbjct: 80 IYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRG 139
Query: 415 ----------HGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
H K+FVG L+ + S++++R F FG I E
Sbjct: 140 GSSCLRQPPSHRKLFVGMLNKQQSEEDVRRLFEAFGNIEE 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,858,541
Number of Sequences: 237096
Number of extensions: 1565640
Number of successful extensions: 12655
Number of sequences better than 10.0: 450
Number of HSP's better than 10.0 without gapping: 11430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12543
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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