Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0718
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 74 7e-14
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 74 7e-14
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 66 2e-11
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 59 2e-09
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 59 2e-09
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 59 2e-09
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 59 2e-09
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 59 2e-09
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 41 4e-04
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 40 8e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 40 8e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 40 8e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.001
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.001
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 39 0.002
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 39 0.002
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 39 0.002
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 39 0.002
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 39 0.002
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 39 0.002
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 39 0.002
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 39 0.002
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 36 0.017
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 36 0.017
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.017
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 36 0.017
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 36 0.022
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 36 0.022
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 35 0.029
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 35 0.029
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 35 0.039
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 34 0.052
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 34 0.052
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 34 0.052
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 34 0.068
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 34 0.068
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 33 0.090
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 33 0.090
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.090
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 33 0.090
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.090
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 33 0.090
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 33 0.090
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 33 0.090
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 33 0.090
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 33 0.090
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 33 0.090
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 33 0.090
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 33 0.090
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 33 0.12
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 33 0.16
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 33 0.16
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 33 0.16
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.16
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.16
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 33 0.16
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.27
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 32 0.27
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 32 0.27
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 32 0.27
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 31 0.36
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 31 0.36
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.48
AF039035-2|AAB94162.1| 304|Caenorhabditis elegans Hypothetical ... 31 0.63
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 30 1.1
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 30 1.1
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 30 1.1
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 29 1.5
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 29 1.5
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 29 1.5
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 29 1.5
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 1.9
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 1.9
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 29 1.9
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 29 1.9
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 29 1.9
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 29 1.9
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.6
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 29 2.6
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 29 2.6
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 29 2.6
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 29 2.6
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 28 4.5
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 4.5
AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical ... 28 4.5
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 27 5.9
AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine re... 27 5.9
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 5.9
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 27 5.9
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 27 7.8
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 27 7.8
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 27 7.8
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 73.7 bits (173), Expect = 7e-14
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFV 432
+ VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FV
Sbjct: 55 VAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFV 114
Query: 433 GGLSSEISDDEIRNFFSEFGTI 498
GGL S+ S+ ++R+ F +FG +
Sbjct: 115 GGLPSDYSEQDLRSHFEQFGKV 136
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 89 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
TDN++NGNA ++ N G ++D+K+FVGG+S E ++L HF YGE
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGE 54
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
++ I D T R FAFIVF+ ES DK + + T ++ D KKA GK F G
Sbjct: 136 VDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 33.1 bits (72), Expect = 0.12
Identities = 10/28 (35%), Positives = 23/28 (82%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
KIFVGG+S E++++++ + F+++G + +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQ 57
Score = 30.7 bits (66), Expect = 0.63
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
+++K+FVGGL + + ++LR HF +G+
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGK 135
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 73.7 bits (173), Expect = 7e-14
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFV 432
+ VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FV
Sbjct: 55 VAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFV 114
Query: 433 GGLSSEISDDEIRNFFSEFGTI 498
GGL S+ S+ ++R+ F +FG +
Sbjct: 115 GGLPSDYSEQDLRSHFEQFGKV 136
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 89 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
TDN++NGNA ++ N G ++D+K+FVGG+S E ++L HF YGE
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGE 54
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
++ I D T R FAFIVF+ ES DK + + T ++ D KKA GK F G
Sbjct: 136 VDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 33.1 bits (72), Expect = 0.12
Identities = 10/28 (35%), Positives = 23/28 (82%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
KIFVGG+S E++++++ + F+++G + +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQ 57
Score = 30.7 bits (66), Expect = 0.63
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
+++K+FVGGL + + ++LR HF +G+
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGK 135
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGK 423
V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK K + K
Sbjct: 76 VMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKK 135
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTI 498
+F+GGLS+ + ++++ +F +G +
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKV 160
Score = 48.0 bits (109), Expect = 4e-06
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 164 GRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
G D K+F+GGLSW+TT + LRD+FG +GE
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGE 70
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+E + D T R RGF F+ F + E DKV H IN K V+ KKA+ +
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E +N D GK+F+GGLS + + + +R++F FG + E
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNE 73
Score = 30.3 bits (65), Expect = 0.84
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+F+GGLS +T ++++ +F YG+
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGK 159
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGK 423
V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK K + K
Sbjct: 76 VMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKK 135
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTI 498
+F+GGLS+ + ++++ +F +G +
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKV 160
Score = 48.0 bits (109), Expect = 4e-06
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 164 GRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
G D K+F+GGLSW+TT + LRD+FG +GE
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGE 70
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+E + D T R RGF F+ F + E DKV H IN K V+ KKA+ +
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 364 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
E +N D GK+F+GGLS + + + +R++F FG + E
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNE 73
Score = 30.3 bits (65), Expect = 0.84
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+F+GGLS +T ++++ +F YG+
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGK 159
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK---- 423
I I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 49 ITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSE 108
Query: 424 -------IFVGGLSSEISDDEIRNFFSEFGTI 498
++V G+ + ++D + +F+++GT+
Sbjct: 109 SNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 140
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
KIFVGGL+S +DD +R F+S+FG I +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITD 51
Score = 33.9 bits (74), Expect = 0.068
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 148 DKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 33.5 bits (73), Expect = 0.090
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 113 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
AENG GD+ S E ++ RK+FVGGL+ TT +R+ + +GE
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGE 48
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK---- 423
I I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 11 ITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSE 70
Query: 424 -------IFVGGLSSEISDDEIRNFFSEFGTI 498
++V G+ + ++D + +F+++GT+
Sbjct: 71 SNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 102
Score = 33.9 bits (74), Expect = 0.068
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 110 DKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK---- 423
I I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 11 ITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSE 70
Query: 424 -------IFVGGLSSEISDDEIRNFFSEFGTI 498
++V G+ + ++D + +F+++GT+
Sbjct: 71 SNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 102
Score = 33.9 bits (74), Expect = 0.068
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 110 DKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK---- 423
I I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 49 ITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSE 108
Query: 424 -------IFVGGLSSEISDDEIRNFFSEFGTI 498
++V G+ + ++D + +F+++GT+
Sbjct: 109 SNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 140
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
KIFVGGL+S +DD +R F+S+FG I +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITD 51
Score = 33.9 bits (74), Expect = 0.068
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 148 DKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 33.5 bits (73), Expect = 0.090
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 113 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
AENG GD+ S E ++ RK+FVGGL+ TT +R+ + +GE
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGE 48
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK---- 423
I I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 49 ITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSE 108
Query: 424 -------IFVGGLSSEISDDEIRNFFSEFGTI 498
++V G+ + ++D + +F+++GT+
Sbjct: 109 SNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 140
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
KIFVGGL+S +DD +R F+S+FG I +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITD 51
Score = 33.9 bits (74), Expect = 0.068
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 148 DKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 33.5 bits (73), Expect = 0.090
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 113 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
AENG GD+ S E ++ RK+FVGGL+ TT +R+ + +GE
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGE 48
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 393
I+S+N+ DP+TG RGFA I F + + +K + H I+ +VD
Sbjct: 51 IQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVD 96
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+++I ++ DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 76 VDAIVIR-DPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 127
Score = 36.3 bits (80), Expect = 0.013
Identities = 11/28 (39%), Positives = 24/28 (85%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGLS + +D+++ N+FS++G +++
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVD 77
Score = 33.5 bits (73), Expect = 0.090
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RKLF+GGLS +TT ++L ++F +G
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWG 73
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+++I ++ DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 96 VDAIVIR-DPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 147
Score = 36.3 bits (80), Expect = 0.013
Identities = 11/28 (39%), Positives = 24/28 (85%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGLS + +D+++ N+FS++G +++
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVD 97
Score = 33.5 bits (73), Expect = 0.090
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RKLF+GGLS +TT ++L ++F +G
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWG 93
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+++I ++ DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 97 VDAIVIR-DPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 148
Score = 36.3 bits (80), Expect = 0.013
Identities = 11/28 (39%), Positives = 24/28 (85%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+F+GGLS + +D+++ N+FS++G +++
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVD 98
Score = 33.5 bits (73), Expect = 0.090
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RKLF+GGLS +TT ++L ++F +G
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWG 94
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH----- 417
+ S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 39 VVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDV 98
Query: 418 -GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
IFVG L E+ + + + FS FG IL+
Sbjct: 99 GANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA 360
+ D ++G S+GFAFI F + E+ D + A
Sbjct: 132 IMRDVDSGTSKGFAFINFASFEASDTALEA 161
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH----- 417
+ S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 49 VVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDV 108
Query: 418 -GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
IFVG L E+ + + + FS FG IL+
Sbjct: 109 GANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA 360
+ D ++G S+GFAFI F + E+ D + A
Sbjct: 142 IMRDVDSGTSKGFAFINFASFEASDTALEA 171
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = +1
Query: 292 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-------GKIFVGGLSSE 450
G S+GF F+ + +KV+A +H I+ ++ D K R +IFVG L+ +
Sbjct: 210 GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDK 269
Query: 451 ISDDEIRNFFSE 486
+ + ++R F +
Sbjct: 270 VDEHQLRKVFGD 281
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 301 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
RGFAF+ + E+ +++++ G T+N V A+ R
Sbjct: 302 RGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKAR 414
S N+ D +T S+G F+ F ++I+ KV+ H + K D + R
Sbjct: 83 SCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+F+G LS + +++ +R F++FG I
Sbjct: 143 --KLFIGQLSKKHNEENLREIFAKFGHI 168
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKAR 414
S N+ D +T S+G F+ F ++I+ KV+ H + K D + R
Sbjct: 83 SCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+F+G LS + +++ +R F++FG I
Sbjct: 143 --KLFIGQLSKKHNEENLREIFAKFGHI 168
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKAR 414
S N+ D +T S+G F+ F ++I+ KV+ H + K D + R
Sbjct: 83 SCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+F+G LS + +++ +R F++FG I
Sbjct: 143 --KLFIGQLSKKHNEENLREIFAKFGHI 168
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKAR 414
S N+ D +T S+G F+ F ++I+ KV+ H + K D + R
Sbjct: 83 SCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+F+G LS + +++ +R F++FG I
Sbjct: 143 --KLFIGQLSKKHNEENLREIFAKFGHI 168
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKAR 414
S N+ D +T S+G F+ F ++I+ KV+ H + K D + R
Sbjct: 83 SCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+F+G LS + +++ +R F++FG I
Sbjct: 143 --KLFIGQLSKKHNEENLREIFAKFGHI 168
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKAR 414
S N+ D +T S+G F+ F ++I+ KV+ H + K D + R
Sbjct: 83 SCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+F+G LS + +++ +R F++FG I
Sbjct: 143 --KLFIGQLSKKHNEENLREIFAKFGHI 168
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKAR 414
S N+ D +T S+G F+ F ++I+ KV+ H + K D + R
Sbjct: 83 SCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
K+F+G LS + +++ +R F++FG I
Sbjct: 143 --KLFIGQLSKKHNEENLREIFAKFGHI 168
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 35.9 bits (79), Expect = 0.017
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAAGEHTINNKKVD-----PK 399
F SI IES + D TG+S G+ F+ + + +++ V + + NK + P
Sbjct: 62 FTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPS 121
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
+ + ++V G+ ++ E+ + F FG I+
Sbjct: 122 NDQIKGSNLYVSGIPKSMTLHELESIFRPFGQII 155
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.017
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T S G+A++ F+ P ++ M ++ K + DP ++
Sbjct: 60 SIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGA 119
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + I + FS FG IL
Sbjct: 120 GNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPE 336
I S V TD N GRS+GF F+ F+ PE
Sbjct: 343 ITSAKVMTDEN-GRSKGFGFVCFEKPE 368
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.017
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D T S G+A++ F+ P ++ M ++ K + DP ++
Sbjct: 60 SIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGA 119
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + I + FS FG IL
Sbjct: 120 GNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPE 336
I S V TD N GRS+GF F+ F+ PE
Sbjct: 343 ITSAKVMTDEN-GRSKGFGFVCFEKPE 368
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 35.9 bits (79), Expect = 0.017
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RK+FVGG+ W+ T L+D FG +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGT 495
KIFVGG+ +I++ +++ F EFG+
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS 320
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 35.5 bits (78), Expect = 0.022
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 408
+E++ + D +TG+ +GFAF+ FK S+ +A TI +K D + K
Sbjct: 273 VEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LALSMETIKMEKRDLRITK 321
Score = 34.7 bits (76), Expect = 0.039
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +1
Query: 313 FIVFKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRN 474
++ F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 475 FFS 483
FFS
Sbjct: 265 FFS 267
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTI 498
+FVG + +++ +R FS+FGTI
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTI 169
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 35.5 bits (78), Expect = 0.022
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 146 NSAEAPGRDDD--RKLFVGGLSWETTXKELRDHFGAYGE 256
N AE P +D R LFVG +++ET+ +LR F AYG+
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGK 129
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 35.1 bits (77), Expect = 0.029
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D + S G+A++ F+ P ++ + I+ + + DP +A +
Sbjct: 85 SIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGN 144
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 145 GNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
Score = 30.3 bits (65), Expect = 0.84
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPE 336
F S I S V D N GRS+GF F+ F+ PE
Sbjct: 363 FSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTI 498
++V + +++DD +R+ FS FGTI
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTI 369
Score = 27.5 bits (58), Expect = 5.9
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES----IDKV--MAAGEHTINNKKVDPKKAKAR- 414
I S V TD + G S+G+ F+ F+ S I+KV M + + K P+ + +
Sbjct: 171 ILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKE 229
Query: 415 -------HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
+ +FV + +++ FS+FG I
Sbjct: 230 LGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 35.1 bits (77), Expect = 0.029
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARH 417
SI V D + S G+A++ F+ P ++ + I+ + + DP +A +
Sbjct: 85 SIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGN 144
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
G IF+ L I + + + FS FG IL
Sbjct: 145 GNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
Score = 30.3 bits (65), Expect = 0.84
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPE 336
F S I S V D N GRS+GF F+ F+ PE
Sbjct: 363 FSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTI 498
++V + +++DD +R+ FS FGTI
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTI 369
Score = 27.5 bits (58), Expect = 5.9
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES----IDKV--MAAGEHTINNKKVDPKKAKAR- 414
I S V TD + G S+G+ F+ F+ S I+KV M + + K P+ + +
Sbjct: 171 ILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKE 229
Query: 415 -------HGKIFVGGLSSEISDDEIRNFFSEFGTI 498
+ +FV + +++ FS+FG I
Sbjct: 230 LGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 34.7 bits (76), Expect = 0.039
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 149 SAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+AE + D R ++VG + W++T E+ +HF G+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGK 71
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 390
+ + + D TG + FAF+ F+ ES+ + N+K+
Sbjct: 72 VARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLSGTMFRNRKI 116
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 34.3 bits (75), Expect = 0.052
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK---- 423
+E +++KT NT + +AF++F+ + + A E + + K +GK
Sbjct: 195 VEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVS 250
Query: 424 --IFVGGLSSEISDDEIRNFFSEFGTI 498
+FVGGL S + ++ F EFG +
Sbjct: 251 RRLFVGGLGSWCDKEILQKAFGEFGFV 277
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTILE 504
+FVG + S++ + EIR+ F E G + E
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEE 197
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 34.3 bits (75), Expect = 0.052
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK---- 423
+E +++KT NT + +AF++F+ + + A E + + K +GK
Sbjct: 195 VEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVS 250
Query: 424 --IFVGGLSSEISDDEIRNFFSEFGTI 498
+FVGGL S + ++ F EFG +
Sbjct: 251 RRLFVGGLGSWCDKEILQKAFGEFGFV 277
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTILE 504
+FVG + S++ + EIR+ F E G + E
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEE 197
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 34.3 bits (75), Expect = 0.052
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK---- 423
+E +++KT NT + +AF++F+ + + A E + + K +GK
Sbjct: 172 VEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVS 227
Query: 424 --IFVGGLSSEISDDEIRNFFSEFGTI 498
+FVGGL S + ++ F EFG +
Sbjct: 228 RRLFVGGLGSWCDKEILQKAFGEFGFV 254
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTILE 504
+FVG + S++ + EIR+ F E G + E
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEE 174
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 33.9 bits (74), Expect = 0.068
Identities = 12/46 (26%), Positives = 30/46 (65%)
Frame = +1
Query: 367 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG + E
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSE 163
Score = 31.9 bits (69), Expect = 0.27
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
D+ ++VG +S +TT +LRD F YG+
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGD 262
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 33.9 bits (74), Expect = 0.068
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
K+FVGGL S + + +I NFFS +G +
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRL 114
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 33.5 bits (73), Expect = 0.090
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 325 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K +++ M +++ PK K K+F+G LS + S+DE+R F+ FG + E
Sbjct: 94 KTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDE 152
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 140 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
D A + DD+KLF+G LS + + E+R F +GE
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG + + + ++R+ F +FG I E
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYE 57
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 33.5 bits (73), Expect = 0.090
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
RH +FVG LSSE+ + ++R F FG +
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDV 48
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTILE 504
++VG ++S +++DEIR F+ FG I E
Sbjct: 130 VYVGNIAS-LTEDEIRQGFASFGRITE 155
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.090
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
RH +FVG LSSE+ + ++R F FG +
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDV 58
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTILE 504
++VG ++S +++DEIR F+ FG I E
Sbjct: 140 VYVGNIAS-LTEDEIRQGFASFGRITE 165
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 33.5 bits (73), Expect = 0.090
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
RH +FVG LSSE+ + ++R F FG +
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDV 161
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTILE 504
++VG ++S +++DEIR F+ FG I E
Sbjct: 243 VYVGNIAS-LTEDEIRQGFASFGRITE 268
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.090
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 412 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
RH +FVG LSSE+ + ++R F FG +
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDV 129
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTILE 504
++VG ++S +++DEIR F+ FG I E
Sbjct: 211 VYVGNIAS-LTEDEIRQGFASFGRITE 236
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 33.5 bits (73), Expect = 0.090
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 325 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K +++ M +++ PK K K+F+G LS + S+DE+R F+ FG + E
Sbjct: 94 KTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDE 152
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 140 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
D A + DD+KLF+G LS + + E+R F +GE
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG + + + ++R+ F +FG I E
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYE 57
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 33.5 bits (73), Expect = 0.090
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 397 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
K +RH +FVG L SEI ++R F +FG + E
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSE 160
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 367 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
H + K D +A A + ++VG +++ + +DEIR F FG I E
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINE 283
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 33.5 bits (73), Expect = 0.090
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 367 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
HT+ + + K+FVGG+S ++ I FF +FGT+
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
H +F+GGL ++ +EI FSEFG +L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVL 346
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 33.5 bits (73), Expect = 0.090
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 367 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
HT+ + + K+FVGG+S ++ I FF +FGT+
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
H +F+GGL ++ +EI FSEFG +L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVL 346
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 33.5 bits (73), Expect = 0.090
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 367 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
HT+ + + K+FVGG+S ++ I FF +FGT+
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
H +F+GGL ++ +EI FSEFG +L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVL 346
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 33.5 bits (73), Expect = 0.090
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES 339
I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 128 IKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 33.5 bits (73), Expect = 0.090
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES 339
I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 128 IKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 33.5 bits (73), Expect = 0.090
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES 339
I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 128 IKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 415 HGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
H +F+GGL ++ +EI FSEFG +L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVL 132
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTIL 501
+FVG +S ++S+D IR+ FS+ G +L
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVL 45
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Frame = +1
Query: 301 RGFAFIVFKAPESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLS 444
RGFA++V + + + + + + + DP+K K+FV +
Sbjct: 632 RGFAYVVMENDQKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVH 691
Query: 445 SEISDDEIRNFFSEFGTI 498
+ +DDE++ FS+FGT+
Sbjct: 692 FQATDDELKALFSKFGTV 709
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 158 APGRDDDRKLFVGGLSWETTXKELR 232
APG +D R +FV L + TT E+R
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIR 610
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+ +IN+ D +TG+S+GFAF+ +K S ++A N + + + H + +
Sbjct: 64 VMNINLIRDKDTGKSKGFAFLCYKDQRS--TILAV--DNFNGISLHKRMIRVDHVEEYKV 119
Query: 436 GLSSEISDDEIRNFFSE 486
E +DDE + + E
Sbjct: 120 PKYKEDADDETKRLWEE 136
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTIL 501
I++GGLS +S+ ++ FS++G ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVM 65
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 394 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 394 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 394 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKARHGKIFV 432
I + + DP +G SRG+AF+ + E + H I+ K + ++F+
Sbjct: 226 IWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFI 285
Query: 433 GGLSSEISDDEI 468
G + S DEI
Sbjct: 286 GNIPKTKSKDEI 297
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 107 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
G GGG + + + L V LS TT K+LRD FG +GE
Sbjct: 52 GGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGE 101
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPE 336
I S V TD N GRS+GF F+ F+ PE
Sbjct: 283 ITSAKVMTDEN-GRSKGFGFVCFEKPE 308
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPE 336
I S V TD N GRS+GF F+ F+ PE
Sbjct: 280 ITSAKVMTDEN-GRSKGFGFVCFEKPE 305
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 391 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
DP ++ G IF+ L I + I + FS FG IL
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 84
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.27
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
KIFVGGL SD + +F +FG I E
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEE 63
Score = 30.7 bits (66), Expect = 0.63
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 134 SQDHNSAEAPGRDDDR--KLFVGGLSWETTXKELRDHFGAYGE 256
+Q N+ G D K+FVGGL + T+ K L ++F +G+
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGD 60
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 354
F SI I ++ + D TGR RGFAFI F S + +
Sbjct: 25 FSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 31.5 bits (68), Expect = 0.36
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 104 NGNAENGGG-DSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
+G+A +GG D D + A DDRK+ V +S + T +L+ F YG+
Sbjct: 86 DGDAFDGGETDDFDASIAFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGK 137
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 349 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 501
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
RK+F+GGL + + +++ FGA+G+
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGK 270
>AF039035-2|AAB94162.1| 304|Caenorhabditis elegans Hypothetical
protein C53A3.1 protein.
Length = 304
Score = 30.7 bits (66), Expect = 0.63
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 235 SFWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
SFW +N +TDP+T F FI + P+ + KVM T++ +D +
Sbjct: 137 SFWIDELRRLVNFRTDPHT--YYNFNFIPYDEPKQLMKVMTFLNETLS---IDHVEIMMD 191
Query: 415 HGKIF 429
H K+F
Sbjct: 192 HDKLF 196
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
K++VGGL S+ + E+ F FG I
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRI 29
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
K++VGGL S+ + E+ F FG I
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRI 29
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
K++VGGL S+ + E+ F FG I
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRI 29
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 164 GRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
G +D+K++VG L + KE+ D F YG
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYG 33
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 164 GRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
G +D+K++VG L + KE+ D F YG
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYG 33
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 197 GLSWETTXKELRDHFGAYG 253
GL WE T +ELRD FG G
Sbjct: 11 GLPWEATEQELRDFFGNNG 29
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 197 GLSWETTXKELRDHFGAYG 253
GL WE T +ELRD FG G
Sbjct: 11 GLPWEATEQELRDFFGNNG 29
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +2
Query: 101 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
+N N + SQ + E D + ++VG + + T +E+ HF G
Sbjct: 52 MNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCG 102
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 184
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 184
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 29.1 bits (62), Expect = 1.9
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIF+GGL + +++D+++ FG +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPL 317
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 29.1 bits (62), Expect = 1.9
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIF+GGL + +++D+++ FG +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPL 317
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 29.1 bits (62), Expect = 1.9
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIF+GGL + +++D+++ FG +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPL 292
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 29.1 bits (62), Expect = 1.9
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIF+GGL + +++D+++ FG +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPL 295
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
+I++G L+S +S+ +I +FF +G I
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQI 29
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
+I++G L+S +S+ +I +FF +G I
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQI 29
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
+I++G L+S +S+ +I +FF +G I
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQI 29
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHF 241
++FVGG TT ELR+HF
Sbjct: 67 RIFVGGFPTSTTETELREHF 86
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESI 342
F ++ + + + TD TGRS+G ++ F ES+
Sbjct: 45 FSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESI 342
F ++ + + + TD TGRS+G ++ F ES+
Sbjct: 190 FSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHF 241
++FVGG TT ELR+HF
Sbjct: 68 RIFVGGFPTSTTETELREHF 87
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVF 324
+ ++ + D TGR RGFAF+ F
Sbjct: 30 VSNVRIVCDRETGRPRGFAFVEF 52
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVF 324
F ++ + ++ + D TGR RGFAF+ F
Sbjct: 26 FAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical
protein B0001.3b protein.
Length = 575
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 80 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
D+ N+ N ++ + GGDS + E DDD
Sbjct: 416 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 448
>Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3a protein.
Length = 591
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 80 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
D+ N+ N ++ + GGDS + E DDD
Sbjct: 432 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 464
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 298 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 417
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
>AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical
protein Y110A2AL.5 protein.
Length = 246
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -2
Query: 235 ITELLXCGLPAQPTNKKFSVVIASWGLSTVMILRITATVLCISIKLVVGG 86
+T + C P QP + S+V+ W + + R A CI L + G
Sbjct: 137 LTLVNPCPAPGQPFRRTESLVVCIWTFNETVATREEAKTFCIGKGLKLTG 186
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 361 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
G+HT + + K +FVG +S + SD+ IR +E G +
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNV 73
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 361 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
G+HT + + K +FVG +S + SD+ IR +E G +
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNV 73
>AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine
receptor, class w protein95 protein.
Length = 363
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 138 CESPPPFSAFPLSWLSVVIS 79
CE P P S F + W++VVI+
Sbjct: 107 CEPPAPLSFFYMYWINVVIN 126
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 275 RQIQTQXDHEGLPSLCLR 328
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
+++VGG S+ +S ++IRN ++ E
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFE 37
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 27.1 bits (57), Expect = 7.8
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
D + +F+G + + +T +E+ +HF G+
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQ 80
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 416 CRALAFFGSTFLLLMVCSPAAMTLSIDSGALNTMKANPRDLPV 288
C + F G T L LM +P + L I SGA+ K + LPV
Sbjct: 213 CLSALFSGLT-LGLMSLTPQELELVIKSGAIKEQKCAAKILPV 254
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +2
Query: 113 AENGGGDSQDHNSAEAPGRDDDR---KLFVG 196
AE GGG+S D +S D+R KLFVG
Sbjct: 603 AELGGGNSNDDDSMSGSNSADEREPYKLFVG 633
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,242,423
Number of Sequences: 27780
Number of extensions: 234018
Number of successful extensions: 964
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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