Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0713
         (645 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0756 + 19314669-19315085                                         30   1.8  
01_06_1089 - 34451982-34452670,34452755-34452814,34453287-344533...    29   4.2  
11_02_0047 + 7716315-7716420,7716518-7716647,7716785-7716856,771...    28   5.5  
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580...    28   7.3  
02_01_0336 + 2397648-2397812,2398367-2398441,2398860-2398975,239...    28   7.3  

>04_03_0756 + 19314669-19315085
          Length = 138

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 54  GYRIVTGYPFHLYK*PQMLRLVPNF*NPTFGVFVDCIVFFF 176
           G R       H Y   QM +++P     TFGVF +C  +FF
Sbjct: 87  GIRFAFTAAMHYYHCTQM-QMMPELTRTTFGVFYNCFHYFF 126


>01_06_1089 -
           34451982-34452670,34452755-34452814,34453287-34453352,
           34454055-34454253,34454470-34454719,34454830-34454898,
           34455733-34455804,34456027-34456168,34456544-34457064,
           34457166-34457739,34459164-34459269
          Length = 915

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 374 VKTALDYFYDFFPEELFSEICEYTSMYSVQESGRSLNVSIEKCA 243
           V+T++    DF PEE+FS  C      S Q+  R+    + +C+
Sbjct: 565 VETSIAESKDFLPEEIFS--CHGRDNISTQKPHRAAGYGVRRCS 606


>11_02_0047 +
           7716315-7716420,7716518-7716647,7716785-7716856,
           7717007-7717078,7717274-7717345,7717684-7717845,
           7718105-7718176,7718435-7718503,7718788-7718859,
           7718992-7719129,7719386-7719888,7720007-7720171,
           7720267-7720403,7720488-7720707,7720793-7721028,
           7721165-7721632
          Length = 897

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 67  LPDIRFISINNPRCSGSYQIFKTPLSGXSWIVL 165
           LP +RF+S+NN R +GS       LS   W+ L
Sbjct: 145 LPKLRFLSLNNNRFTGSIPPSIGNLSNMYWLDL 177


>03_05_0725 +
           27155736-27155746,27155798-27155949,27156108-27158068,
           27159169-27159397,27159506-27159634,27159725-27159838,
           27160059-27160258,27160301-27160599,27160713-27160923,
           27161017-27161172,27161290-27161447,27161532-27161724,
           27162015-27162406,27162537-27162717,27162802-27163031,
           27163108-27163753,27163833-27163902,27163994-27164244
          Length = 1860

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 358 IISTTFFQKNYFLKFVNIQACIRSKNQDVR*TCLLRNAHIYSDQ 227
           I  T    ++YF+KF+ +    R   QD    C L  A +Y DQ
Sbjct: 349 IAQTNIPFQDYFVKFIELDKITRGWAQDRSAQCSLFLAELYYDQ 392


>02_01_0336 +
           2397648-2397812,2398367-2398441,2398860-2398975,
           2399155-2399269,2399360-2399488,2399809-2399856,
           2400369-2400448,2400628-2400824,2400916-2401202,
           2401281-2401307,2401353-2401538,2401633-2402094,
           2402201-2402350,2402612-2402687,2402851-2402978,
           2403244-2403435,2403559-2403690,2403767-2403889,
           2404128-2404346,2404518-2404679
          Length = 1022

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -2

Query: 362 LDYFYDFFPEELFSEICEYTSMYSVQESGRSLNVSIEKCAHL*RSNFLWALQHFHHI 192
           +D  Y F  EEL  ++CE   +   +E    L  S  +      S  +W +  F HI
Sbjct: 158 VDGTYQFNLEELVPKLCELAQIVKAEEKDNMLRASTLQAL----SAMIWFMGEFSHI 210


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,626,814
Number of Sequences: 37544
Number of extensions: 332406
Number of successful extensions: 670
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)