Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0713
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001374-1|AAN71129.1|  697|Drosophila melanogaster GH01059p pro...    28   9.4  
AY089558-1|AAL90296.1| 1063|Drosophila melanogaster LD45706p pro...    28   9.4  
AJ249178-1|CAB53566.1| 1063|Drosophila melanogaster chromosomal ...    28   9.4  
AF190557-1|AAF01341.1| 1063|Drosophila melanogaster chromosomal ...    28   9.4  
AF179361-2|AAD55780.1| 1063|Drosophila melanogaster embargoed pr...    28   9.4  
AF179360-1|AAD55778.1| 1063|Drosophila melanogaster embargoed pr...    28   9.4  
AE014134-1501|AAG22423.2| 1063|Drosophila melanogaster CG13387-P...    28   9.4  

>BT001374-1|AAN71129.1|  697|Drosophila melanogaster GH01059p
           protein.
          Length = 697

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -2

Query: 527 INEENSRTKPHNQARHAVRKKQLNLNFKWTTGRFQHRADIENDKFFHPIPDVKTALDY 354
           +N  N   +P  +  H V+K+ LNL  +W +    ++  ++N  F  P+ D    LDY
Sbjct: 360 VNGVNVNNQPLIKTMHVVKKETLNLISEWVSRSNDNQLVMDN--FIPPLLDA-ILLDY 414


>AY089558-1|AAL90296.1| 1063|Drosophila melanogaster LD45706p
           protein.
          Length = 1063

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -2

Query: 527 INEENSRTKPHNQARHAVRKKQLNLNFKWTTGRFQHRADIENDKFFHPIPDVKTALDY 354
           +N  N   +P  +  H V+K+ LNL  +W +    ++  ++N  F  P+ D    LDY
Sbjct: 726 VNGVNVNNQPLIKTMHVVKKETLNLISEWVSRSNDNQLVMDN--FIPPLLDA-ILLDY 780


>AJ249178-1|CAB53566.1| 1063|Drosophila melanogaster chromosomal
           region maintenance1 protein protein.
          Length = 1063

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -2

Query: 527 INEENSRTKPHNQARHAVRKKQLNLNFKWTTGRFQHRADIENDKFFHPIPDVKTALDY 354
           +N  N   +P  +  H V+K+ LNL  +W +    ++  ++N  F  P+ D    LDY
Sbjct: 726 VNGVNVNNQPLIKTMHVVKKETLNLISEWVSRSNDNQLVMDN--FIPPLLDA-ILLDY 780


>AF190557-1|AAF01341.1| 1063|Drosophila melanogaster chromosomal
           region maintenanceprotein CRM1 protein.
          Length = 1063

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -2

Query: 527 INEENSRTKPHNQARHAVRKKQLNLNFKWTTGRFQHRADIENDKFFHPIPDVKTALDY 354
           +N  N   +P  +  H V+K+ LNL  +W +    ++  ++N  F  P+ D    LDY
Sbjct: 726 VNGVNVNNQPLIKTMHVVKKETLNLISEWVSRSNDNQLVMDN--FIPPLLDA-ILLDY 780


>AF179361-2|AAD55780.1| 1063|Drosophila melanogaster embargoed
           protein.
          Length = 1063

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -2

Query: 527 INEENSRTKPHNQARHAVRKKQLNLNFKWTTGRFQHRADIENDKFFHPIPDVKTALDY 354
           +N  N   +P  +  H V+K+ LNL  +W +    ++  ++N  F  P+ D    LDY
Sbjct: 726 VNGVNVNNQPLIKTMHVVKKETLNLISEWVSRSNDNQLVMDN--FIPPLLDA-ILLDY 780


>AF179360-1|AAD55778.1| 1063|Drosophila melanogaster embargoed
           protein.
          Length = 1063

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -2

Query: 527 INEENSRTKPHNQARHAVRKKQLNLNFKWTTGRFQHRADIENDKFFHPIPDVKTALDY 354
           +N  N   +P  +  H V+K+ LNL  +W +    ++  ++N  F  P+ D    LDY
Sbjct: 726 VNGVNVNNQPLIKTMHVVKKETLNLISEWVSRSNDNQLVMDN--FIPPLLDA-ILLDY 780


>AE014134-1501|AAG22423.2| 1063|Drosophila melanogaster CG13387-PA
           protein.
          Length = 1063

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -2

Query: 527 INEENSRTKPHNQARHAVRKKQLNLNFKWTTGRFQHRADIENDKFFHPIPDVKTALDY 354
           +N  N   +P  +  H V+K+ LNL  +W +    ++  ++N  F  P+ D    LDY
Sbjct: 726 VNGVNVNNQPLIKTMHVVKKETLNLISEWVSRSNDNQLVMDN--FIPPLLDA-ILLDY 780


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,036,671
Number of Sequences: 53049
Number of extensions: 569418
Number of successful extensions: 1205
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)